Os11g0172700

From RiceWiki
Revision as of 21:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0172700

Description

Protein kinase-like domain containing protein

Version

NM_001072401.1 GI:115484414 GeneID:4349905

Length

3069 bp

Definition

Oryza sativa Japonica Group Os11g0172700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3564302..3567370

Sequence Coding Region

3564302..3566916,3566974..3567370

Expression

GEO Profiles:Os11g0172700

Genome Context

<gbrowseImage1> name=NC_008404:3564302..3567370 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3564302..3567370 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcaattcattatatgagaacgggacagatcgactctcactgcttgaattcaaaaaggcaatcagtatggatccacagcaagccctgatgtcctggaatgacagcaattacttttgcagttgggaaggtgtcttgtgcagggttaaaactccacatcgtgtcatttctctaaaccttacaaatcgaggtttagttgggcaaatatctcctgcacttggcaacatgacattcctgaaatttctctccctatccaccaattcattcacaggagagatccatttgtcccttggtcatctgcatcgtcttgaaaccctcgacttgagcaacaacacactacaaggagacatacctgactttacaaattgttccaacctcaagtctctttggctcagtcgcaaccacttagttggacaattcaacagtaatttctcccctcggcttcaagatttgattcttgcatctaataatattactgggaccatcccttcctctcttgccaatatcacatcgctacaacggcttagcatcatggataacaatattaatgggaacatcccacatgagtttgctgggtttcccatactacagatcctctatgctgatgggaataagttggcaggtaggtttccacgagccatcttgaacatttttactattgtgggtcttgcttttagttctaattatctaaatggagaaataccgtccaatctctttgattctctgcctgaaatgcaatggtttgaagtagactataacaacttctttcaaggaggtatcccaagttctttggcaaatgcttccaagctgaaggtttttgatatatcgaggaataacttcactggggttataccttgctctattggaaaacttaccaaagtttattggctaaatcttgaaaaaaatcaactccatgcacgcaacaagcaagactgggagttcatgagctgcttagcgaactgcaccggcttgacagatttctcagtatctgataactgtctagaaggccatgtaccaagttcattaggtaacctttctgttcagcttcaacaattccttttgggaggaaatcaattatcaggggttttcccttctggtttccaataccttcgcaacttgattagcatatcaatcgatagcaataatttttcaggagtccttccagaatggctcggcagtctacaaaatttgcaattaataggcttatataacaattactttacagggattataccttcatccctttcaaatttatctcaattaggatatctctatctacagtcaaatcagttttatgggcatctaccaccaagcttgggaaatcacaaaatgcttcaagaattgactattggatataaaaatattcagggtatgataccaaaggagatattcaaaattccatcattgcttcaaattgatttatctttcaacaacctagatggaagtatcccaaaagaagtaggtgatgccaagcaactcatgtatttgaggctttcgtctaataagctatctggggatattcctaactctttaggtaattctgaaagcatggaaataataatgttggatcggaatatatttagtggaagcatccccacttcattagacaacatactcagcctaaaagttctgaacttgtctcagaacaacttgtcaggatctataccaccatctcttggcaacctccaatttcttgagaagctagatctttcattcaaccatcttaaaggtgaggtcccagtaaaaggaatattcaagaatgcaagtgccattcgaattgatggtaacgaggccctttgtggtggagtgccagagctacatttacatgcacgctctatcataccttttgattcaactaagcacaagcaatctattgtactaaaaatcgtcatcccattagctagcatgttgtcacttgctatgatcatatctatcttgttacttctgaacagaaaacagaagagaaaatctgtagatttaccctcatttggtaggaaatttgtcagagtttcttacaatgatcttgccaaagcaacagaggggttttcaacatcacatttaattggaagaggaaggtatagttctgtgtatcaagggaaatttacggacgaaaaggtggttgcagtgaaagtgttcaacttagagacaatgggagcacaaaagagcttcatcatagaatgcaatgcactaagaaaattgcgacaccgcaatatagttcctatcctaactgcatgtgcgagcactagttccaatggaaatgattttaaagctctattgtatgaattcatgccacaaggggacttgaataaattacttcattcgaccggagctgaagaattcaacagggaaaatcacggtaaccggatcacacttgctcaaagattaagcatcattgtggatgtagctgatgcaattgagtacctccaccataacaaacaagaaactattgtccattgtgatctgaagcctagcaacattcttccggatgacgatatgatagctcatgttggggactttggccttgcaaggttcaaaattgacttcatgggatccaatgactccaactcaatttactcaactgcaataaagggaaccatttggatatgttgccccagcatagtatcatttcgagtaaaccgttcccatccatggcggtccatagagtatgctgcaggtgctgaagtgtcgacctatggagatgtctttagctttggagttgttctactagaaatatttttacgaaagaaaccaaccgacgatatgttcaaggatggcctcgacattgtcaagtttgtcgaggtgaactttccagataggttaccgcagattgttgacccagaattactacaagaaacacatgtgggcacaaaagaaagagtcttgtgttgtttaaattcagtactaaacattggactcttctgcacaaagacatccccatatgagcgcatggacatgcgagaagtggctgcaaggcttagtaaaatcaaagaggtgtttctcagtggcaactaa</cdnaseq>

Protein Sequence

<aaseq>MCNSLYENGTDRLSLLEFKKAISMDPQQALMSWNDSNYFCSWEG VLCRVKTPHRVISLNLTNRGLVGQISPALGNMTFLKFLSLSTNSFTGEIHLSLGHLHR LETLDLSNNTLQGDIPDFTNCSNLKSLWLSRNHLVGQFNSNFSPRLQDLILASNNITG TIPSSLANITSLQRLSIMDNNINGNIPHEFAGFPILQILYADGNKLAGRFPRAILNIF TIVGLAFSSNYLNGEIPSNLFDSLPEMQWFEVDYNNFFQGGIPSSLANASKLKVFDIS RNNFTGVIPCSIGKLTKVYWLNLEKNQLHARNKQDWEFMSCLANCTGLTDFSVSDNCL EGHVPSSLGNLSVQLQQFLLGGNQLSGVFPSGFQYLRNLISISIDSNNFSGVLPEWLG SLQNLQLIGLYNNYFTGIIPSSLSNLSQLGYLYLQSNQFYGHLPPSLGNHKMLQELTI GYKNIQGMIPKEIFKIPSLLQIDLSFNNLDGSIPKEVGDAKQLMYLRLSSNKLSGDIP NSLGNSESMEIIMLDRNIFSGSIPTSLDNILSLKVLNLSQNNLSGSIPPSLGNLQFLE KLDLSFNHLKGEVPVKGIFKNASAIRIDGNEALCGGVPELHLHARSIIPFDSTKHKQS IVLKIVIPLASMLSLAMIISILLLLNRKQKRKSVDLPSFGRKFVRVSYNDLAKATEGF STSHLIGRGRYSSVYQGKFTDEKVVAVKVFNLETMGAQKSFIIECNALRKLRHRNIVP ILTACASTSSNGNDFKALLYEFMPQGDLNKLLHSTGAEEFNRENHGNRITLAQRLSII VDVADAIEYLHHNKQETIVHCDLKPSNILPDDDMIAHVGDFGLARFKIDFMGSNDSNS IYSTAIKGTIWICCPSIVSFRVNRSHPWRSIEYAAGAEVSTYGDVFSFGVVLLEIFLR KKPTDDMFKDGLDIVKFVEVNFPDRLPQIVDPELLQETHVGTKERVLCCLNSVLNIGL FCTKTSPYERMDMREVAARLSKIKEVFLSGN</aaseq>

Gene Sequence

<dnaseqindica>1..2615#2673..3069#atgtgcaattcattatatgagaacgggacagatcgactctcactgcttgaattcaaaaaggcaatcagtatggatccacagcaagccctgatgtcctggaatgacagcaattacttttgcagttgggaaggtgtcttgtgcagggttaaaactccacatcgtgtcatttctctaaaccttacaaatcgaggtttagttgggcaaatatctcctgcacttggcaacatgacattcctgaaatttctctccctatccaccaattcattcacaggagagatccatttgtcccttggtcatctgcatcgtcttgaaaccctcgacttgagcaacaacacactacaaggagacatacctgactttacaaattgttccaacctcaagtctctttggctcagtcgcaaccacttagttggacaattcaacagtaatttctcccctcggcttcaagatttgattcttgcatctaataatattactgggaccatcccttcctctcttgccaatatcacatcgctacaacggcttagcatcatggataacaatattaatgggaacatcccacatgagtttgctgggtttcccatactacagatcctctatgctgatgggaataagttggcaggtaggtttccacgagccatcttgaacatttttactattgtgggtcttgcttttagttctaattatctaaatggagaaataccgtccaatctctttgattctctgcctgaaatgcaatggtttgaagtagactataacaacttctttcaaggaggtatcccaagttctttggcaaatgcttccaagctgaaggtttttgatatatcgaggaataacttcactggggttataccttgctctattggaaaacttaccaaagtttattggctaaatcttgaaaaaaatcaactccatgcacgcaacaagcaagactgggagttcatgagctgcttagcgaactgcaccggcttgacagatttctcagtatctgataactgtctagaaggccatgtaccaagttcattaggtaacctttctgttcagcttcaacaattccttttgggaggaaatcaattatcaggggttttcccttctggtttccaataccttcgcaacttgattagcatatcaatcgatagcaataatttttcaggagtccttccagaatggctcggcagtctacaaaatttgcaattaataggcttatataacaattactttacagggattataccttcatccctttcaaatttatctcaattaggatatctctatctacagtcaaatcagttttatgggcatctaccaccaagcttgggaaatcacaaaatgcttcaagaattgactattggatataaaaatattcagggtatgataccaaaggagatattcaaaattccatcattgcttcaaattgatttatctttcaacaacctagatggaagtatcccaaaagaagtaggtgatgccaagcaactcatgtatttgaggctttcgtctaataagctatctggggatattcctaactctttaggtaattctgaaagcatggaaataataatgttggatcggaatatatttagtggaagcatccccacttcattagacaacatactcagcctaaaagttctgaacttgtctcagaacaacttgtcaggatctataccaccatctcttggcaacctccaatttcttgagaagctagatctttcattcaaccatcttaaaggtgaggtcccagtaaaaggaatattcaagaatgcaagtgccattcgaattgatggtaacgaggccctttgtggtggagtgccagagctacatttacatgcacgctctatcataccttttgattcaactaagcacaagcaatctattgtactaaaaatcgtcatcccattagctagcatgttgtcacttgctatgatcatatctatcttgttacttctgaacagaaaacagaagagaaaatctgtagatttaccctcatttggtaggaaatttgtcagagtttcttacaatgatcttgccaaagcaacagaggggttttcaacatcacatttaattggaagaggaaggtatagttctgtgtatcaagggaaatttacggacgaaaaggtggttgcagtgaaagtgttcaacttagagacaatgggagcacaaaagagcttcatcatagaatgcaatgcactaagaaaattgcgacaccgcaatatagttcctatcctaactgcatgtgcgagcactagttccaatggaaatgattttaaagctctattgtatgaattcatgccacaaggggacttgaataaattacttcattcgaccggagctgaagaattcaacagggaaaatcacggtaaccggatcacacttgctcaaagattaagcatcattgtggatgtagctgatgcaattgagtacctccaccataacaaacaagaaactattgtccattgtgatctgaagcctagcaacattcttccggatgacgatatgatagctcatgttggggactttggccttgcaaggttcaaaattgacttcatgggatccaatgactccaactcaatttactcaactgcaataaagggaaccatttggatatgttgccccaggtaatgctcatttccatattgtgtttttgtttccctctaaattgtgaattgtttcagcatagtatcatttcgagtaaaccgttcccatccatggcggtccatagagtatgctgcaggtgctgaagtgtcgacctatggagatgtctttagctttggagttgttctactagaaatatttttacgaaagaaaccaaccgacgatatgttcaaggatggcctcgacattgtcaagtttgtcgaggtgaactttccagataggttaccgcagattgttgacccagaattactacaagaaacacatgtgggcacaaaagaaagagtcttgtgttgtttaaattcagtactaaacattggactcttctgcacaaagacatccccatatgagcgcatggacatgcgagaagtggctgcaaggcttagtaaaatcaaagaggtgtttctcagtggcaactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0172700, RefSeq:Os11g0172700