Os10g0548000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os10g0548000 |
|---|---|
| Description |
Similar to Short-chain dehydrogenase Tic32 |
| Version |
NM_001071832.1 GI:115483259 GeneID:4349296 |
| Length |
3336 bp |
| Definition |
Oryza sativa Japonica Group Os10g0548000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:21895565..21898900 |
| Sequence Coding Region |
21895666..21895836,21895942..21895988,21896217..21896301,21896418..21896496,21896924..21897077 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:21895565..21898900 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:21895565..21898900 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtggtttttcaacttcaaccgaaatggcccctctggcttctccggcgcctccaccgccgaggaggtcaccgccggcgtcgacgcccggggcttggccgccgtcgtcacaggcgcgtcgagcggcatcgggctggagacgacgcgcgtgttggcgctgcgcggcgtgcgcgtcgtcatggccgtgcgcaacgtcgccgccgggcacaaggcccgcgaggcgatccgggcggagatccacggcgccatagtccatgtgctggagatggacctcagctccatggattcggtgaggaggtttgcctccgagtttgactctctgaacctacctctcaacatactcatcaataacgctggaatcctgtccaaggactgcatacgctccattgacggcctagaattgcattttgcaactaatcacattggccattttcttctaacgaatcttttactggagaacatgaagagcacaagtaggacaactggtgtcgaaggaaggatcataaatgtgtcgtcttcggggcacattttgacctatcctgaagggatatgtttcgatagtgtaaaagatctttcgagattctccacttatattgcttacggccagtccaagcttgccaacattttgcactctaccgagcttgcacgaattctgaagggagatggtgtgaacatttcagcaaatgcgatccatcccggttttgttggaaccaacctattcaagaactggactatggctaatgctgtggtgaacaccattggaagaatcgtatgtaaaactgtagaacagggtgctgcaacgacatgttatgtggcattacatcctcaagttactggaataagtgggaagtacttcagcaactgcaatttagagaccccaagctcacaggcttcaaatgcagagttggccaagaaactatgggaatttagctccaacattgtgtcggctgccaaactgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MWFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASSGIG LETTRVLALRGVRVVMAVRNVAAGHKAREAIRAEIHGAIVHVLEMDLSSMDSVRRFAS EFDSLNLPLNILINNAGILSKDCIRSIDGLELHFATNHIGHFLLTNLLLENMKSTSRT TGVEGRIINVSSSGHILTYPEGICFDSVKDLSRFSTYIAYGQSKLANILHSTELARIL KGDGVNISANAIHPGFVGTNLFKNWTMANAVVNTIGRIVCKTVEQGAATTCYVALHPQ VTGISGKYFSNCNLETPSSQASNAELAKKLWEFSSNIVSAAKL</aaseq> |
| Gene Sequence |
<dnaseqindica>3065..3235#2913..2959#2600..2684#2405..2483#1824..1977#1660..1739#1350..1581#1142..1253#gttggaagaagaagaggaagtggttgcgccgacgacgaggtgagcgggttgacggaggaggaggcagcgcgcgccggcttcgggtgtcgttgtccctgctcgccaggtgctcggtacaatgccccactgtgcgctttgtttcttcagaatattagtagaactctttgaaagaagttagaagttagtaccttgttctcttcggaatgtttgttttcctatgttcttagggtgcatggcatcatttgtgatgctgttagaaatggtcaaaccacttaaatcaccaattggcattggcacacttggaattaacttggaagtgatttgttcatgcatattgatatcagcgtctccatcgcctgcagttgctcctccagactgcagctagcgtgacgagaaacatcttcttgagacgatatcagaaggttttctctacaagcttcccttcgatcgtgtagccagcatctgtaggctatagctcgttagctgtaaaacttgtgctagctcgtttattggttctttcatttgtttcctgttagtcagtttctcctcccccagttttttagcttgttctcttctgttttccagtcgagtgcatgactgcgatttgctcggtcgtgcacatgtcgagcttgacgtgcgcttagtccgcacggagcgcgtcgcgcggcttgatcccacgtttttactttctgtactgaataaaaggaagaaaaaacagagaaaatgctggaacgtttctacgcagcgccaaaacacacctgagttcatcgtgttcttgtgttcattctctctcgcgttctctgctcgagtgactgtggttgcaggttgtcgctgacatactgctgagcagaaaaccagcacccatcggcttagtacctgtctgctctgctgtctcagcctctcaggtcagctgtctttatcttactaaataaattattctgcgaatttttgaagaaaaatcaaacttttagtactttggaagagtagcaaactagattgctttggccacatcacatgctatcactgtcagagccataccttagcaacagcatttagcctgtatatgtatatatcatcggagtaatctatgccgaactttactcaggttgcaaaccccatatcccagagctcgacgccacccatgtggtttttcaacttcaaccgaaatggcccctctggcttctccggcgcctccaccgccgaggaggtcaccgccggcgtcgacgcccggggcttggccgccgtcgtcacaggtacaatcattcaaccaatgttgctgccatgccatttaattaagctcgcaaccttggtcagagagattcagagtgaacttgacgacctggctgcaggcgcgtcgagcggcatcgggctggagacgacgcgcgtgttggcgctgcgcggcgtgcgcgtcgtcatggccgtgcgcaacgtcgccgccgggcacaaggcccgcgaggcgatccgggcggagatccacggcgccatagtccatgtgctggagatggacctcagctccatggattcggtgaggaggtttgcctccgagtttgactctctgaacctacctctcaacatactcatgtaagaacagaaacacgggtcaactcgaacagcgaatttaacctgtgctatactgattcaaacttacttttacgacagcaataacgctggaatcctgtccaaggactgcatacgctccattgacggcctagaattgcattttgcaactaatcacattggtatgcgaaattgcatatggcattcctcgtgcatctcgatattgcttaattgtggattgattgcttttatgacttgaatgacaggccattttcttctaacgaatcttttactggagaacatgaagagcacaagtaggacaactggtgtcgaaggaaggatcataaatgtgtcgtcttcggggcacattttgacctatcctgaagggatatgtttcgatagtgtaaaagatctttcgaggtaattaataaattccgagactctaaaaattaggactaactagctaggccatttttgcatttcaaggagcatagatatgatgtcgattctaacaatataactctgttttacattattcttaacaatataactctgttttacattacagacacaaggaggtaatttcctgtcatccattagagaattggatgaccaaaatcattcttcttttacatttaagaatcaatacattcaggagggccatctcggccatccttgagttaaaagaaaatatttcttccagcggtttatgttaatctgttccttttatttattggttaatgtaagaactttagcttttgtcattctaatgttaacatgaggaattaaggggcctccaattagtaaagataaatatatttattgtgcacttgatttatcttaccagattctccacttatattgcttacggccagtccaagcttgccaacattttgcactctaccgagcttgcacgaattctgaaggtagtgttcttatttgctaagcatgcctatgagtaaattttgtatgttgtctctgtttgcatatgattatagccaaatctatgaatcataagttggaaaccgttaagtatgaatagggagatggtgtgaacatttcagcaaatgcgatccatcccggttttgttggaaccaacctattcaagaactggactatggctaatggtaatccctagacctttcaatgcaaaattgttgaagatatttttggaataaattagtagtacttgaagaagcatactcttcaaaatattaatttgggatgattcccaaacattttgatccttgctgtctggcgtggaaaggttgcatctcctaaacacatgatgctatttgtgaatgcatctccttttataccattataccattttcaattgttcttctccattacagctgtggtgaacaccattggaagaatcgtatgtaaaactgtagaacaggtgaactttttttaaaaaaaatgaaaaatctcgtcttttatatatgttgttatgttgtagtgtggaacatctaggcgactctaacctcgtgatattattttttagggtgctgcaacgacatgttatgtggcattacatcctcaagttactggaataagtgggaagtacttcagcaactgcaatttagagaccccaagctcacaggcttcaaatgcagagttggccaagaaactatgggaatttagctccaacattgtgtcggctgccaaactgtagtttgagttattcatatatgcatgcgctacattttatttcgtgtaagccgaacataaaattttcatagaaagtctacaaataaagagagtgtagttcctccc</dnaseqindica> |
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