Os11g0156000

From RiceWiki
Revision as of 21:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0156000

Description

Similar to AP2 domain containing protein RAP2.8 (Fragment)

Version

NM_001072324.1 GI:115484260 GeneID:4349821

Length

1855 bp

Definition

Oryza sativa Japonica Group Os11g0156000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2614921..2616775

Sequence Coding Region

2615636..2615648,2615748..2615940,2616056..2616689

Expression

GEO Profiles:Os11g0156000

Genome Context

<gbrowseImage1> name=NC_008404:2614921..2616775 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2614921..2616775 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgaaccaccctctcttctcccaggagcaaccccagtcctggccatggggtgtggccatgtacgccaacttccactaccaccaccactacgagaaggagcacatgtttgagaagcccctgacgcccagtgacgtggggaagctgaaccggctggtgatccccaagcagcacgccgagaggtacttccccctcggcgccggcgacgccgccgacaagggcctgatcctgtcgttcgaggacgaggccggcgcgccgtggcggttcaggtactcctactggacgagcagccagagctacgtgctcaccaagggctggagccgctacgtcaaggagaagcgcctcgacgccggcgacgtcgtgcacttcgagagggtgcgcggctccttcggcgtcggcgaccgtctcttcatcggctgcaggcgccgcggcgacgccgccgccgcgcaaacacccgcaccgccgcccgccgtgcgcgtcgccccggctgcacagaacgccggcgagcagcagccgtggagcccaatgtgttacagcacgtcgggcggcggctcataccctaccagcccagccaactcctacgcctaccgccgcgcagcagatcatgatcacggggacatgcaccatgcagacgagtctccgcgcgacacggacagcccaagcttcagtgcaggctcggcgccatcgaggcggctcaggctgttcggcgtcaacctcgactgcgggccagagccggaggcagacaccacggcagcggcaacaatgtacggctacatgcaccagcagagctcctatgctgccatgtctgcagtacccagttactggggcaattcataa</cdnaseq>

Protein Sequence

<aaseq>MAMNHPLFSQEQPQSWPWGVAMYANFHYHHHYEKEHMFEKPLTP SDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTSSQSYV LTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRRRGDAAAAQTPAPPPAVR VAPAAQNAGEQQPWSPMCYSTSGGGSYPTSPANSYAYRRAADHDHGDMHHADESPRDT DSPSFSAGSAPSRRLRLFGVNLDCGPEPEADTTAAATMYGYMHQQSSYAAMSAVPSYW GNS</aaseq>

Gene Sequence

<dnaseqindica>1128..1140#836..1028#87..720#tctctacaccgcacaccatccctgctatccctctccagcactagcagcaaaagcttttgccacaaaagagaagtaagctagcagaaatggccatgaaccaccctctcttctcccaggagcaaccccagtcctggccatggggtgtggccatgtacgccaacttccactaccaccaccactacgagaaggagcacatgtttgagaagcccctgacgcccagtgacgtggggaagctgaaccggctggtgatccccaagcagcacgccgagaggtacttccccctcggcgccggcgacgccgccgacaagggcctgatcctgtcgttcgaggacgaggccggcgcgccgtggcggttcaggtactcctactggacgagcagccagagctacgtgctcaccaagggctggagccgctacgtcaaggagaagcgcctcgacgccggcgacgtcgtgcacttcgagagggtgcgcggctccttcggcgtcggcgaccgtctcttcatcggctgcaggcgccgcggcgacgccgccgccgcgcaaacacccgcaccgccgcccgccgtgcgcgtcgccccggctgcacagaacgccggcgagcagcagccgtggagcccaatgtgttacagcacgtcgggcggcggctcataccctaccagcccagccaactcctacgcctaccgccgcgcagcagatcatgatcacggggacatgcaccatgcaggtaaagaaacgaagacgaagcaactgatgatcataaacaaaattaacatgaacagcataacatttcatacctcgagctttgcttgctcataccatttctgatgaccaaactgtagacgagtctccgcgcgacacggacagcccaagcttcagtgcaggctcggcgccatcgaggcggctcaggctgttcggcgtcaacctcgactgcgggccagagccggaggcagacaccacggcagcggcaacaatgtacggctacatgcaccagcagagctcctatgctgccatgtctgcagtacccagttactggttagtgttaacttcaaacaccactaaattgaagtgattacttagctataagcatcaagaacatttctctaatccatgaactacaacttaacatgacaggggcaattcataagaagattgactatgagatctgatctgaggccatgcctgcatgatcataattcataagtcctagcaagcaacagtggaagaactagttgctactgctctgcattcagtgacaggtttaaattgtgacttgtggaaggacaaggaaggaagtgggggggaactcccttgtttcccgggcaaatgcatattccttccatccccatagtgccttttttctaggttattttcttcttcatcttggcttccagaaaccctacttactgtatgggcccctggcagcagacatggatggggaggtttcaggaaacatcaagttgaaaaggagaggggaattgaagagacaggcagagagctgtatgtatgtcagtatgtgtcatctgtctgtatagtgggtccaagaacaaaccctgaagctgatgtattcactcctgcctcctcaggaaacataactttatccccatttcacctcttctactgtgcttgacctgatgcaatcaattgttgatggaccagatgcaattatgcaatgcttccatttgttgcaatccaataggttcaccgattacactgtgtaagaaattaaggagtgcatgtgcaatttattccaactttttagaaatgacttacatggtaatttgtctgaataaatcactatgatgttaatagtatgactaaagaaaactcccgcaaacgacaagcagtaaagaaattacgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0156000, RefSeq:Os11g0156000