Os01g0951800

From RiceWiki
Revision as of 19:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0951800

Description

Protein prenyltransferase domain containing protein

Version

NM_001051949.1 GI:115442268 GeneID:4325741

Length

3214 bp

Definition

Oryza sativa Japonica Group Os01g0951800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43699083..43702296

Sequence Coding Region

43699319..43699401,43699865..43699928,43700562..43700683,43700792..43700921,43702147..43702239

Expression

GEO Profiles:Os01g0951800

Genome Context

<gbrowseImage1> name=NC_008394:43699083..43702296 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43699083..43702296 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccaagatcgggaggctcgtcggcgccataggcgccttcttctccggcggcgacaacgtcccgtggtgcggccgcgacatcatcgctggtgtcgagagagaggtcgcggaggccgcaaccgaagaacacaagaacgtgagcatcatgaggctatcctgggccctcgtccactcgaggaacacggacgatgtcaaccgtgggatcgccatgctccaagcatctttgggtggctccaagagtccactggaggcaagggagaagctctacttgctggctgttgggcattacaggaatggtgactatcccaggagccggcagcttcttgaacactgtttggagattcaacctggctgggggcaggccctgtctttgaagaagacagttgaagataaaattgctaaagatggtgtgattggcataggtatagccacaacagctgttggactgctggttgggatagctgctgctgttgctcggaagaactga</cdnaseq>

Protein Sequence

<aaseq>MEAKIGRLVGAIGAFFSGGDNVPWCGRDIIAGVEREVAEAATEE HKNVSIMRLSWALVHSRNTDDVNRGIAMLQASLGGSKSPLEAREKLYLLAVGHYRNGD YPRSRQLLEHCLEIQPGWGQALSLKKTVEDKIAKDGVIGIGIATTAVGLLVGIAAAVA RKN</aaseq>

Gene Sequence

<dnaseqindica>2896..2978#2369..2432#1614..1735#1376..1505#58..150#aggctgcgagcgaagccgagccgttttcttccccatcgatcaaggcgatcggcggccatggaggccaagatcgggaggctcgtcggcgccataggcgccttcttctccggcggcgacaacgtcccgtggtgcggccgcgacatcatcgctgtacgtaaaccactcgcacgccaaccctttacccttgtcccctcctttcgatactctccctgtcgccaggggcggagtcacgatctcgggataatttaggcttgtgaacctatctgaggctgtgttccttacctgtagttgggagcaaatccctcccgtacgaaaaataaagcaatccattagtgtgtgattaattaaatattagttaattatattttagtaaatagatcaatatgtttttttaagcaactttcgtatagaatttttttaaaaaaaaacacaccgtttagcagtttgaaaaacgtgcgcgcaaaaaacgaggggagtgagttgaaaactcacacgaacgaactcagcctaaattcttttgagattgtatggaaattttgaaaatatatagggccttattgtttgaagctaaaatgtgctctatcaaattattattggcactttaaatagtactctagataatgtttggttttactaccgaaatatgctaataataacatatatattgataaatttttaacactaccaaaaaatccacgtaggttttgacattgccaacattatagcatggtagctaaccaaacataccaagtaaaattgtcaaatttagctcaaggcttgcattttttttttggctctgccacttcctgttgcctcttgcgtgttgccattcaatagttgatagaaaatactatgtttcatactacctccgcctcaaaatatattgagaaattctcttatatttttgtatggagatagtaatagatagtacaactctatctaaaataactcatctttgatcacagaaatgcaaattaagatagtaaaaaaagactaaagtacttctcattgataatttttttttattccattatttggttggtgtgaaggcatgggaatgtaaggggtattaaaggaacaaaactcatcaatctgcgaattgagataggtcatgcgaaaaagtaaagttattttgtaacatttggtagagactaaagatggacgagataggtcatggaaaaaaaataaagttcctttgtaacagatggtagagagtaaatatagacttattttaggatggagagagtaataatgcagtaggatccaataaactaagtcaagatcgatcactgttggttcgttcttatcctgaattgatcagtagacaaaagtgaaggccagatcattgttgatttgctgtgtctgatctaatcagggtgtcgagagagaggtcgcggaggccgcaaccgaagaacacaagaacgtgagcatcatgaggctatcctgggccctcgtccactcgaggaacacggacgatgtcaaccgtgggatcgccatgctccaaggtaggtgcaatgtaaccacacaatgacacaacaaaacaataatttggcatgtgatgatctaacccagactctgacaaatgttgttcttgtgtttgtgttgcttcctagcatctttgggtggctccaagagtccactggaggcaagggagaagctctacttgctggctgttgggcattacaggaatggtgactatcccaggagccggcagcttcttgaacactgtttggaggtttgctcctgaatcctgatagagtgatatagttgataatatgtgtcatacaaaggatgatctaattgttaataagcttgtcttagcgtgtagccgttaaccgtacaagtcatctgttcatgccaactgttcttgttcgtaaattcaagagatcctatggctcagctttggagttactgagtagattggctacttcagattatctacttaattatacaaataaatcaaatatttcgataaataaacaaataacttaaaacaagtggtacaagtattacattagaagatttttttttttagaaaaatgtcttttttaaagcgtggagtaaataatccgtttaaataataatacaataaatagtatgaaaagaaataagcctaaacgtcttactaagtagatatgcatataccagtttagcaacctgaacatctgttggggtggtgctaatcttgttctgttccgaacagaaaccaaggtattatgcaggagattagatatcttttttttgttaaggccaaaagcttcttaattataatctgtcccaatggggccggactaatgtttgtttagcatctcacatacagtagtcatcttgccattatctaatatccgcagttgccacctgtattcagattcaacctggctgggggcaggccctgtctttgaagaagacagttgaagataaaattgctaaaggtgagataattaaacccaacaatgcaaatgcattgtaccattgttcttttatggtccttctgttcaaggatatagggtattttggagagtaatgcggtcttcgacgtttaactttaaacgactagttttatctgaaatgtttataggaattgtaaaactgttgcatatttttgaattatttttacatgacaaatcaagtgataccacttctttttttttgtgaaacaaatgatagtagtatcatttttgctttagtctaacttttcaggctttcagccttcttccattcgatagtgttaatttgaaacctatcttgagttgtatattttgaagtggcgtaaagtaaggagaccgtaaatcactaaattgtttaatctccatggaacaatggaagtattagcaataaaattaatgagaagtaattaaccttcatccgagcgactgacaagtttgatttatgcagatggtgtgattggcataggtatagccacaacagctgttggactgctggttgggatagctgctgctgttgctcggaagaactgaggcatagcggttccagattgatttatgggaattgagatttctgtcgtcagatactcttttatgctggtgacatttttgttcaagttctagtctgcaagaattccctctttattgacacaatttaaggtagtatgatacagtatgctccgaatgctttacaatctcacctccatctcataattctctatcggacaatattttccacgtgatctttcagaattgagatcaatcaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0951800, RefSeq:Os01g0951800