Os01g0897800

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Annotated Information

Function

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Expression

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Evolution

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References

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Structured Information

Gene Name

Os01g0897800

Description

Rad21/Rec8 like protein, N-terminal domain containing protein

Version

NM_001051626.1 GI:115441622 GeneID:4325108

Length

9697 bp

Definition

Oryza sativa Japonica Group Os01g0897800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40781200..40790896

Sequence Coding Region

40781517..40781615,40781898..40782027,40782117..40782225,40782771..40782804,40782964..40783739
,40783916..40784052,40784320..40784464,40784546..40784929,40785023..40785798
,40786197..40786246,40786801..40786850,40786949..40787043,40787127..40787385
,40790344..40790467

Expression

GEO Profiles:Os01g0897800

Genome Context

<gbrowseImage1> name=NC_008394:40781200..40790896 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40781200..40790896 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttctactcgcagttcatcttggccaagaaggggcccctcgggaccatatggatcgcggcgcatttggagcggaagctgcggaagaatcaggtcgcggatacggatatcggcgtctccgtagattcaattatattccctgaagttccgattgcacttcgattatcaagccatcttatgcttggtgtggtcaggatctattctcgcaaggtgaactacctattccatgattgcagtgaagcgttgctgaagataaaacaagcctttaggtctactgccgttgatcttccccctgaagaatcaactgctccttatcattctataacacttccagagacattccatctggatgattttgaattaccggaggctgcatttcagggtgacattgatcatcatgtaagcacaaaagaacagatcaccttgcaagacaacccagagaaaactggatactcaacatcccaatttggcttagatgaaagatttggtgatggcaattcttcacatattgggttggatttggaagaggaattaatgctgaacaaggaccagtcaattcaacttgaggctgatgatggcattattattcaaggtcgatcagcagttcatcctaccgatatggaagttgatgataaccaaaataaagatgaaagcgctgaaggatacaacatggaggatggaccttccagtcacaacaaactaaatccgttaagtgcagatggtctagtaggaaacagtcttcctaattggcatacatacaatgtgcaaacacctgatctgaatgatatgctattgaacaatgatgggaatgcaggaccatcagcttcatactatcaacctagtcccttcccttgtgatgagcctgcatcaccagagtttgtaagtgcccaggccccggctacacctggcctaatggaagagactgttccttccagagtgcatgaaagtcctgttctgagtccacagcgaaaagcttcaccatcaagcaatgatgaaactgcaaagacagctgaaaatgctaatgatcttgtgggtgctgagacgactgaacttgcattgacaaagcctgtgcaaattgaatcttctggtgctgtacaggagattgattccttgagtcaacaatgtgcaactgaggaattgccaccccaagctgaaacctcaaacttggaagctaccatggacaagtcaatgataaatactgatggtgtagctgcatcaggtgaagctacagctgctaaagaaaccactgaagtgtcattggttgaaaattctttagagctatgcgctgatggtcctactgaacctgtgattgagaaccaaacacagtttaatgatggatcagttgatgtgcaagggggcggtcagcatgcacctcatgctatcttagcaactgcagattcccaagtgaatgtagaagcatcaacacaagaaatggcatctaacgatataccaagtgacctaccaaccttggaatttccagaacgtgagaaaatgctgtcagctccagacgttgaattgtaccaggcaaatgacttgggccaggtaactgcagaaaagggaaccactgaatctgatggaagtaacaaagtaggtagtctcactagcagaaaaagacacttggaggacagtttgccagctctcgaaagtgcaactactgaaaaattgtctagcagaccacgtggtaaaagaaccattgatggtattcctgatgatgatgatttactggcgtctatattagttggtagaaggacccctggactgaggcttgattcaacaccaataccacctaagacgtcatctttgaaacgtccaaggttgacgtcaaagagtaccacaccgaagagaaaagtgcaaatggatgatgccatggttatacatgctgataccatacggcagcagttgatcagcactgaggatataaggcgcattcgtaaaaaggctccatgtacccgttccgaaatatggatgatcgagaaaggttccttagaagatgatatattccatgagcccatcttttcctgcatgtgcaaggagctaaacgatttgcaatatcggacctatgagattgttgctcatcccaccattcataatatggaaatacatgtacggctagacatgtcccaaactatggcagatggcagcaatgatgttggcacctctggcgcaaaggacagtggaaatcaccaagatcatgtagtgctaccagatggagctgagtcagatgcgatgcatcctgaagcaactgatgcagcagatactagaactgattttgattcacacatgccatctgacaaacaggttaacaatgttgaaggagtaactgaacaattaactgataatgagaaagaaactgcagttgttgagaaagcaaccactaatatgggtgacagtgctcaagttgattcacttgataaggaatatcttcaagatgttccagctgatctgcagaggagcacaaatacaaatacacctctgtttgtgctagatgacatgcctggtccagatgtggttctggatagctctgatccagtttctgcacaagcagtggatgatatgaaaggggagttgagtgacattgtccatgacaatgtcaatgcatttgacaataaggatatgccgacttctgagattaccgtactggaatttactcaaaacgcttctggttttcctcagccaacagaggatgaaaatgttctgtccgcaatgggtgaaaattctggattgcaagaaaatcatgtaggatctgttatggatctggacaatatggggcatgacttttcactaaaggaatgcagtgattttggcagtgcgattcagggtgttgacacagattttctgatgtatgatgatgaggtggactgtgatgaggctaatgatgatgagcctaatcctgaggaattccagtctcttgataacagtggatggtcttcacgtactaggggtgttgcaagatatctcaaaactttatttgatgaggaatctggtctgggaagaaagagtgtggccattgatcatctgttaagtggaaagactaggaaagaagcatcaaggatgttttttgagacattggttctgacaacaaaggacttcataagtgtggatcaaccaaactcctttgattttgtcagcgttaagccagggccaaagctcctgaagtcagatttctag</cdnaseq>

Protein Sequence

<aaseq>MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSI IFPEVPIALRLSSHLMLGVVRIYSRKVNYLFHDCSEALLKIKQAFRSTAVDLPPEEST APYHSITLPETFHLDDFELPEAAFQGDIDHHVSTKEQITLQDNPEKTGYSTSQFGLDE RFGDGNSSHIGLDLEEELMLNKDQSIQLEADDGIIIQGRSAVHPTDMEVDDNQNKDES AEGYNMEDGPSSHNKLNPLSADGLVGNSLPNWHTYNVQTPDLNDMLLNNDGNAGPSAS YYQPSPFPCDEPASPEFVSAQAPATPGLMEETVPSRVHESPVLSPQRKASPSSNDETA KTAENANDLVGAETTELALTKPVQIESSGAVQEIDSLSQQCATEELPPQAETSNLEAT MDKSMINTDGVAASGEATAAKETTEVSLVENSLELCADGPTEPVIENQTQFNDGSVDV QGGGQHAPHAILATADSQVNVEASTQEMASNDIPSDLPTLEFPEREKMLSAPDVELYQ ANDLGQVTAEKGTTESDGSNKVGSLTSRKRHLEDSLPALESATTEKLSSRPRGKRTID GIPDDDDLLASILVGRRTPGLRLDSTPIPPKTSSLKRPRLTSKSTTPKRKVQMDDAMV IHADTIRQQLISTEDIRRIRKKAPCTRSEIWMIEKGSLEDDIFHEPIFSCMCKELNDL QYRTYEIVAHPTIHNMEIHVRLDMSQTMADGSNDVGTSGAKDSGNHQDHVVLPDGAES DAMHPEATDAADTRTDFDSHMPSDKQVNNVEGVTEQLTDNEKETAVVEKATTNMGDSA QVDSLDKEYLQDVPADLQRSTNTNTPLFVLDDMPGPDVVLDSSDPVSAQAVDDMKGEL SDIVHDNVNAFDNKDMPTSEITVLEFTQNASGFPQPTEDENVLSAMGENSGLQENHVG SVMDLDNMGHDFSLKECSDFGSAIQGVDTDFLMYDDEVDCDEANDDEPNPEEFQSLDN SGWSSRTRGVARYLKTLFDEESGLGRKSVAIDHLLSGKTRKEASRMFFETLVLTTKDF ISVDQPNSFDFVSVKPGPKLLKSDF</aaseq>

Gene Sequence

<dnaseqindica>9282..9380#8870..8999#8672..8780#8093..8126#7158..7933#6845..6981#6433..6577#5968..6351#5099..5874#4651..4700#4047..4096#3854..3948#3512..3770#430..553#gctgcgagtgcgagtccacacaacactgtgaactcccccctctcgagaaaaaaaaaaagatccaaaattttttcgcccttgggttcgaaatcttcgtgccttcctcctcctcgcggcctccaattcgaacgccccagttgctcgcgccgccgcggattccccagatcccacctcctccccagctcgcgcggcccaattcgaaggcggttctagggtttcccggcacgaatttagggtttcgggggagcttcggggggtgttgttccttgttccgcctagggtttggaatttggggggcgtggagagatgggataaggagggtgttgggagggtgggagctttgcttggggtgtgtgtgtgtttgggtggtgctgagctgagctagggtttggtggtgaggtgctgaggaagggaggtggggggtggaaaatgttctactcgcagttcatcttggccaagaaggggcccctcgggaccatatggatcgcggcgcatttggagcggaagctgcggaagaatcaggtcgcggatacggatatcggcgtctccgtaggtgggtgattttgctgtttcacaagcttttttcttttcggatctactaccatttttttttgtttctgttcgagcatgttagggcctcacacgtagactgctaaagcattgtctttgctaatgctcgtttgtgctgtaggagggggaaaacattttttttctcgcttatttatggttatatgtattcttactgctcatatgttgcgattaattagtaaaagatgttagcttttttgggatagtgttagttcctagttgacctagttgttgctggcagagcaaccatatttttacaactatgctaatgagctgtctcttcatttttgcttatacgtgctcgtctgctggattatcactgttgtactacagtaataggaaaagaaaccacctgtatcaatgcagtcgctgattagcttcttacaactgatagattggtaaaaagtttcaaccttgagttgcactggtcatttggttgttagtattaatgcttcatgtggattttgttatgccatcactagagttgtaaaagctatatgcttttagatgtctgacaaattgcggatatagtgtttttgttctttctcggggacaaagaaaacactaactccctcactagttacaagccacttgttcactaatatgacacaatattttattttattatgtgcttttacagtatccatcgtcgtcgctagttgttttatagatttaatcgtaatagttaagtacagcttattagattgagaatgctggtagcttgccttcaagcagaactactactggactggttttatcacggatatagtggtagagatgagatctctttttttcctctgatgttgctctgttgctaatgctattatatgcaagtcaatccagttcaaaatctgggtttacgatgaccagaattcaatacttctgtgaaggtctcagacaacataagtgcacagggtctgtagagaaggaagcaaaattgtagcataggatttgattgcatgatagctgataatgcatttgtacacagtgaagcttgtgttaaggattggtatctgtgatgcatgtggtatgtaaggacttggttacggaattctagttgaagtgtagcaaacatgagaaagaacatcttttttttagtgccatgatcatgcaatattgtgaagttggttaaggctccgtgatattagctgtcaagtcgtgtctctacacagtgaagcttgtgttaggaataggaatgtgataatttgtaaatgaagcccagcgaacagaaagttatggaatttagaaaagtgtaaagctagttaaatgttgttttgaccaaaaaaaaaaactacacaagcatcattcggacaaatttcaagtaatattggagtgtatatggggaatgccatgagctatccatagattccattcacaactggattggggtgtatatgggaattttattgaaatatgcaaagaggtgcgcccaactaaacaatactccaattcactttcaccatgtacatcactttcctgccaaatttagaaagatatgaggattccaaatacagattaaaataatgttccaaaggtaccaactgatccgtctcattattttttaaagcataccatatacggtcaatatagaggatgcgaacccgacaataaagatatagagagagaggactcaagaaaacctccagtagctgtgtcctgtatgcatgtgcagcaaaatgagtaaaccagaagcttctttggttattttcccatttatttaaaggtaaaagcaggctagagtggcaatggtttgatggagatcaaggctgataacaacattatttccatctccttataccaaatttaatacgtgtctgtttcattgcatgcatattgaagggtgactagtatacgacttgaaccatgtaatttgtaaaataaaataaatacgtgcatgttaacccacttcttacttagaagatcactcaaacctacataagtgtatgtagcatgtaagagccatcgagcaatgtaaggttccatgccatatatgcatgagttatatattgaagaaggaaaagaaatcatgttttgttcgcatatgagaaaaatgcaagctgtcgttgtcttctcatttcgttcttaccattttgggatatatttgttttctttcgtgcaattactgtgtagttacttttatgttcctagcctttttttttccgtattgcttgcatgggttttagtaatgcctgtgtcaatgcatgctatgccaattggttgccagctatctttggtagcctttaattttctccaatggaaaaatgtgatcaatttacttttttatgaatgtaaatattccactacatcggaaatctagtggtgcggtgtacgcgtgaatgcctttggccttgtccaggcactacatatccttccagctgtcctacatcatcctgtagctgcagctgcagtcccacattgctcagtagatccacccctggccaccacatgtccttacatctaatatgttaatttcttctaaaaggatagcattgatgatagaaagcgctgtcacgccatcattgggcaagcaaaccagcttatagcagttaattggtgaaaaacattcaactccattcctttctccaaagataaaaatagaagtacttagatgccacatgtgtctgttatgattctaaatagtactccactatttagtagtataaatacaggaaaaggtttccattataagtttattataacatcaacacatggacttaaaatcttagagcagctgaagcatggcattaactctgcccatgatacagggcaaaccaccatgtgcatcactaaaacactcactagtgcaattcacagaattttgtgatggaaatgttatgttttcctaacagtggtcatatatctgccatatgtctttttttttttcattttgagcttagtattaataatcatttttttcctgcagattcaattatattccctgaagttccgattgcacttcgattatcaagccatcttatgcttggtgtggtcaggatctattctcgcaaggtgaactacctattccatgattgcagtgaagcgttgctgaagataaaacaagcctttaggtctactgccgttgatcttccccctgaagaatcaactgctccttatcattctataacacttccagagacattccatctggatgattttgaattaccggaggctgcatttcaggggtaagttcattggttttgttgtgataagtttgttatttaaaatgtgcccttcaactctcttaagattttccaccatgatccagtgacattgatcatcatgtaagcacaaaagaacagatcaccttgcaagacaacccagagaaaactggatactcaacatcccaatttggcttagatggttggtccttctgtattcacgccatctacttttcgtcatctacttttcaaaatttgaagccagccatttaatcatattaagcatatctctatttacagaaagatttggtgatggcaattcttcacatattgggttggatttggaagaggtaatctcagctaatatatcttttctccaaaaattcattgaaatgtttgtggtcttcatcctgcattatcttgtatgtgctgtttggatctttttttatcatctcagtcttctccgcattatcatagatgtacttccagagtaaatatttactgtcatgctccataacatggcagttcttcacatattggtttgtttttaggtcataatgatagggaatgcagattatgcagatgaaaactcattttgagttgtacaagaatgtttagagcatgaacattgaacataacaatgattttaccatgtaccaattccttgcggccattgtctatgccttgtcttctggttgtatatttggcagctttggttcattacctgttagtaatcaatatttcttttgagtatagggtaacacatggctaatagatgactgattaatggaagctctctatttctggttgttgtgttattgtgtcctatcacttgataaactgcaattccaaaacaaaactttgtatatcttcagcagctaaattttatttgtttccccctcaggaattaatgctgaacaaggaccagtcaattcaacttgaggctgatgatgggtaaaatcacctcttccacttttttttataaaaaatagctattcaagtcccttggaaattttatctacacgtctctgctcccatataaagggtctttgatcctatctaaaggagcctttgtgggttttcacagatgaggttaagtttctctaggcaattttatgttttcctataacttctgaccttatattgtacacttggactgagtctgaatcaacccagggtctagttactactttctcctgatttgagtccagatggccatactggggtgtgacactgatatatttgctacacgtgttgtgatttttttccatgacatttgaaagtggcagcatcttgcatttgcctttttctgtatttttactttatttacattggtttgtgcctctcttcagcattattattcaaggtcgatcagcagttcatcctaccgatatggaagttgatgataaccaaaataaagatgaaagcgctgaaggatacaacatggaggatggaccttccagtcacaacaaactaaatccgttaagtgcagatggtctagtaggaaacagtcttcctaattggcatacatacaatgtgcaaacacctgatctgaatgatatgctattgaacaatgatgggaatgcaggaccatcagcttcatactatcaacctagtcccttcccttgtgatgagcctgcatcaccagagtttgtaagtgcccaggccccggctacacctggcctaatggaagagactgttccttccagagtgcatgaaagtcctgttctgagtccacagcgaaaagcttcaccatcaagcaatgatgaaactgcaaagacagctgaaaatgctaatgatcttgtgggtgctgagacgactgaacttgcattgacaaagcctgtgcaaattgaatcttctggtgctgtacaggagattgattccttgagtcaacaatgtgcaactgaggaattgccaccccaagctgaaacctcaaacttggaagctaccatggacaagtcaatgataaatactgatggtgtagctgcatcaggtgaagctacagctgctaaagaaaccactgaagtgtcattggttgaaaattctttagagctatgcgctgatggtcctactgaacctgtgattgagaaccaaacacagtttaatgatggatcagttgatgtgcaaggtaaattgactattcgttgattttgtttttaaagtcattgtatttgataaaaaaaaggtgaaatcatctgctttttgattatttgttttgcagggggcggtcagcatgcacctcatgctatcttagcaactgcagattcccaagtgaatgtagaagcatcaacacaagaaatggcatctaacgatataccaagtgacctaccaaccttggaatttccagaacgtgagaaaatgctgtcagctccagacgttgaattgtaccaggcaaatgacttgggccaggtaactgcagaaaagggaaccactgaatctgatggaagtaacaaagtaggtagtctcactagcagaaaaagacacttggaggacagtttgccagctctcgaaagtgcaactactgaaaaattgtctagcagaccacgtggtaaaagaaccattgatggtattcctgatgatgatgatttactggcgtctatattaggtatggatgaacctcctcaacaataattgtgcctggcttttgctgcattgtctaacactaactgtgtggacttgtatttagttggtagaaggacccctggactgaggcttgattcaacaccaataccacctaagacgtcatctttgaaacgtccaaggttgacgtcaaagagtaccacaccgaagagaaaagtgcaaatggatgatgccatggttatacatgctgagtatgtatacgcctcatagccttcaaacaagtttgttgaatggaactgtgtgactgttgttctttagtgttatgtccttaaatttctgccatcactgtcttctgatgggaaacaaatagtatattttttccgtatattcttgtaaattttgtgcagtatatacattgagttgattggtccatctctggaaatcagattgcggactattttgctgtccaaattattttctgctgtgatattatttactgagtttcttccattctccagtaccatacggcagcagttgatcagcactgaggatataaggcgcattcgtaaaaaggctccatgtacccgttccgaaatatggatgatcgagaaaggttccttagaagatgatatattccatgagcccatcttttcctgtaagctacttaaattggtttttattctctgcttcctctttacacatttactgtatgttcaattcaattaggaaagaactgaaacagaagtgaaattagttttgatatatgaggataattagtggttagttttatgctctgaaattctactgatgcatgtttgtgttcccaactaggcatgtgcaaggagctaaacgatttgcaatatcggacctatgagattgttgctcatcccaccattcataatatggaaatacatgtacggctagacatgtcccaaactatggcagatggcagcaatgatgttggcacctctggcgcaaaggacagtggaaatcaccaagatcatgtagtgctaccagatggagctgagtcagatgcgatgcatcctgaagcaactgatgcagcagatactagaactgattttgattcacacatgccatctgacaaacaggttaacaatgttgaaggagtaactgaacaattaactgataatgagaaagaaactgcagttgttgagaaagcaaccactaatatgggtgacagtgctcaagttgattcacttgataaggaatatcttcaagatgttccagctgatctgcagaggagcacaaatacaaatacacctctgtttgtgctagatgacatgcctggtccagatgtggttctggatagctctgatccagtttctgcacaagcagtggatgatatgaaaggggagttgagtgacattgtccatgacaatgtcaatgcatttgacaataaggatatgccgacttctgagattaccgtactggaatttactcaaaacgcttctggttttcctcagccaacagaggatgaaaatgttctgtccgcaatgggtgaaaattctggattgcaagaaaatcatgtaggatctgttatggatctggacaatatggggcatgacttttcactaaaggaatgcagtgtaagtccatatagaagtttccacttgtcttcagacacttgtcagatgacttgtgtttctcttaattccacaatgtagcatgctatacagtacttgcactattttattcagtcgttatttgaagtccatggcataattggtatgctgttcacattgcaggattttggcagtgcgattcagggtgttgacacaggtattgccttttgttctgatacataagtgtaaactagtgtagtagtgttctaatataatgtggattatgtgtacaatgctttgtaggtgcagcagaaaactagctaaatacccatgcacagattttctaataaatatatcatcagttcgaaactcaaaaagtgagcatatttatcctgagaatcatatgtaatttgcaagacgcatattacaatgtcaaaataaaaacaatcttattacaagacgcatgctcagatattctaattattcacagaagggtcaggctgactcaagaagtggcggtgggatttcagactcaccataaccaccattcctaggttcttttgtattagtagaaataaacatgacattaaccttcatgactagtgcaatatccgttcttaattgtattttatatgcaaattttgtgatgggaacttccacacgcccgtatgtgacactggtggatcttactgttctagtgttgcatcgcgagaggtttataagttttatgacttgtgtcatatttgtactctacactttcagattttctgatgtatgatgatgaggtggactgtgatgaggctaatgatgatgagcctaatcctgaggaattccagtctcttgataacagtggatggtcttcacgtactaggtacgattggatttcgtgataatattctcagggtttaatgctcaatatttttttgagttctataatgagttgttacaattgctcttcaggggtgttgcaagatatctcaaaactttatttgatgaggaatctggtctgggaagaaagagtgtggccattgatcatctgttaagtggaaagactaggaaagaagcatcaaggatgttttttgagacattggtaagacggttatgcttttctgtttctccactcaagaaatggaatacctaccttcagctccagtgtgattggaggcacctagaattgcatgatcaagaatacgccattcattttatattgcatgtttcgattagccatcttctcattagacaatcttactggcatcaaccaatttctgtagtcattgtcaaactagacctgcaatggtagcttaaattgttttctcgaatcatttctgttgacattatccttggtacttattgtgttctgttccattcacaggttctgacaacaaaggacttcataagtgtggatcaaccaaactcctttgattttgtcagcgttaagccagggccaaagctcctgaagtcagatttctagatcaaaaaccagctagcgtggcgcgatacatacaatcttaccatatctgtcacattaccaacaacatacagatctcgcatcgccgtgaccgtcatttttgttttgttctttttaatttatcctccctctgtagtatccccgcactaatctgtgtttactaggcttcttgggtaggattctgttgtacccccctccgtgttggctattcagtgtatatatgattagctcttgtaaagttgcttgtgtaatgtgatagcatcagctcctaagtccccgtctattgttgctttgaataaaccttcaaacctgtatacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0897800, RefSeq:Os01g0897800