Os01g0775200

From RiceWiki
Revision as of 18:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0775200

Description

Protein of unknown function DUF593 family protein

Version

NM_001050942.1 GI:115440254 GeneID:4327160

Length

4590 bp

Definition

Oryza sativa Japonica Group Os01g0775200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34524464..34529053

Sequence Coding Region

34525783..34526737,34526823..34526990,34527077..34527163,34527253..34527417,34527492..34528807

Expression

GEO Profiles:Os01g0775200

Genome Context

<gbrowseImage1> name=NC_008394:34524464..34529053 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34524464..34529053 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtacaaggatgccaaccttacggagattgtcagccacactgtcatcggtgttgctcgagtggatcttgatgctgctgctgttcatcgatgcggtttattgcttcttggtcaccagatttgcccgcctctgcagattaccggcaccgtgccctttctgctcaaggctagaccatgtcctgggtaatgagaaaccatgcttctacagggaattgatctgcaaaactcacaagtcagagatctcatctttggccttctgccgtctacatcagaaacttgcaggtgcccaaagtatgtgtgagagatgcagtgactcacttgtagaaaacaatgatgaccgcaccgatgagccaacaatggctgccactctacctgatagtaatcaaggattatattcccatgatacaagaatttgctcatgttgtgcacagcattatacacaacagagaccgacaatgttttctcgaatgatcacagaactagaacctgctgaggctgtttgctcaccaaagatttgcacagattattccatacttcatcaagtggataaatctttggataaagatatttgtcaccagagtgatcactccatccatgaacgatacagtgtgctgcagatgacatctggctccgaggatgaggctccctgtgctgatgatggcaaaatttcacaccatcataaaaccaattgtatggaggaagatttgaatgaagatgccactgccgagaaatttgctgcttcttccactgagttggtcaggccattagaaatgaatgttccgatggaaaccgatgttggtgactcatatgatatatccttgccatatgttcttgtagatgatcatcctgatagtataattggtgagggccaaatggaagcagaagatgcttcattagaaaaacagacatgccagcatgatcccctagctgtcaaagaagagtcaggtttgacagatgtcaatgtttcccaagttccagttgcatcaagtgtcgagtcacctcagaatcttgggtacaacgaggcatgtcatggagcgagtgaaagcaccattgatccatgttcatcacagtccacaacactagaacaaaacattgctgtttcagagcacaacagcacaatagatgatctggaaggtcacaggtcagaaattactgttacatcaagtagagagtttcaccagaaaagtgcattggttgatgatgatccagttaattttagagatgaccatgtttcacaagttaattctagttctgaagctgttgatgaagctgaagattatgctaaggaggctgaacagacttgtgatatggtaacacatgaagcggcactcaaagatccttccaatacaaattccaaagatcctacagcaaaaggttttgtggaagaagctcctatatcaccacaggctattagaccaaacagtgaggtatttcagggtctcaatgtcatcgaggaacatccgcaaacaagcgcgactattggtgaaaggagaccatctctaagcactcagattagcatgaatgaagcctacaagcttgccattggtgccaagagtagcttgccatcccccaccttgactgatgtgattcttggaaaggattcctcttctagtgtaaatgaagaattgaggttactgctgtcacagctctcggcttccagaggactcgaggctccatgggtcgacccaggccctagcccacgtgcgtatgggcgtggtgatgatttgatagtgcagaacatcacgaacagaatttcaattgagagaaatgcatctggtttggagtcactggagggtagcactgtaagtgagatggaaggtgaaagtgccactgaacggttgagacgacagattgatcttgaccgaaaatctatacacctcctctgcaaggaactggaagaagaaaggaacgcttcagcgattgctgcaagtcaagctttggctatgattaccagattgcaggatgacaaggctgccatgcagatggaagctttacattaccagcggatgatggaagaacaagcagagtatgatagtgatgcgcttgctaaagctaacgagctacttgctcagagggaacaacaaatagaggaattggaagctgagctcgaaaactacaggatgcagtttgcaggtggaccaacagagaaacaatccaatcaggtctcctttaatgaagaaaacattgccgaaactttgcttgatgaaactggtcttgaagctcctgcaattaccacaccaagtggtataaattcattagtgagctttgaagaggagagggcatatatagttgattgcttgacgaagctggagcagaagcttcaatcctactccaacaacagtactaacattcacttgtcaaattcagatgtcatagaggattacctttccaacaaaatgcacgttgtagatgatggctcactgcaatgccaagaaagctcaagagaggcccaggagcccgttttcttagctaaagaagctcattcttcaacagtgagtcggaagactgatcttagcacgcttcaagaagaaatctcaaacttgaacaaaagattgaagacgctagaaggagaccgcaactttattgaacatagcataaactcactcaggaatggcaaagaaggtgtgatgtttattcaggaaatcgctagcaacctaagagaactgcgagcaattgctggtagtaaataa</cdnaseq>

Protein Sequence

<aaseq>MGTRMPTLRRLSATLSSVLLEWILMLLLFIDAVYCFLVTRFARL CRLPAPCPFCSRLDHVLGNEKPCFYRELICKTHKSEISSLAFCRLHQKLAGAQSMCER CSDSLVENNDDRTDEPTMAATLPDSNQGLYSHDTRICSCCAQHYTQQRPTMFSRMITE LEPAEAVCSPKICTDYSILHQVDKSLDKDICHQSDHSIHERYSVLQMTSGSEDEAPCA DDGKISHHHKTNCMEEDLNEDATAEKFAASSTELVRPLEMNVPMETDVGDSYDISLPY VLVDDHPDSIIGEGQMEAEDASLEKQTCQHDPLAVKEESGLTDVNVSQVPVASSVESP QNLGYNEACHGASESTIDPCSSQSTTLEQNIAVSEHNSTIDDLEGHRSEITVTSSREF HQKSALVDDDPVNFRDDHVSQVNSSSEAVDEAEDYAKEAEQTCDMVTHEAALKDPSNT NSKDPTAKGFVEEAPISPQAIRPNSEVFQGLNVIEEHPQTSATIGERRPSLSTQISMN EAYKLAIGAKSSLPSPTLTDVILGKDSSSSVNEELRLLLSQLSASRGLEAPWVDPGPS PRAYGRGDDLIVQNITNRISIERNASGLESLEGSTVSEMEGESATERLRRQIDLDRKS IHLLCKELEEERNASAIAASQALAMITRLQDDKAAMQMEALHYQRMMEEQAEYDSDAL AKANELLAQREQQIEELEAELENYRMQFAGGPTEKQSNQVSFNEENIAETLLDETGLE APAITTPSGINSLVSFEEERAYIVDCLTKLEQKLQSYSNNSTNIHLSNSDVIEDYLSN KMHVVDDGSLQCQESSREAQEPVFLAKEAHSSTVSRKTDLSTLQEEISNLNKRLKTLE GDRNFIEHSINSLRNGKEGVMFIQEIASNLRELRAIAGSK</aaseq>

Gene Sequence

<dnaseqindica>1320..2274#2360..2527#2614..2700#2790..2954#3029..4344#atactacctttcggctggctgaccggggtggcgtcgctgtcccgggccggcccgcgtagccgactttcggttgagccgcccgccggccccgccccggcgaggcgtcgcacccccgccgccgccgccgcccccactccacttgcttcctctctttgtctcccttcccttcgtttttggctcgttccggcgggtgggaataatatagctcaggcgtggcgagtttggtcggcgcatgccaaccttttccgtctcctctctctctctttttgccctctgctcctgcctgcctggctgccgcgatcgcagatcgggatctcggctcagcgcgctgcggcgaccccgctgcagcttgcaggtatgtatgttcttgctggatgatcctcggaacattcttcttcttcccttgctttctttagctttcgtttctaggtttgcttctgtagttggtgagctcgggttctaggttgcttctgtagtttggagagctcgggagcacacccggtggatggtgtgattttgctgagttttctgttcttacatgggagaggctagtcaattataggggaatccgctgtgcaggctatagtagtgctaggttgcttagctttatgcttattgttctctttgtttgatcggattttgttctgttgctgggtggtttctggaagagtttagtctgttttggtgttaaaattttttcaagctttcaaagaggttcttttctttctccccttacaaaagagacagtttgagctgttctttcatcatcggagtttgtgggattcaaaagaaagctcttctgtgcagcatcactgttcttaatgcttcttgaaattgtcctgtaacaattactacttggactgatgcttccaacattctcttggtcctgggtctattgatcaccattatggctgctgctagagctggacgcttttgattttctgttttctagtggttttccaacctggtgttcggttttcctgtcttttctccagctaagctcgcctttagttcaccaaaatcaagcatatccgctacaatgacaccgccatcattactttaccgttctatcagtgctcaataatgagataaaaggccgtcctaatcccaccaaactttgatgtttacagcttttgatgagtagttgctatgttattcagaacagcatatcattactcattagtaggatcaattatacacttcactcattaagtttgtttttgattccttcagaaattctggttcaacaccagccacctttcaccaatctaaagaacttgagtacagcaattgtgaagaattgagcatactgttcaaagatgggtacaaggatgccaaccttacggagattgtcagccacactgtcatcggtgttgctcgagtggatcttgatgctgctgctgttcatcgatgcggtttattgcttcttggtcaccagatttgcccgcctctgcagattaccggcaccgtgccctttctgctcaaggctagaccatgtcctgggtaatgagaaaccatgcttctacagggaattgatctgcaaaactcacaagtcagagatctcatctttggccttctgccgtctacatcagaaacttgcaggtgcccaaagtatgtgtgagagatgcagtgactcacttgtagaaaacaatgatgaccgcaccgatgagccaacaatggctgccactctacctgatagtaatcaaggattatattcccatgatacaagaatttgctcatgttgtgcacagcattatacacaacagagaccgacaatgttttctcgaatgatcacagaactagaacctgctgaggctgtttgctcaccaaagatttgcacagattattccatacttcatcaagtggataaatctttggataaagatatttgtcaccagagtgatcactccatccatgaacgatacagtgtgctgcagatgacatctggctccgaggatgaggctccctgtgctgatgatggcaaaatttcacaccatcataaaaccaattgtatggaggaagatttgaatgaagatgccactgccgagaaatttgctgcttcttccactgagttggtcaggccattagaaatgaatgttccgatggaaaccgatgttggtgactcatatgatatatccttgccatatgttcttgtagatgatcatcctgatagtataattggtgagggccaaatggaagcagaagatgcttcattagaaaaacagacatgccagcatgatcccctagctgtcaaagaagagtcaggtttgacaggtaactgttagttccccaaactgggatgactcctactgaacttctttttcagtttgaaagattaatagcatagataatcatgcagatgtcaatgtttcccaagttccagttgcatcaagtgtcgagtcacctcagaatcttgggtacaacgaggcatgtcatggagcgagtgaaagcaccattgatccatgttcatcacagtccacaacactagaacaaaacattgctgtttcagagcacaacagcacaataggtatatcttaatcatagtttaacaataaactgaatggtattttcttcctgttcgtctaaccccccatcacaataaaaaaatgtcagatgatctggaaggtcacaggtcagaaattactgttacatcaagtagagagtttcaccagaaaagtgcattggttgatgatgatccaggtaaggctgtacctcaggactgactatttctcaagaatcaagatatatgtctgaaaggtttctttattccgacctgttttccctttcagttaattttagagatgaccatgtttcacaagttaattctagttctgaagctgttgatgaagctgaagattatgctaaggaggctgaacagacttgtgatatggtaacacatgaagcggcactcaaagatccttccaatacaaattccaaagatcctacagcaaaaggttagttgatttctaccttccctcaagcaacagtatttcaaaaactggtccttacatttaacccttttggttaggttttgtggaagaagctcctatatcaccacaggctattagaccaaacagtgaggtatttcagggtctcaatgtcatcgaggaacatccgcaaacaagcgcgactattggtgaaaggagaccatctctaagcactcagattagcatgaatgaagcctacaagcttgccattggtgccaagagtagcttgccatcccccaccttgactgatgtgattcttggaaaggattcctcttctagtgtaaatgaagaattgaggttactgctgtcacagctctcggcttccagaggactcgaggctccatgggtcgacccaggccctagcccacgtgcgtatgggcgtggtgatgatttgatagtgcagaacatcacgaacagaatttcaattgagagaaatgcatctggtttggagtcactggagggtagcactgtaagtgagatggaaggtgaaagtgccactgaacggttgagacgacagattgatcttgaccgaaaatctatacacctcctctgcaaggaactggaagaagaaaggaacgcttcagcgattgctgcaagtcaagctttggctatgattaccagattgcaggatgacaaggctgccatgcagatggaagctttacattaccagcggatgatggaagaacaagcagagtatgatagtgatgcgcttgctaaagctaacgagctacttgctcagagggaacaacaaatagaggaattggaagctgagctcgaaaactacaggatgcagtttgcaggtggaccaacagagaaacaatccaatcaggtctcctttaatgaagaaaacattgccgaaactttgcttgatgaaactggtcttgaagctcctgcaattaccacaccaagtggtataaattcattagtgagctttgaagaggagagggcatatatagttgattgcttgacgaagctggagcagaagcttcaatcctactccaacaacagtactaacattcacttgtcaaattcagatgtcatagaggattacctttccaacaaaatgcacgttgtagatgatggctcactgcaatgccaagaaagctcaagagaggcccaggagcccgttttcttagctaaagaagctcattcttcaacagtgagtcggaagactgatcttagcacgcttcaagaagaaatctcaaacttgaacaaaagattgaagacgctagaaggagaccgcaactttattgaacatagcataaactcactcaggaatggcaaagaaggtgtgatgtttattcaggaaatcgctagcaacctaagagaactgcgagcaattgctggtagtaaataacacgcacaacttctttttagttttttacacaacttatttgtatagcagatacccatccatcttgtaaattgtatacttggcaatctgttctagtttgagggaaattgcatagaaaaagcttgtattaaacacaaggcagacataattgtaagctgtgcatgtttttcatttttttgagctttgggtttgctcataatttttttaattgtattactccaagacagatttgttcatcttaatagcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0775200, RefSeq:Os01g0775200