Os01g0772600

From RiceWiki
Revision as of 18:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0772600

Description

Similar to Casein kinase-like protein

Version

NM_001050928.1 GI:115440226 GeneID:4324710

Length

7007 bp

Definition

Oryza sativa Japonica Group Os01g0772600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34371540..34378546

Sequence Coding Region

34372380..34372766,34373850..34373975,34374065..34374138,34374532..34374601,34374676..34374731
,34374824..34374895,34374972..34375066,34375248..34375314,34375397..34375526
,34375723..34375938,34376049..34376179,34376632..34376806,34376880..34376970
,34377241..34377398,34377647..34377835,34377976..34378035

Expression

GEO Profiles:Os01g0772600

Genome Context

<gbrowseImage1> name=NC_008394:34371540..34378546 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34371540..34378546 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagagttgcgtagtggagtccggcaagctcggttgaaggcaaagaaggttgaggaccttgcagcacaggacccagctgagaacttggtagtggtggcaccgacggtggcaggaagacgtggtagaggaaggggtgggaggggtggaggtagagcaacaggaagaggaagggcaggaggaagagggcgaggtgttccggtgattgatttggacccggaccaaccttgtgaggttcttccaggagctgctattggcggagtcgctgctggaggcccccatcatatcgaggaacttgctaataaggttgtgaagatggatggtgggagtgctgagaagattggtggaggcgaagatgatgggaatgcatctccagttccggataaggttcaagtaggccattctccgcaatacaaggtagagcggaagttggggaaaggtggttttggacaggtttatgttggcagaagggtttctggtggaactgatcgcactggagctgatgctatcgaggtagctttgaaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggcaagtttatagtgctctgaatggatgttatggtataccctgggttcactacaaaggccggcagggggactattatgttctggtaatggacatactaggacctagtctttgggatgtttggaattctgttgggcagacgatgaccccaagtatggttgcttgcatcgctgtagaggcaatttctatccttgagaaacttcatgcaaaggggttcgttcatggagatgttaaaccagaaaattttctacttggccaacctggatcacctgatgagaagaaactttttttgattgatcttggcttagcatctaaatggaaggaaacgccaaatggacagcatgttgattatgatcaaaggccagacatatttaggggtacaataagatatgctagtgtccatgcccatttaggccgtactggtagcagaagggatgatctggaatcattagcatatacattaatatttcttctcagaggaaggttaccttggcaaggctaccagggtgagaacaagagttttcttgtttgcaagaagaaaatggctacctctccagaccttttgtgctgtttctgtccccctccttttaaacttttcctggagagcgtgacaaacatgagatttgatgaagaaccaaactacgcaaagcttatttccctttttgatgaattgattgagccccagcatttgaggcctattagaatcgatggtgctctaaaggctggacaaaaacgtggaaggttgcttgtaaatcttgaagaagatgaacaaccaaagaagaaagttcgacttggaagcccagcaaatcagtggatatcagtctataatgctaggagacccatgaaacaaagataccattacaatgtagcagatgccagacttcatcaacacatagagaagggaaatgatgatggattgttcattagctcagtggcatcttcagccaatctttgggcccttattatggacgcgggaactgggttcacatcccaagtttatgaactctcaccaatatttcttcataaggattggattatggagcaatgggagaataattactacatcagtgccatagcgggtgcaacaaatggaagttccttggtggtcatgtcaaaaggaactccttacactcaacagtcttacaaagttagtgaatcgtttcccttcaaatggatcaacaagaaatggaaagaaggatttcatgttacatcaatgaccactgcaggaagccgctggggtgtagttatgtcaaggaattctggattttctgaacaggtagtagaattggattttttatatcctagtgaaggtatccaccggcgttgggagaatggctatagaataacttctacagcagccactggtgaccaagctgcttttatattgagtatacccaagagaaaattgatggacgagacacaagaaactcttagaacatctgcttttccaagcaaccatgtgaaggagaaatgggccaagaatctttacattgcttcgatatgctatggccggacagtatcttga</cdnaseq>

Protein Sequence

<aaseq>MPELRSGVRQARLKAKKVEDLAAQDPAENLVVVAPTVAGRRGRG RGGRGGGRATGRGRAGGRGRGVPVIDLDPDQPCEVLPGAAIGGVAAGGPHHIEELANK VVKMDGGSAEKIGGGEDDGNASPVPDKVQVGHSPQYKVERKLGKGGFGQVYVGRRVSG GTDRTGADAIEVALKFEHRNSKGCNYGPPYEWQVYSALNGCYGIPWVHYKGRQGDYYV LVMDILGPSLWDVWNSVGQTMTPSMVACIAVEAISILEKLHAKGFVHGDVKPENFLLG QPGSPDEKKLFLIDLGLASKWKETPNGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSR RDDLESLAYTLIFLLRGRLPWQGYQGENKSFLVCKKKMATSPDLLCCFCPPPFKLFLE SVTNMRFDEEPNYAKLISLFDELIEPQHLRPIRIDGALKAGQKRGRLLVNLEEDEQPK KKVRLGSPANQWISVYNARRPMKQRYHYNVADARLHQHIEKGNDDGLFISSVASSANL WALIMDAGTGFTSQVYELSPIFLHKDWIMEQWENNYYISAIAGATNGSSLVVMSKGTP YTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNSGFSEQVVELDFLY PSEGIHRRWENGYRITSTAATGDQAAFILSIPKRKLMDETQETLRTSAFPSNHVKEKW AKNLYIASICYGRTVS</aaseq>

Gene Sequence

<dnaseqindica>841..1227#2311..2436#2526..2599#2993..3062#3137..3192#3285..3356#3433..3527#3709..3775#3858..3987#4184..4399#4510..4640#5093..5267#5341..5431#5702..5859#6108..6296#6437..6496#agacagcgtctctcggttcgggcctcagcgggcggtgtgtgtgtgtgcgcctccgcgagaccagacaccaacctctctctctctctctctcccatccttcccctcctcctcctccgcctcgccgccgccgccacacgccgcacggtctctctccccgaggtaactagccttgcacgcctggacttcttcccctctcctccttcccgtcgtcgtcctccctctatccggagggtctctcgggggacgccgcgttcgtgggctgggctgtctccatgtcggtggcggcggcggcgtggggggacgcgggcgatcgtcggcgcggggcccgatcttagagtccgtcgcgtccgatcgcgcggcgatcgttccggcgcgcgccgatctccccgtttcggcggcggaaattcggggttgctgctcgtgtttcatcggttggtgttggttcgggctacggttttcctgggacgatcgggggggcgccgatgatttggcgagatgtatgcgttcgttaagcccgatttttgatcggttttggttgggaaaatcagtgtcggggagatcgggataggatttggggcggacgggttgtggaaaccactgttggcaaatctgatggcacagtctgccgtgattttttttttggctggagatgtgatatggttaggagttgatgggtctgctattagatgtgaaatcatcagttggtttactcaaccttatcagtgttagtttattctaatccacatgtttttgagcagtataaatgcaggattaatccgtggtgttgtgactttttgggtggtagattcgtgggcggcaggaagtgcatggggagaaaggatgccagagttgcgtagtggagtccggcaagctcggttgaaggcaaagaaggttgaggaccttgcagcacaggacccagctgagaacttggtagtggtggcaccgacggtggcaggaagacgtggtagaggaaggggtgggaggggtggaggtagagcaacaggaagaggaagggcaggaggaagagggcgaggtgttccggtgattgatttggacccggaccaaccttgtgaggttcttccaggagctgctattggcggagtcgctgctggaggcccccatcatatcgaggaacttgctaataaggttgtgaagatggatggtgggagtgctgagaagattggtggaggcgaagatgatgggaatgcatctccagttccggataaggtatattcttcatattgagctcttactaatttattatgcatgttatcacttgcatgcatttctcctgttattctgattgcagacatgcactgttagggtttcggagatgacgacaaattagtagattttggcctggtaccacaagtgtaccgttatatcatattacgatattatgtcgttatgtgcatggttcaggtggaccaagcttttttctttacgtagatattggtaacgccttttggaacttattaaatgcataaaataattgacctgataacaagcataacagcaccttccttactctaccatttttgtttttggcattgtttgtagggcaaggcaggtgcccctatttatgttctattcagaaatgtttccacttttttctatggatgcttccttgtcaatgatgctagcttgaagtttttgatagtacatagccgtagaatgggatggttgacctcaccgaattcatgagggcatctccttatctgttaccgtgcgaatgccagtgcacatggctgctctgcatccctcaacttaggcttactgtttgcttatatcatggaagctgttcttttacaacatagttgatctaagacctaatatagttgtccccaaatctagtttggatgccactgtggagtttgtgcaatagcttggcgtcattaggttcttcaaacttatagacatggatctgtgcatggcaaataactttgaccttttgatacaaaatcaactttaggttccatgaacatcatctagtcttcgagtgctctaaatctggagtcttaggaggtcactttcttgcctagcaataaaccactccataaattgcatcggttataactaatcctttttcattgcaaatattcatctctatctcaaatggcaggcatttctgagagtcacgctctgcttgaaaggagtgcaaaaaaaatgttagtgcatgataggatacttgaatctgtcatgacttttactagaatacggtttgtttgagtgtcatctggcacaatattgttttacactatgatgagttggagatttggttacctagtaaagtcgatgaatcatttgcaggttcaagtaggccattctccgcaatacaaggtagagcggaagttggggaaaggtggttttggacaggtttatgttggcagaagggtttctggtggaactgatcgcactggagctgatgctatcgaggtctaaccccatcctttttccttttcttttaaaaagtttctgctataatatcacatggtggtgataatagatggattctcatattgcaggtagctttgaaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggcaagtttataggtaattgcactataataagttgagtattacaatcttagagataggatctcagagactcggacataataaaagttattgtgcaatatcttgattcttgcctgaaaatgttgtttctattttgcatattacaaggactatttatctcttggatccaagaatttgttattagttgcatgaagttttgcacattaacctgaactagcaaacatttaatgcttagtatgttacagcaatgttttctgctgattataattgtagactagcttatttcctctatctttgaacatttagttatttggagttatctgttgaagggtaccgtagtactgtagtgccactacttactacttcgagaaccaaccttactatttgtgcgttttgcatgtgtttcagtgctctgaatggatgttatggtataccctgggttcactacaaaggccggcagggggactattatgttctggtcagtcgtataagcattttctaattgtttgagattcttttcttaacaactgctaaaatttgtaaccttttcaggtaatggacatactaggacctagtctttgggatgtttggaattctgttgggcagacgtaagattgttgtggcctgattgcttttttgtcccctcagtaatatttgttgttaaagacagcaactaagtgataaccaatgtttcatgcaggatgaccccaagtatggttgcttgcatcgctgtagaggcaatttctatccttgagaaacttcatgcaaaggggtaagcaggccttttgaattttctattagcctctggatttcactgttcatgttttatttttggaacattttaccaggttcgttcatggagatgttaaaccagaaaattttctacttggccaacctggatcacctgatgagaagaaactttttttgattgatcttggcttaggtatgcaatggaaaccttatgtgattgatactggttgcaaaaattgagcacataacccatctcaataagatttaacattccctaatcagaattgcggatgttcttttgtaatgctgtttgtacctaatatcattgtaaaatgtgagttcacaagtgctcatgctaccatttacaatttcagcatctaaatggaaggaaacgccaaatggacagcatgttgattatgatcaaaggccagacatatttaggttaatttttatctgatgactttttttggttatattttttgcaactttcctccatatttatcatctgccttcttttggacaggggtacaataagatatgctagtgtccatgcccatttaggccgtactggtagcagaagggatgatctggaatcattagcatatacattaatatttcttctcagaggaaggttaccttggcaaggctaccaggtttccattctttctctggacatttggttatacctgatgtactatgtgttatgttcatttgcatattgagtgaaggtttttggttcttccttttgtttgtttccaatagattcagtgataacgatagtttatctgtgatatgttctttcttgctcactgattttgtatataacttgatctgtcatgtttattgcagggtgagaacaagagttttcttgtttgcaagaagaaaatggctacctctccagaccttttgtgctgtttctgtccccctccttttaaacttttcctggagagcgtgacaaacatgagatttgatgaagaaccaaactacgcaaagcttatttccctttttgatgaattgattgagccccagcatttgaggcctattagaatcgatggtgctctaaaggttattttacatcagaaattttttttcttcatattacagtatcagctagtcaatccacccaattttaatataattcacatgatttgacattgaatggtttctatatgcaggctggacaaaaacgtggaaggttgcttgtaaatcttgaagaagatgaacaaccaaagaagaaagttcgacttggaagcccagcaaatcagtggatatcagtctataatgctaggagacccatgaaacaaaggtaacaaactttgacctttgcatgcttgttgtaatcttcattttcacagtgagctcaactatatgaccgtattttgtgatgtatgacgtgaagtttgatccacaaatagtctgaagtcacgtgcgattcatagttgtactcaactccttggtgcggtgcttatgccgtgataattttttgtcgtccatgtcaaggtttagtatatgccagtcagccagtctacaacttgacctcatttaatttattcaaagcaatgctttatgtatctaatttgccaacagaccattactgctttggtattttgaactgggaactgcagctaagcatgctatattgttattaacagtttcttagtcaaaaatcaaaagaatatacaacttgggtcactgtgtggcttgagcttcaaaataccttttcaataacgtccttgtttcccttttttttatcaacagataccattacaatgtagcagatgccagacttcatcaacacatagagaagggaaatgatgatggattgttcattagctcagtggcatcttcagccaatctttgggcccttattatggacgcgggaactgggttcacatcccaagtttatgaactctcaccaatatttcttcataaggtactcttactcttgagcaaagattccctcttttctctggagcgttctgagttgcctattcttgtacttttaggattggattatggagcaatgggagaataattactacatcagtgccatagcgggtgcaacaaatggaagttccttggtggtcatgtcaaaaggtttgtctcagctgttcttttgttggaggtctctcatgttactaccattgttattcttcataaaggaccatctatgtttagaaacttggcctgtttctctttccattcacttcgcaggtgtctcaatttttttttgggaagatggttgatatgtcctgatgtagtgatgtgtatatattgacttgcatgttccacacacttagtgtttcttttgtttatgtattatgacatgaatggggttagtctgacatggtgatttactctttccaggaactccttacactcaacagtcttacaaagttagtgaatcgtttcccttcaaatggatcaacaagaaatggaaagaaggatttcatgttacatcaatgaccactgcaggaagccgctggggtgtagttatgtcaaggaattctggattttctgaacaggtatttgtggttattggtgtaatatttttttttcctggtgtgcaaatcagttgcaatctaagcgatggtatttcaattttttttttggcatgtgaaaaagggtacaaaactctttagttgtcagaaaataacttgttttcagatgaaatgagttgtcgtattgatggaaaccagtctttttgaacctgacagggattcttacatcatatatcaagttgattatacttcatctctctcatgtactgcaggtagtagaattggattttttatatcctagtgaaggtatccaccggcgttgggagaatggctatagaataacttctacagcagccactggtgaccaagctgcttttatattgagtatacccaagagaaaattgatggacgagacacaagaaactcttagaacatctgcttttccaagcaaccatgtgaaggtacgaatacatgactaattcctgtgtacattgtttttcttcacagttctctctaaccagaccattcaacttacatttcttgttcaagcgtcaactcgatcactactctaaccttgtcccatactgttgtctttttgtaggagaaatgggccaagaatctttacattgcttcgatatgctatggccggacagtatcttgaggcataccctgcacaccaactcgggcttagcatattcgcaactgagttgatgtcgggaaaaccagcaatctagttgctgctctctgttactctgtatgtgtaggtaacattggctaggtaaaccttacatcatggccagagttaggggcgcgagaggaagcagggaggaaggtggatggacagctaataagctgatgaggatgtcatccggctggtggtctggtggaggtggcagaagcggatgccgtcaacatattttgcatcaagatgtgctttgctgcagtccttgctgcggtgcacagcacggatgacccttatagcctctttggaggcctataatctgagagcccgttgtgtatagctcttatcgtgtcctgcgttttgtctggtggaagcgaaattaccatgtttccagaactccggaattgtctctaaattattgtgtgagaatgggtgtactgataaatcggtgtatcgattccattattcgatggtctcattgcattaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0772600, RefSeq:Os01g0772600