Os01g0625900

From RiceWiki
Revision as of 18:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0625900

Description

Protein of unknown function DUF623, plant domain containing protein

Version

NM_001050159.1 GI:115438688 GeneID:4326686

Length

1398 bp

Definition

Oryza sativa Japonica Group Os01g0625900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26638115..26639512

Sequence Coding Region

26638343..26639443

Expression

GEO Profiles:Os01g0625900

Genome Context

<gbrowseImage1> name=NC_008394:26638115..26639512 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26638115..26639512 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacacgcctttcgtggacaagagcccccaccgccgcctcgacggcttgggcgccggtggctggctgaagcagaggctggctcagatcctagtgcgatctacttgcaccaccaacaccaccaccacgacaacgaccacctcgtccacggccttcgtcagcctcgacaagaccaatgccgacacgcaccaagaaccgccgccgccgccctcgccgtacttctgcaccccctgcacctaccagaggcccaagcttgatgcccccggccgtccccgccgacgccgacgcagcgcgtcgctggtccacatctccatcgactgcaccggcggggccggggccacctccggccgccgctccgtccactccgacgcgcccctcctgccgtactcgtcgtcgttgccgacgaaggatggcaggaaacagagcagggcgaggagaaaggcgcgctcttcgccgtcgacatccaggcggcattgcccgtcgtcctcctggggccgcgcgcggctcccgaggggggcaccggggcagtacagctcctcgtcgtccacggtgaccgacgacgagctcgcgccgttcagcaccgacgaggagggcggcgaggaggccgacacgaggacgctcttctcgtccctcagcttctcctccgactccacctcggagttctaccacaccaacagcagcagcagcctcgccaggaagggccacaagaacgcgccggcgcgccgcccgccggcgcggcgcgcgtcggcgaggatcaccagcgacccggccgacgccttccggccggtggtatccgtggcggcgacgaagaagcagcacaacgacatgaagaagaaggaggagacggcgatcaagaggcagctgggcacggacgacgacaccgccgccggcgcgggcatggcggtggtgaagcggtcgagcaacccgtacgccgacttccggagctcgatggtggagatggtcgtggagcggcgcatctgcagcgtgccggagatggaggagctcctggggtcgtacctctcgctcaactcgccgcagcaccacccggccatcctcgccgccttcgaggacgtatgggaggccgtcttcggcgaggagtga</cdnaseq>

Protein Sequence

<aaseq>MHTPFVDKSPHRRLDGLGAGGWLKQRLAQILVRSTCTTNTTTTT TTTSSTAFVSLDKTNADTHQEPPPPPSPYFCTPCTYQRPKLDAPGRPRRRRRSASLVH ISIDCTGGAGATSGRRSVHSDAPLLPYSSSLPTKDGRKQSRARRKARSSPSTSRRHCP SSSWGRARLPRGAPGQYSSSSSTVTDDELAPFSTDEEGGEEADTRTLFSSLSFSSDST SEFYHTNSSSSLARKGHKNAPARRPPARRASARITSDPADAFRPVVSVAATKKQHNDM KKKEETAIKRQLGTDDDTAAGAGMAVVKRSSNPYADFRSSMVEMVVERRICSVPEMEE LLGSYLSLNSPQHHPAILAAFEDVWEAVFGEE</aaseq>

Gene Sequence

<dnaseqindica>70..1170#gagataaaccaaaaaaaaactccactctcccctcctcaacccatttccaaacacccaaagaataccgcgatgcacacgcctttcgtggacaagagcccccaccgccgcctcgacggcttgggcgccggtggctggctgaagcagaggctggctcagatcctagtgcgatctacttgcaccaccaacaccaccaccacgacaacgaccacctcgtccacggccttcgtcagcctcgacaagaccaatgccgacacgcaccaagaaccgccgccgccgccctcgccgtacttctgcaccccctgcacctaccagaggcccaagcttgatgcccccggccgtccccgccgacgccgacgcagcgcgtcgctggtccacatctccatcgactgcaccggcggggccggggccacctccggccgccgctccgtccactccgacgcgcccctcctgccgtactcgtcgtcgttgccgacgaaggatggcaggaaacagagcagggcgaggagaaaggcgcgctcttcgccgtcgacatccaggcggcattgcccgtcgtcctcctggggccgcgcgcggctcccgaggggggcaccggggcagtacagctcctcgtcgtccacggtgaccgacgacgagctcgcgccgttcagcaccgacgaggagggcggcgaggaggccgacacgaggacgctcttctcgtccctcagcttctcctccgactccacctcggagttctaccacaccaacagcagcagcagcctcgccaggaagggccacaagaacgcgccggcgcgccgcccgccggcgcggcgcgcgtcggcgaggatcaccagcgacccggccgacgccttccggccggtggtatccgtggcggcgacgaagaagcagcacaacgacatgaagaagaaggaggagacggcgatcaagaggcagctgggcacggacgacgacaccgccgccggcgcgggcatggcggtggtgaagcggtcgagcaacccgtacgccgacttccggagctcgatggtggagatggtcgtggagcggcgcatctgcagcgtgccggagatggaggagctcctggggtcgtacctctcgctcaactcgccgcagcaccacccggccatcctcgccgccttcgaggacgtatgggaggccgtcttcggcgaggagtgagtgagcgatcactgatcagtgacagtggccaaccaaccgatcgaccaaagccttgtttgattagccaaccaagctataactcgttcgttgtgaggccagtagagcagaggtgtacgtagttaggagatgcagcgagcgatcggcattaatgcgtgttatcttggtttgcagttaagtctactttgtatttacatgaagaattggcatatcgatcgtgccatcaaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0625900, RefSeq:Os01g0625900