Os01g0885700
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0885700 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001051561.1 GI:115441492 GeneID:4324885 |
| Length |
2771 bp |
| Definition |
Oryza sativa Japonica Group Os01g0885700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:40237082..40239852 |
| Sequence Coding Region |
40237277..40239757 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:40237082..40239852 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:40237082..40239852 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccagccatggcggacaatcctccattgatcatgctcctcgcgttcttgttctctgctcttcttcttctttctccggctcatggcggcagccgccttcaaagaggtgaatcgctctccgtggaacgcgcctccgacatcctcgtgtcctccaatggcgtcttcgcgttcggcttctacaacctctcctccaccgtcttcaccgtctccatctggttcgccgcctccgccggccggaccgtcgcctggacggccaaccgcgaccggccggtgcacggcgcggggtcgaagctcacgctgcggcgagacggccgcctcgtgctcgccgactacgacggcacgccggtgtggcagaccaactcgagctccggcgccgccgccgccgcggagctgacggactccggcaacctcgtcgtgacaagccatggcggggacgtgttgtggcagagcttcgactacccgaccgacacgctgctgccggggcagccggtgacggcgacggcgaggctgtccacgacggacgtgctccacccgacgagccactacgcgctccggttcgacgaccgctacctcctctcgctggcgtacgacggcccggacatctccaacatctactggccggaccccgacgccagcagctgggccaacggcaggatctcctacaacgccagccgccggggcgtgctcgacgacgccggcaggttcctcgccagcgacaacaccacgttcgtcgcgtccgacacgggcgccgccgccggcggcgtcacgtggcggcggctgacgctggaccacgacggcaacctccggctgtacagcctgcgcgacgccgacggggggtggtcggtttcttggatggccttctcccagccgtgcggcatccatggcctctgcggctggaacggcctctgcgtgtacacgccgcggccggcatgctcgtgccctccaggctacgttcccgccgacgccggcgaccgcggcaagggctgccggccgacgttcaacctcacctgcggcggcggcggtggccggccggagatgggcttcgcgcggctgccgcaaacagacttctggggctccgacctcaacctcttctcctccatctccgtcgacggatgcaaggcggcgtgcctcgagctctgcaactgcgtggcgttcgagtacaaggatgacgtcagcgactgctacctcaagtcggcgctcttcaacggcaagacctaccccggctaccccggcacggtgtacctcaagcttccggcgaacttggtggcggagtcagacacctacaccgccgccccggccgccgccgccgccgttaatctcgcctgcgacgccgcgcgaacagaggaggttctcctctccttctcggccgcctccccggacacgtcgtcgtggcgctactactacgggttcctctcggcgttcttcgccgtggagctctgcttcatcgccttcgggtggtggttcacggcgaggagccggccggcgacgtcggagcaatgggcggcggaggaagggtacagggtggtcaccgaccatttccggcggttcacctacggcgagctcaggaaggcaaccaagaacttcaaggacgtgatcggtcatggccggtacggctccgtgtacaggggcgtcctcgccggcgccggcgacgaccgcgccgtggccgtcaagaagctcaaggccgcgacgccgcagcgtggggacgacgagttcgagaccgaggtgagcgtcatcggccggatcaaccacatgaacctggtgagaatccgcggcgtctgctcggagcgccaccgccggcggcggctgcttgtgtacgagtacgtggacaacgggtcgctcgccacgtggctgtttggcgccaaggagactctcaattggaaccaaaggtacaacattgccgttggtgtggccaaaggtttggcctatctccaccatgagtgcctcgactggatcatccactgcgacgttaagccagagaacatacttctcgacgaggatttcgagcccaagatcagcgatttcgggctcgcgaagatgcaacagaggagggatctcgatgatcccgcctcgtttagcatcagagggaccagagggtacatggctccggaatgggtttcgagtcttccgataaccgaaaaggttgacgtgtacagctacggtgtcgtgcttctggagctggttagaggggccagaatggcggatttggccacggatagcgttggtgatgcggagattgcgatgagacagttggtgtggaagatcagggaagggttgaagattggtgatcggacatgggtaatcagcttggtggatcgtaggttgaatggtagcttcgtttactcacaggtggcgttgatgctggaggtggctacgtcgtgtttggagaaagaaaggaaccaaagaccaagtatgaatgatgtagttaagaagttttacacatcagacaaaaaggttgaattcattggggaaatgtcaagctag</cdnaseq> |
| Protein Sequence |
<aaseq>MPAMADNPPLIMLLAFLFSALLLLSPAHGGSRLQRGESLSVERA SDILVSSNGVFAFGFYNLSSTVFTVSIWFAASAGRTVAWTANRDRPVHGAGSKLTLRR DGRLVLADYDGTPVWQTNSSSGAAAAAELTDSGNLVVTSHGGDVLWQSFDYPTDTLLP GQPVTATARLSTTDVLHPTSHYALRFDDRYLLSLAYDGPDISNIYWPDPDASSWANGR ISYNASRRGVLDDAGRFLASDNTTFVASDTGAAAGGVTWRRLTLDHDGNLRLYSLRDA DGGWSVSWMAFSQPCGIHGLCGWNGLCVYTPRPACSCPPGYVPADAGDRGKGCRPTFN LTCGGGGGRPEMGFARLPQTDFWGSDLNLFSSISVDGCKAACLELCNCVAFEYKDDVS DCYLKSALFNGKTYPGYPGTVYLKLPANLVAESDTYTAAPAAAAAVNLACDAARTEEV LLSFSAASPDTSSWRYYYGFLSAFFAVELCFIAFGWWFTARSRPATSEQWAAEEGYRV VTDHFRRFTYGELRKATKNFKDVIGHGRYGSVYRGVLAGAGDDRAVAVKKLKAATPQR GDDEFETEVSVIGRINHMNLVRIRGVCSERHRRRRLLVYEYVDNGSLATWLFGAKETL NWNQRYNIAVGVAKGLAYLHHECLDWIIHCDVKPENILLDEDFEPKISDFGLAKMQQR RDLDDPASFSIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVRGARMADLATDSV GDAEIAMRQLVWKIREGLKIGDRTWVISLVDRRLNGSFVYSQVALMLEVATSCLEKER NQRPSMNDVVKKFYTSDKKVEFIGEMSS</aaseq> |
| Gene Sequence |
<dnaseqindica>196..2676#atccattgttcaattgccgccgagttgacacaattaacaccaagcaatggtcattagcgctgacacaatgacatactcctaattagtactgcaattttgggtccttgggttgttagaattcataactaactgagatgcgagatttcaccttagtttacagcagctgcagctattagcttcggtggtgcaggattgatgccagccatggcggacaatcctccattgatcatgctcctcgcgttcttgttctctgctcttcttcttctttctccggctcatggcggcagccgccttcaaagaggtgaatcgctctccgtggaacgcgcctccgacatcctcgtgtcctccaatggcgtcttcgcgttcggcttctacaacctctcctccaccgtcttcaccgtctccatctggttcgccgcctccgccggccggaccgtcgcctggacggccaaccgcgaccggccggtgcacggcgcggggtcgaagctcacgctgcggcgagacggccgcctcgtgctcgccgactacgacggcacgccggtgtggcagaccaactcgagctccggcgccgccgccgccgcggagctgacggactccggcaacctcgtcgtgacaagccatggcggggacgtgttgtggcagagcttcgactacccgaccgacacgctgctgccggggcagccggtgacggcgacggcgaggctgtccacgacggacgtgctccacccgacgagccactacgcgctccggttcgacgaccgctacctcctctcgctggcgtacgacggcccggacatctccaacatctactggccggaccccgacgccagcagctgggccaacggcaggatctcctacaacgccagccgccggggcgtgctcgacgacgccggcaggttcctcgccagcgacaacaccacgttcgtcgcgtccgacacgggcgccgccgccggcggcgtcacgtggcggcggctgacgctggaccacgacggcaacctccggctgtacagcctgcgcgacgccgacggggggtggtcggtttcttggatggccttctcccagccgtgcggcatccatggcctctgcggctggaacggcctctgcgtgtacacgccgcggccggcatgctcgtgccctccaggctacgttcccgccgacgccggcgaccgcggcaagggctgccggccgacgttcaacctcacctgcggcggcggcggtggccggccggagatgggcttcgcgcggctgccgcaaacagacttctggggctccgacctcaacctcttctcctccatctccgtcgacggatgcaaggcggcgtgcctcgagctctgcaactgcgtggcgttcgagtacaaggatgacgtcagcgactgctacctcaagtcggcgctcttcaacggcaagacctaccccggctaccccggcacggtgtacctcaagcttccggcgaacttggtggcggagtcagacacctacaccgccgccccggccgccgccgccgccgttaatctcgcctgcgacgccgcgcgaacagaggaggttctcctctccttctcggccgcctccccggacacgtcgtcgtggcgctactactacgggttcctctcggcgttcttcgccgtggagctctgcttcatcgccttcgggtggtggttcacggcgaggagccggccggcgacgtcggagcaatgggcggcggaggaagggtacagggtggtcaccgaccatttccggcggttcacctacggcgagctcaggaaggcaaccaagaacttcaaggacgtgatcggtcatggccggtacggctccgtgtacaggggcgtcctcgccggcgccggcgacgaccgcgccgtggccgtcaagaagctcaaggccgcgacgccgcagcgtggggacgacgagttcgagaccgaggtgagcgtcatcggccggatcaaccacatgaacctggtgagaatccgcggcgtctgctcggagcgccaccgccggcggcggctgcttgtgtacgagtacgtggacaacgggtcgctcgccacgtggctgtttggcgccaaggagactctcaattggaaccaaaggtacaacattgccgttggtgtggccaaaggtttggcctatctccaccatgagtgcctcgactggatcatccactgcgacgttaagccagagaacatacttctcgacgaggatttcgagcccaagatcagcgatttcgggctcgcgaagatgcaacagaggagggatctcgatgatcccgcctcgtttagcatcagagggaccagagggtacatggctccggaatgggtttcgagtcttccgataaccgaaaaggttgacgtgtacagctacggtgtcgtgcttctggagctggttagaggggccagaatggcggatttggccacggatagcgttggtgatgcggagattgcgatgagacagttggtgtggaagatcagggaagggttgaagattggtgatcggacatgggtaatcagcttggtggatcgtaggttgaatggtagcttcgtttactcacaggtggcgttgatgctggaggtggctacgtcgtgtttggagaaagaaaggaaccaaagaccaagtatgaatgatgtagttaagaagttttacacatcagacaaaaaggttgaattcattggggaaatgtcaagctagcaagcaatctgatggcaatgttgtagttgtaaacctcctgtacaaacttcaactatagtgaaaaggagttcttttttgatactctttgtgctagt</dnaseqindica> |
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