BGIOSGA027393

From RiceWiki
Revision as of 17:07, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA027393

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027393, complete gene.

LocusTag

OS08G0241800

Ensembl Transcript ID

BGIOSGA027393-TA

Ensembl Protein ID

BGIOSGA027393-PA

Length

3570

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9252147..9255716

Sequence Coding Region

9254670..9255716,9254311..9254560),complement(9254042..9254206,9253716..9253954),complement(9253554..9253586
,9253369..9253450),complement(9253122..9253282,9252852..9253022),complement(9252531..9252713
,9252147..9252440

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9252147..9255716 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9252147..9255716 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTGGCGGCGATCATGGCGATCGCGCTGGCGAACGGCGGCGGGCGGCCGCCGGACTGGCAGGACTTCGTCGGGATCATCGCGCTGCTGTTGATCAACTCCACCATATCCTACTGGGAGGAGAGCAACGCCGGCAGCGCCGCGGCGGCGCTCATGAAGAACCTCGCCCCCAAGACCAAGGTGCTCCGCGACGGCAGGTGGTCGGAGACCGACGCCTTCGTCCTCGTCCCCGGCGACGTCATCAACGTCAAGCTCGGCGACATCGTCCCCGCTGACGCCCGCCTCCTCGACGGCGATCCCCTCAAGATCGACCAGTCGGCGCTCACCGGCGAGTCCCTGCCGGTCACCAAGCTCCCCGGCGACTGCGTCTACTCCGGGTCGACGTGCAAGCAGGGGGAGATCGACGCCGTCGTCATCGCCACCGGCGTCCACACCTTCTTCGGCAAGGCGGCGCACCTCGTCGACACCACCAACCAGGTCGGCCACTTCCAGAAGGTGCTCCGCGCCATCGGCAACTTCTGCATCGGCGCCATCGCCATCGGCATGGCCGTCGAGGTCATCGTCATGTACCTGATCCAGCACCGCCTCTACCGCGACGGCATCGACAACCTCCTCGTGCTGCTCATCGGCGGCATCCCCATCGCCATGCCCACCGTGCTGTCAGTCACCATGGCCATCGGCTCGCACCGCCTCTCTGACCAGGGCGCCATCACCAAGCGGATGACGGCGATCGAGGAGATGGCCGCCATGGACGTGCTCTGCAGCGACAAGACCGGGACGCTCACGCTGAACAAGCTCAGCGTCGACAGGGGCCTCATCGAGGTGTTCGTCCAGGGCGTCGCCAAGGACGAGGTGATCCTCCTCACCGCCAGGGCGTCGCGTGTCGAGAACCAGGACGCCATCGACACCGCCATGGTCGGCATGCTCGACGACCCCAAGGAGGCACGCGCCGGCATCCGGGAGGAGCACTTCCTCCCCTTCAACCCCGTCGACAAGCGCACCGCCCTCACCTACGTCGACCTCGCCGACGGCTCATGGCACCGTATTCTGGATCTGTGCAAATGCAGACAGGACGTGAGGAGCAAGGTGCACGCCATAATCGACAGGTACGCCGACCGGGGCCTCCGGTCGCTCGCCGTGGCGAGGCAGGAGGTGCCGGAGAGGAGGAAGGACGGCCCCGGCGGGCCGTGGGAGTTCGTTGGCCTGCTGCCGCTGCTCGACCCGCCGCGCCACGACAGCGCCGAGACCATAAGGCGGGCGCTCCACCTCGGCGTCAACGTCAAGATGATCACCGGTGATCAGCTCGCCATTGCCAAGGAGACCGGGAGGAGGCTCGGGATGGGCGTGAACATGTACCCCTCGTCGGCGCTGCTCGGCCAGAGCAAGGACGAGTCCATCGCCTCCGTCCCCGTCGACGAGCTCATCAAGAAGGCCGACGGCTTCGCCGGCGTCTTCCCAGAGCACAAGTACGAGATTGTGAAGAAGCTGCAGGAGATGAAGCACATCTGCGGGATGACCGGCGACGGCGTGAACGACGCGCCGGCGCTGAAGAGGGCGGACATCGGGATCGCCGTCGCCGACGCCACCGACGCGGCGAGGAGCGCCTCGGACATCGTGCTCACCCAGCCTGGCCTCAGCGTCATCATCAGCGCCGTCCTCACCAGCCGCGCTATCTTCCAGAGGATGAAAAATTACACGATTTACGCGGTGTCGATTACTATCCGTATTGTGCTTGGATTCATGCTGATTGCTCTCATCTGGAAGTTCGATTTCTCACCGTTCATGATCCTCGTCATCGCGATCCTCAACGACGGAACGATCATGACAATATCCAAGGACAGGGTGAAGCCGTCGCCGCACCCGGACAGCTGGAAGTTGCCGGAGATCTTCATCACCGGCATCGTCTACGGCACCTACCTCGCCGTCATGACCGTCCTCTTCTTCTGGGCCATGAGGAGCACCGATTTCTTCACCAGCACGTTCCATGTGAAGCCACTGATGGAGAAGGACGAGATGATGTCGGCACTGTACCTGCAGGTGAGCATCATCAGCCAGGCGCTCATCTTCGTGACGCGCTCCCGCAGCTGGTGCTTCGTCGAGCGCCCCGGCATGCTGCTCTGCGGCGCCTTCGTCGCCGCGCAGATCATCGCGACGCTGGTGACGGTGTACGCCACCTTGGGGTTCGCCCACATCAAGGGCATCGGCTGGGGGTGGGCCGGCGTCATCTGGCTCTACAGCATCGTCACCTTCCTCCCCCTCGACATCTTCAAGTTCGCCGTCCGCTACGCCCTCAGCGGCCGCGCCTGGGACACCCTCATCGAGCACAAGATTGCCTTCACGAGCAAGAAGGATTACGGGAGAGGGGAGAGGGAGGCGCAGTGGGCGACGGCGCAGAGGACGCTGCACGGGCTGCAGACGCCGGAGATGGGGGACCACCTCGGCGGCGTCGGCGGCGGCGAGCGGAGCAGCTACAGGGAGCTCTCGGAGATCGCCGAGCAGGCCAAGCGCCGCGCCGAGGTGGCCCGGCTGCGCGAGCTCAGCACGCTCAAGGGCCAGATGGAGTCCACCGTCAGGCTCAAGGGCCTCGACATGGACAACGTCCAGCACCACTACACCGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEVAAIMAIALANGGGRPPDWQDFVGIIALLLINSTISYWEESNAGSAAAALMKNLAPKTKVLRDGRWSETDAFVLVPGDVINVKLGDIVPADARLLDGDPLKIDQSALTGESLPVTKLPGDCVYSGSTCKQGEIDAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLRAIGNFCIGAIAIGMAVEVIVMYLIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSDQGAITKRMTAIEEMAAMDVLCSDKTGTLTLNKLSVDRGLIEVFVQGVAKDEVILLTARASRVENQDAIDTAMVGMLDDPKEARAGIREEHFLPFNPVDKRTALTYVDLADGSWHRILDLCKCRQDVRSKVHAIIDRYADRGLRSLAVARQEVPERRKDGPGGPWEFVGLLPLLDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGVNMYPSSALLGQSKDESIASVPVDELIKKADGFAGVFPEHKYEIVKKLQEMKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTQPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMILVIAILNDGTIMTISKDRVKPSPHPDSWKLPEIFITGIVYGTYLAVMTVLFFWAMRSTDFFTSTFHVKPLMEKDEMMSALYLQVSIISQALIFVTRSRSWCFVERPGMLLCGAFVAAQIIATLVTVYATLGFAHIKGIGWGWAGVIWLYSIVTFLPLDIFKFAVRYALSGRAWDTLIEHKIAFTSKKDYGRGEREAQWATAQRTLHGLQTPEMGDHLGGVGGGERSSYRELSEIAEQAKRRAEVARLRELSTLKGQMESTVRLKGLDMDNVQHHYTV</aaseq>

Gene Sequence

<dnaseqindica>1..1047#1157..1406#1511..1675#1763..2001#2131..2163#2267..2348#2435..2595#2695..2865#3004..3186#3277..3570#ATGGAGGTGGCGGCGATCATGGCGATCGCGCTGGCGAACGGCGGCGGGCGGCCGCCGGACTGGCAGGACTTCGTCGGGATCATCGCGCTGCTGTTGATCAACTCCACCATATCCTACTGGGAGGAGAGCAACGCCGGCAGCGCCGCGGCGGCGCTCATGAAGAACCTCGCCCCCAAGACCAAGGTGCTCCGCGACGGCAGGTGGTCGGAGACCGACGCCTTCGTCCTCGTCCCCGGCGACGTCATCAACGTCAAGCTCGGCGACATCGTCCCCGCTGACGCCCGCCTCCTCGACGGCGATCCCCTCAAGATCGACCAGTCGGCGCTCACCGGCGAGTCCCTGCCGGTCACCAAGCTCCCCGGCGACTGCGTCTACTCCGGGTCGACGTGCAAGCAGGGGGAGATCGACGCCGTCGTCATCGCCACCGGCGTCCACACCTTCTTCGGCAAGGCGGCGCACCTCGTCGACACCACCAACCAGGTCGGCCACTTCCAGAAGGTGCTCCGCGCCATCGGCAACTTCTGCATCGGCGCCATCGCCATCGGCATGGCCGTCGAGGTCATCGTCATGTACCTGATCCAGCACCGCCTCTACCGCGACGGCATCGACAACCTCCTCGTGCTGCTCATCGGCGGCATCCCCATCGCCATGCCCACCGTGCTGTCAGTCACCATGGCCATCGGCTCGCACCGCCTCTCTGACCAGGGCGCCATCACCAAGCGGATGACGGCGATCGAGGAGATGGCCGCCATGGACGTGCTCTGCAGCGACAAGACCGGGACGCTCACGCTGAACAAGCTCAGCGTCGACAGGGGCCTCATCGAGGTGTTCGTCCAGGGCGTCGCCAAGGACGAGGTGATCCTCCTCACCGCCAGGGCGTCGCGTGTCGAGAACCAGGACGCCATCGACACCGCCATGGTCGGCATGCTCGACGACCCCAAGGAGGCACGCGCCGGCATCCGGGAGGAGCACTTCCTCCCCTTCAACCCCGTCGACAAGCGCACCGCCCTCACCTACGTCGACCTCGCCGACGGCTCATGGCACCGTGTCAGCAAGGGCGCCCCCGAGCAGGCAACCCACCCTCATCCATGGATCCCGATTCGATTCGATCTTTCGTCGCCGCCATTGCTCACTTGCTTGCTTGTTGATCTTGCAGATTCTGGATCTGTGCAAATGCAGACAGGACGTGAGGAGCAAGGTGCACGCCATAATCGACAGGTACGCCGACCGGGGCCTCCGGTCGCTCGCCGTGGCGAGGCAGGAGGTGCCGGAGAGGAGGAAGGACGGCCCCGGCGGGCCGTGGGAGTTCGTTGGCCTGCTGCCGCTGCTCGACCCGCCGCGCCACGACAGCGCCGAGACCATAAGGCGGGCGCTCCACCTCGGCGTCAACGTCAAGATGATCACCGGTACACCTCAACCCACGCCCAGCTGCTTTTCGTCGAACACATGGTGGGTGTGCAAATGCAGTCCGTGATCCTGTGATTTGCTTGCGTTGCCATTGCTGGTGCAGGTGATCAGCTCGCCATTGCCAAGGAGACCGGGAGGAGGCTCGGGATGGGCGTGAACATGTACCCCTCGTCGGCGCTGCTCGGCCAGAGCAAGGACGAGTCCATCGCCTCCGTCCCCGTCGACGAGCTCATCAAGAAGGCCGACGGCTTCGCCGGCGTCTTCCCAGGTACACGAATTATATGCATTCTCAAAGCCGCCATGGCCGGACTTGCAGGTTCTCAAAGTCGCCATTGTCGTCTGTCTTGTGGTGCAGAGCACAAGTACGAGATTGTGAAGAAGCTGCAGGAGATGAAGCACATCTGCGGGATGACCGGCGACGGCGTGAACGACGCGCCGGCGCTGAAGAGGGCGGACATCGGGATCGCCGTCGCCGACGCCACCGACGCGGCGAGGAGCGCCTCGGACATCGTGCTCACCCAGCCTGGCCTCAGCGTCATCATCAGCGCCGTCCTCACCAGCCGCGCTATCTTCCAGAGGATGAAAAATTACACGGTACAGCATTTGTCTTGGCTGCATTCAGAATGAATTTGAGAGCATGAATTTCTCGATCAGAATCATCAGAGATTGATTTTTTTTTTTTACTGATGATCATTGTTTCCATGTTGTTTATGATCTCTCCAGATTTACGCGGTGTCGATTACTATCCGTATTGTGGTAAGTAAACTGTTCTTGCTGCTATTCCTTCAAGGATCTCATCAACCTGACCAACAATGCCATGAAATTCGTCTGAAAATTTTCCCCTGTTGTCAATCTGAAGCTTGGATTCATGCTGATTGCTCTCATCTGGAAGTTCGATTTCTCACCGTTCATGATCCTCGTCATCGCGATCCTCAACGACGGTGAGTTCTTGAACACAACAAAAATTGAACTTCTGATCCACACACACACACACAATTTTAGCTGATGTACCTGATTGATGATGCAGGAACGATCATGACAATATCCAAGGACAGGGTGAAGCCGTCGCCGCACCCGGACAGCTGGAAGTTGCCGGAGATCTTCATCACCGGCATCGTCTACGGCACCTACCTCGCCGTCATGACCGTCCTCTTCTTCTGGGCCATGAGGAGCACCGATTTCTTCACCGTAAGCAAACAATCAAACAAACAGATCCAAAGAATCCTCAAAAACCTTTTGATTCCACTGCTCTGATCGAATTCAAATTGAATTTGGTTGTGTGCGCAGAGCACGTTCCATGTGAAGCCACTGATGGAGAAGGACGAGATGATGTCGGCACTGTACCTGCAGGTGAGCATCATCAGCCAGGCGCTCATCTTCGTGACGCGCTCCCGCAGCTGGTGCTTCGTCGAGCGCCCCGGCATGCTGCTCTGCGGCGCCTTCGTCGCCGCGCAGATCGTAAGCATCTCGATCTCCATCTTCTTGTTCTTAGCTGCTGCAACTGCAAATGCCAATGCCATTGCCGCCATTGATGGACTGATTTGGTGCTGCAAATGCCAATGCCATTGCCGCCATTGATGGACTGATTTGGTGCAGATCGCGACGCTGGTGACGGTGTACGCCACCTTGGGGTTCGCCCACATCAAGGGCATCGGCTGGGGGTGGGCCGGCGTCATCTGGCTCTACAGCATCGTCACCTTCCTCCCCCTCGACATCTTCAAGTTCGCCGTCCGCTACGCCCTCAGCGGCCGCGCCTGGGACACCCTCATCGAGCACAAGGTAACCTTGCCATAACAACAAACACCTTGCCTGCATGTGTTTTTCTCCTCGCGGAATAACTACAAACACCTTGCGTGCGTGCGCGTGCAGATTGCCTTCACGAGCAAGAAGGATTACGGGAGAGGGGAGAGGGAGGCGCAGTGGGCGACGGCGCAGAGGACGCTGCACGGGCTGCAGACGCCGGAGATGGGGGACCACCTCGGCGGCGTCGGCGGCGGCGAGCGGAGCAGCTACAGGGAGCTCTCGGAGATCGCCGAGCAGGCCAAGCGCCGCGCCGAGGTGGCCCGGCTGCGCGAGCTCAGCACGCTCAAGGGCCAGATGGAGTCCACCGTCAGGCTCAAGGGCCTCGACATGGACAACGTCCAGCACCACTACACCGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027393