BGIOSGA028871

From RiceWiki
Revision as of 17:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA028871

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028871, complete gene.

LocusTag

OsI_29654

Ensembl Transcript ID

BGIOSGA028871-TA

Ensembl Protein ID

BGIOSGA028871-PA

Length

2445

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25588465..25590909

Sequence Coding Region

25588465..25588618,25588720..25589171,25590706..25590909

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25588465..25590909 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25588465..25590909 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCCCCCGCTCCCCTCGCGCCGCTCCGCTCCCGCGCGCACCTCCGCCTCCATTGCCGCCTCCCTCCCTCGCCCTCGCCCTCGCCATCGCCTCTCCTCTCGCGAGCTCCCTCTCGCAGATGGCCTCCGCCTCTCCGCGCCTCCGCCTCCGGTCGCGGGGGCGCTTCCGCCGCCGCCGCGCCGACGAGCTCGGCGCTCGACGCGCTCCTCTCCGCCGCGGAGCTGCTCTGCCTCGCGCCGCCCGCCATCTGCTCGGTGGTATGCGCGGCCCGCCTCGTCTTCCCGCCGCCGACGACGACGGGCGCCCCCGCGTCGGGGCTCGTGGGCGGGAGGATGTTCGTCGTGCAGTACGTGCTTCTGGTGGGCGCGGTGGCGATCGGGAGCCTGATCCGGCGGAGGCAGTGGGGGCGGCTTTGCCAGGTGGGTGGCGGCGGCGGCGGTGGCGCCGCGGCTAGGGGTGTGGATTTCGCGGGGAGGATTGGCGAGGTGGAGGAGAGCGTGAGGGGCGTGGTGGCGGCCGTCGGTGTGCTGTCGAGGACCGTCGAGAAGCTCGGCGTCAGGTTTAGGGTGTTGCGGAGGACGCTGAGGGATCCTATCAATGAGACTGCAACTTTAGCCCAAAAGAATTCTGAGGCTACTCGAGTACTAGCTGCCCAAGAAGACCTTCTTGAAAAAGAACTTGGTGAAATTCAAAAGGTTTTATATGCAATGCAGGTAATAATTATTGCCTTCTTTCTTTTTTGGTTTCTCTTCCTTCGAAGTACTTGCTGTTGGTTTCCTCATGCTTGTAAGCCTGGTTTTATTTAA</cdnaseq>

Protein Sequence

<aaseq>MPPPAPLAPLRSRAHLRLHCRLPPSPSPSPSPLLSRAPSRRWPPPLRASASGRGGASAAAAPTSSALDALLSAAELLCLAPPAICSVVCAARLVFPPPTTTGAPASGLVGGRMFVVQYVLLVGAVAIGSLIRRRQWGRLCQVGGGGGGGAAARGVDFAGRIGEVEESVRGVVAAVGVLSRTVEKLGVRFRVLRRTLRDPINETATLAQKNSEATRVLAAQEDLLEKELGEIQKVLYAMQVIIIAFFLFWFLFLRSTCCWFPHACKPGFI</aaseq>

Gene Sequence

<dnaseqindica>1..154#256..707#2242..2445#ATGCCGCCCCCCGCTCCCCTCGCGCCGCTCCGCTCCCGCGCGCACCTCCGCCTCCATTGCCGCCTCCCTCCCTCGCCCTCGCCCTCGCCATCGCCTCTCCTCTCGCGAGCTCCCTCTCGCAGATGGCCTCCGCCTCTCCGCGCCTCCGCCTCCGGTAAACGCATGCGCTGGTGGCTGCTCGCCGCGGCCGCGGTCTGCTCCCCCCCACGACCTTCTTGATTCGAGCTGAGACAGTTCGTTTTGCACATTTCGCAGGTCGCGGGGGCGCTTCCGCCGCCGCCGCGCCGACGAGCTCGGCGCTCGACGCGCTCCTCTCCGCCGCGGAGCTGCTCTGCCTCGCGCCGCCCGCCATCTGCTCGGTGGTATGCGCGGCCCGCCTCGTCTTCCCGCCGCCGACGACGACGGGCGCCCCCGCGTCGGGGCTCGTGGGCGGGAGGATGTTCGTCGTGCAGTACGTGCTTCTGGTGGGCGCGGTGGCGATCGGGAGCCTGATCCGGCGGAGGCAGTGGGGGCGGCTTTGCCAGGTGGGTGGCGGCGGCGGCGGTGGCGCCGCGGCTAGGGGTGTGGATTTCGCGGGGAGGATTGGCGAGGTGGAGGAGAGCGTGAGGGGCGTGGTGGCGGCCGTCGGTGTGCTGTCGAGGACCGTCGAGAAGCTCGGCGTCAGGTTTAGGGTGTTGCGGAGGACGCTGAGGGATCCTATCAATGAGGTGAGTATTGCTTAATCTTCCAGGATACCTACCTCGTCCTACTTAGAGAAATTTAAGAATTTAAGCTTTGCTTCACTGTTGGTTTAGTAGCAACCAATTAGAATTCGTTTAAAGAAACAACCAGTTAGAATTGAACTGTCAAAAATGGTGTTAGAAAGGGGACTTGGTAACGTGTCAGTGACATGAAATTTCTACGAGTGCGTTCCAATCGGTCATGAAAATCTTGGTGTGGCTATGGACAGTTACTTTGCCCAATGTTTGAAATTCATCCATGTTCTTGATCATTGACTGGATATCACTTAACTCTTTTGTAAGAGCTCCAAATCTGACATTTCAACACACAGTTTTATTTAGCCCAGAAAGGAAACTCTCTTCTGATATCTCTTATTAGAATCTGAACCGTCAAAAGTTATATACTTGAGAAATCTTTAGCATAACGAAATAAACAGTAGGATACCAAGTCTTGATCCAGCAAACAACTGCTGCATGGATCAAGACATAACATTAGGAGGACAATTAAAACACAGCCAGCTAAAACTGCTCAGTAGTCCTCCACAGTAACAGAAAAACAGTATTGTACTCTTGTCAGCCCTGAATCCTTGGAACTTTGAGTTGCTACTCCAACACACATCTGAAACTTCAGATACCACTTGCTCGACAAGCTTGGTCCTCAGCACTAGAGATTCTATCATACTCCAGCATCTGTGGTACTATCTAGAAATTCAACTAATTAATGATAAAATGATACATTTTATATCTGAAACATGCAGCTTTTTGTGCCTACTAAATTGTCCAGAAGCAAGTGCACCTAAAAGGGTTGTCATCTTTCCCCTAAGTCATCTTAACCAGCTATCTAAACAGCCTAGGAGAACTAAAAGGTTTATTACTGAAAACAAATGCTTGCATAGTTGCATTTCAGAAATATCTAGTAAGCTTGTCAACTGAAAAACAGGTGATAACTACTCTTATCAATCCTAAAAAACTGTCATTTCTCTTCTTTTGGACCTCTCCCAATCTCATTGTCTTTATTACTGAAAACAAATGTTTGCATTGTTGCATTTCAGAACTATCTAGTAAGCTTGTCAACTGAAAAACAGGTGATAACTACTCTCATCAATCCTAAAAAACTGTCATTTCTCTTCTTTTAGACCTCTTCCAATCTCATTATCTTTAGTCAGTACGCTCTTTTTGAGCACCATTCAAGCAAAGACATGAATTTCAGAGAACGGACCCCATTCAACTTCCACATAAATTTCGGAGGAAACAAAGCACCCTACCTTTTTAAAAGCTGCAAATCATAGTGCAATGGGCATCGGAACTTTGGAAGACAAGGCCAACCTATACTACTCCTCCTAAAGTGCCAGTATATCATTGCATTCATGCTGTAGTTCTTCCTACAATCACAACATATCGTCCATACTGCCATCCTGAATGCATCCTCCATTCACAACTTCAGGAACCTTAATGTTTTTTCTGCAAGTGAATATTAAGCCTTGCACTTTTGATATAAGTTTACAGTGTTCTGTTTTTGCAGACTGCAACTTTAGCCCAAAAGAATTCTGAGGCTACTCGAGTACTAGCTGCCCAAGAAGACCTTCTTGAAAAAGAACTTGGTGAAATTCAAAAGGTTTTATATGCAATGCAGGTAATAATTATTGCCTTCTTTCTTTTTTGGTTTCTCTTCCTTCGAAGTACTTGCTGTTGGTTTCCTCATGCTTGTAAGCCTGGTTTTATTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028871