Os01g0975000

From RiceWiki
Revision as of 19:06, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0975000

Description

Protein of unknown function DUF966 family protein

Version

NM_001052095.1 GI:115442560 GeneID:4324301

Length

1544 bp

Definition

Oryza sativa Japonica Group Os01g0975000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44873648..44875191

Sequence Coding Region

44873936..44874056,44874161..44875068

Expression

GEO Profiles:Os01g0975000

Genome Context

<gbrowseImage1> name=NC_008394:44873648..44875191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44873648..44875191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaatcctagtcgtcatagcaggtcaggtgatggtaatggttgggctagccccgagcggacgatggtgtggaggacggagctcaagaagaagcagatgaagcaggttgtggtgggcgtggtgtactacctgtgccggcaagacgggcagctggatcacccccatttcgtccacgtccacgtcccctccgactccgactccgatcatccgcggccgcgcctccacctccgcgacttcatcgcccgcctcagcgacctccgcggcgccgccatgcccgccgcctactcctggtccgccaagaccacctacaggaggaacgccggctacgtctggcaagacctcaccgccgacgacctcatccccgcgccatcaaccaaccatgaggagtatgtcctcaagggctccccgctgctccaccataactccaatacgcccccgcagcacaggaggtgcatgacatcctttgacctcgccgactatcaccgcaccaccgaccctgtccctgtcccggcggcggcgcagcagtccttaattggcattgatgagatatcacctccaccgtcttcaagcagccccgacgacaccaccacccagcttgttaccctgaagcagaagcaacaggaggaggatggctgcacgccccagcaacaagcggcgacgacaccggcagggcggatgcggacgtcggcgatgctgatgaagctcatctcgtgcggcgcctcctccatcaaggagctgcagggccaagcacaatcacaacgctgccgtgctactgcttggcataacaacaagccggacatcatggaccaccgtgactacttcagtggaagcttgctggacaacaacacaaccacccaccctatcgacctcaccctcaggagatcatcctcttgcaatgcccacaggggacagagtagtaggcttggcgtggtggatcaggatggcgtcccgaggaggcaacagctgcacgccaaatcgacggcggcgcgcatggacagcccggagacagatcagatcagatcatag</cdnaseq>

Protein Sequence

<aaseq>MANPSRHSRSGDGNGWASPERTMVWRTELKKKQMKQVVVGVVYY LCRQDGQLDHPHFVHVHVPSDSDSDHPRPRLHLRDFIARLSDLRGAAMPAAYSWSAKT TYRRNAGYVWQDLTADDLIPAPSTNHEEYVLKGSPLLHHNSNTPPQHRRCMTSFDLAD YHRTTDPVPVPAAAQQSLIGIDEISPPPSSSSPDDTTTQLVTLKQKQQEEDGCTPQQQ AATTPAGRMRTSAMLMKLISCGASSIKELQGQAQSQRCRATAWHNNKPDIMDHRDYFS GSLLDNNTTTHPIDLTLRRSSSCNAHRGQSSRLGVVDQDGVPRRQQLHAKSTAARMDS PETDQIRS</aaseq>

Gene Sequence

<dnaseqindica>1136..1256#124..1031#attagctagctagcttgttcctccgtcggctcgggcggtcctcttcgaattggatcttcttcttctactcacatacacacacactcgatcttgtgcctctgcagcacacggtagtgttggttgatggcaaatcctagtcgtcatagcaggtcaggtgatggtaatggttgggctagccccgagcggacgatggtgtggaggacggagctcaagaagaagcagatgaagcaggttgtggtgggcgtggtgtactacctgtgccggcaagacgggcagctggatcacccccatttcgtccacgtccacgtcccctccgactccgactccgatcatccgcggccgcgcctccacctccgcgacttcatcgcccgcctcagcgacctccgcggcgccgccatgcccgccgcctactcctggtccgccaagaccacctacaggaggaacgccggctacgtctggcaagacctcaccgccgacgacctcatccccgcgccatcaaccaaccatgaggagtatgtcctcaagggctccccgctgctccaccataactccaatacgcccccgcagcacaggaggtgcatgacatcctttgacctcgccgactatcaccgcaccaccgaccctgtccctgtcccggcggcggcgcagcagtccttaattggcattgatgagatatcacctccaccgtcttcaagcagccccgacgacaccaccacccagcttgttaccctgaagcagaagcaacaggaggaggatggctgcacgccccagcaacaagcggcgacgacaccggcagggcggatgcggacgtcggcgatgctgatgaagctcatctcgtgcggcgcctcctccatcaaggagctgcagggccaagcacaatcacaacgctgccgtgctactgcttggcataacaacaagccggacatcatggaccaccgtgactacttcagtggaagcttgctggacaacaacacaaccacccaccctatcgacctcaccctcaggagatcatcctcttgcaatgcccacaggtaccagttttttttatttacatatactgcgtaacacattactagttaattaatttgatcaacaaattaatccctcttgattatattattgaattgaattgcaggggacagagtagtaggcttggcgtggtggatcaggatggcgtcccgaggaggcaacagctgcacgccaaatcgacggcggcgcgcatggacagcccggagacagatcagatcagatcatagaggaggggatcagcaagctaagctaagctaagctaatgctcttgtcaggcaactcatccatcgaatgataccaaaatgtttcttctgttactagtactacactagttagttattttatttccctttttttttcatttcaacaagttagtttgttcgtttgagcgcgcgattcgatcagttggtgtgaaaacgaaaacgaaaacgatggaacacacgtataaaaacatctgtgtaatctcgtcttttattaacttaagggaatcaatcaatgtcagatgattgtcaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0975000, RefSeq:Os01g0975000