Os09g0299200

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0299200

Description

Homeodomain-like containing protein

Version

NM_001069348.1 GI:115478435 GeneID:4346661

Length

3730 bp

Definition

Oryza sativa Japonica Group Os09g0299200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7895272..7899001

Sequence Coding Region

7896529..7896670,7896879..7896955,7897046..7897088,7897176..7897233,7897822..7897891
,7898102..7898578

Expression

GEO Profiles:Os09g0299200

Genome Context

<gbrowseImage1> name=NC_008402:7895272..7899001 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7895272..7899001 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaattaggtggcaacaatatgggcccagataatggagcaaacaacaattccaacttggctgcaaggcaacgcttacggtggacaaatgagctgcacgaacgatttgttgaggctgttactcaacttggtggtcctgatagagcaactccgaaaggagttctaagaattatgggtgtacaagggttgacgatataccatgtgaaaagtcatttgcagaaatacaggcttgcaaagtacattcccgactcttcagctgatggtaacaaggctgaaaacaaagaccctggagatttgcttgctggacttgagggatcctctggcttacagatatctgaagctctgaagctgcagatggaggtccaaaagcgtctacatgaacagttagaagtacaaaggcagctgcagttgcgcattgaggcgcagggcaagtacctcaagaagatcattgaggagcagcagcgtctcggtggagtgaaatctgaaacacctgctgctggtgcttccgtcacattgccaagcgatcagttccctgattccgaaagaactgacccctcgactcctgcacctacatctgaatctccaactcaaggtgtaccttcgaatagggacaatggaggacaaaacgaagcaaccaagagcccccagcgcgatgattctctgtcccgccatgaaccactaacccctgattccaactgtcagcctggttctcctaccgctagtccaaagcatgagagggcagcaaagaggcaacgaggtaatggtgcagagttctcggaaactgacttcgcccttcctcattctatcttcgagtcgagttcggggtcagagttccaacaatgttccatgtcctactcaggtcattag</cdnaseq>

Protein Sequence

<aaseq>MELGGNNMGPDNGANNNSNLAARQRLRWTNELHERFVEAVTQLG GPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRLAKYIPDSSADGNKAENKDPGDLLAG LEGSSGLQISEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLGGVK SETPAAGASVTLPSDQFPDSERTDPSTPAPTSESPTQGVPSNRDNGGQNEATKSPQRD DSLSRHEPLTPDSNCQPGSPTASPKHERAAKRQRGNGAEFSETDFALPHSIFESSSGS EFQQCSMSYSGH</aaseq>

Gene Sequence

<dnaseqindica>1258..1399#1608..1684#1775..1817#1905..1962#2551..2620#2831..3307#ggccacacacacctacgcctacgcggggaagagaagacgagacaagaagaggagaggagagaagagaatctcgtggaattctctccccctctcctcgcctctccaagaacccaccaatcctccccccctccccccccaacactccactggcgccgcacagctccgatcttgcctccgccgccgccttcttccgctcccaattcgggcccgaattcggtccggggggggtttcttggtgcgtcagcgtttcccccccccccccccccccccaaaatttactttgcctctgtagagagaattcccggtaaatttgtgcgtgtttttttgctttccgtgttgagatgttattgctctcgcttttgttcccccaatggaaaagggaaaaaatgcaagcgaggagaggaaaaaaaaaagggcttcctgaggctgacaggtcgggcccacctccgccggagatggcgtgtggcttgcgctgtttgtgatgagttctctggtggtagtaggttggcatatacggggtgctctttgctttgagcatggagctgcaattcgctttgctttgatttcatctttttctactgtgcaattgaagggcatcaagaacatcatgtatcaaagctaatttcatatgtctggcgataggttgtgtgggttgctcccatggagctctttaccttttttttgcctggttataaattgagagcaaaataaataaatactaatggatgataattcgattgatgcaccatgcaagctgtggatgcaagtattcgccttaactatgtatgctggctggttttctgttagagctttgcatctaccatttttatgggtcactctatttgcctaaccttccatgtaaagcagtatggtatgatgaatcaaattggatagatgtattggacagcgttgcacacgctagttttcttggtacaaatggcattttccttgtctatactagtactagtagttctttcctctgcaacaatgaaaacttccctatgtagttaagctcacaaattctagaaacacttgtgactgtcttagagatggacagaaaactgccactgcaactttgcactgattagttgtgtttttgtacttttatcaccggcaaacattgtttgtgatcgctgtttgtaaaactgatatctggctctctgatgtattttttcccaggtgatgatcattgtattaaccaaaacctgaacctagtgttggccctactgtaataattcagtcacttatcagcagcatatggaattaggtggcaacaatatgggcccagataatggagcaaacaacaattccaacttggctgcaaggcaacgcttacggtggacaaatgagctgcacgaacgatttgttgaggctgttactcaacttggtggtcctgatagtatgtattcatactgcaattgttgcaattatgttttcatttattcatttatttgattttatcaaacttatatagagactgttctgtatgatgcttttcttggagacaataactttactgcatgcatgtaatcatgctctcttaccattgaacttattaactgtaaatttctgcttctgctaacacttgaattcctcaaatgcaacaggagcaactccgaaaggagttctaagaattatgggtgtacaagggttgacgatataccatgtgaaaagtcatttgcaggtacatcttgttacagtgtgtcactttccctttaatattttttgtagctagtattttttttatcctatttaattcccctcctgtttctagaaatacaggcttgcaaagtacattcccgactcttcagctgatggtacgcggacaatctcttcatcatgcattgcattttttagtactctggcattcttttagcttatcctaatttttgtctccttggtaggtaacaaggctgaaaacaaagaccctggagatttgcttgctggacttgagggatcctcgtaagtatacataagcctaattatttctccgatatcatatcagtcgttttgtaaaaagaaaaaagaaatgctactgacatactgttatggtatgaaatggaagtatgctggtttgccacattttaccatttaccagtaaatctaccatgaccaactattgaaattattaccattgttgtttgcatgctgccatgctgctcggcaaatatcgctttctagattgtagtccctctgtagttgaaagtatcaaggaataataggctgctgctggattgagattgaaactactactagtattttacacataatttcttctgcccaccatttttggctttcaacatcctcaagaacataaatcctagatactagaaaacaacaaaatatgtgaaataacttaagtctgattaatatgctttttccttttagttgaaaaaattaagtcatttgttattgtgctttctatttatcttctgtaagatttcaatgcctatttatcttttcaatggacagttccattatgttactgttcgattggtgctgttctccacctcaatagtcaatattcatcgtgatattttttttgtacagtggcttacagatatctgaagctctgaagctgcagatggaggtccaaaagcgtctacatgaacagttagaagtaagtttttgtggaagttcctttcagcataaaattgttagcttctaacatttgtactccatccttatatatttattaagcctattccgaagttactaaaatattccaaatctatgcaaagaaattgttctggatgcacatattcttcaaatctttgtgaaatatccagcaaagagcaggccctaatgatatgataaacattctcttcaggtacaaaggcagctgcagttgcgcattgaggcgcagggcaagtacctcaagaagatcattgaggagcagcagcgtctcggtggagtgaaatctgaaacacctgctgctggtgcttccgtcacattgccaagcgatcagttccctgattccgaaagaactgacccctcgactcctgcacctacatctgaatctccaactcaaggtgtaccttcgaatagggacaatggaggacaaaacgaagcaaccaagagcccccagcgcgatgattctctgtcccgccatgaaccactaacccctgattccaactgtcagcctggttctcctaccgctagtccaaagcatgagagggcagcaaagaggcaacgaggtaatggtgcagagttctcggaaactgacttcgcccttcctcattctatcttcgagtcgagttcggggtcagagttccaacaatgttccatgtcctactcaggtcattagcatctggtgatactcctcacagcatcttcgctagcttgttcgagacgaagtaatgatctaagatccgtgttgtagctctcagtagtatatttctaagtcccaatggagatgttggtagacaaaaatgttgtaggtgttcagatgattgtttacatgatactacatatgacagctatttaagcttgtaatttcgtggcctgtaaattttattatcagctgttgagttgggaagtttgaaggttgcgctttgtcgcggcgtcgacttctgctcatctgggtaaatctttattgacaaaagtgtttaacatgaacaatttttcgcgtgtaatttgttgtaaacttgtaatggtcagtggtcagaagcacaagctgttgatgttatgctgttacacttggatgttactatcatggttacttttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0299200, RefSeq:Os09g0299200