BGIOSGA035459

From RiceWiki
Revision as of 18:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA035459

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035459, complete gene.

LocusTag

OsI_36518

Ensembl Transcript ID

BGIOSGA035459-TA

Ensembl Protein ID

BGIOSGA035459-PA

Length

2223

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17901088..17903310

Sequence Coding Region

17901088..17903310

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17901088..17903310 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17901088..17903310 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATCCCTGCTCAGCCAATTTTTTCCTGATCAATCTTCTCCTCATTGGAGGAGCTGCCACCCTGTCCATGGCAACTGATGCGCTGGTGCCATGGGAGCCAACAACCGGCTCCGGTGCCGCTGCCGCTGCGTCCTGTTTGCCATGGGAGCGGGAGGCCCTGCTGGCCTTCAAGCGTGGCATCACCGGCGACCCCGTAGGCCGCCTTGCCTCGTGGAAGAAAGAAGACCATGCAGACTGCTGCCGGTGGAGGGGCGTCCGGTGCAGCAATCTCACCGGCCATGTCCTCGGGCTCCACCTTCAGAACGATAAAGTTGCTGTATGGGATATGTATATAGAATTCTATTCTGATTTTGATGCGACAGCATTGGCCGGCCAGATAACTACCCCTCTACTCGCTCTCGAGCATCTAGAGCACCTTGATCTCAGCAACAACAACCTCACGGGACCAACCGGCCGATTACCAGAGTTCGTGGGCTCTCTCAAGAACCTGAGATATCTCAACTTGTCTGGAATGCCATTCATGGGTATGGTGCCTCGACAACTCGGTAATCTTTCGAAGCTGCAGTGTCTCGATCTCTCCAATGGAAAAGGTATGCACTCAACAGATATATCATGGCTACCACATCTACTATGGCTACGGTACCTCGACTTATCACGCGTGAACCTCACCACAATATATGATTCGCCTCATGTCATTAACATGAATCGCAATCTAAGGGCACTTCACCTTTCTGATTGCTCCCTTTCGAGTGCAAGTCAATCACTCTCGCAATTAAACCTCAAACGGCTTGAGAAGCTCGATCTCTCTGAGAACAATTTTAACCACTCTTTGGAATCTTGTTGGTTTTGGAACTTAACAAGCCTCAAATACCTCGACCTTAGTGACAACATGTTGTACGGTGAGGTTCCAATTGCACTAGGAGACATGACGTCTCTCCAAGTCTTTGAATTATTAAATTATGAAGGCGCACCCTGTACTATGGAGCCAAACTTGCTACGAAACCTATGCAATTTGGAAATCTTGGACATTCGGCAATCCCTATCTTATGGCAATGTGACAGAGATGCTCGACAATTTGATGTATTGCTCAAACAACAAACTGCGGGAAGTAATTTTGGGCCAAAACAATCTCACTGGAACTCTACCAACTGGCTTGGGCAAATTTACTAGTTTACACACTCTTCTCCTCTATGACAACCAACTTACTGGGTCTGTACCCTATGATATTGGTTTGATGATTAGTTTGACTGACCTTGACCTAAGTTCCAATAACCTGACAGGTGAAATTACAGAGAAGCACTTCGCTGGTCTAAAGAGTTTAAAAAACATAGACTTGTCTTATAATCAGGACTTGAAAATTGTGCTAGGTCCTGAATGGTTACCTCCATTTAGACTAGATGTGGCAAATTTTGCATTATGTCAGATAGGTCCTGCCTTTCCTTCATGGCTTCAACGGTTGGACGAAGTTGGCTGGCTTGATGTTTCGCACACAGGTATAACCGGTCAATTTCCACATTGGTTTTCTACAGTATTGTCAAAGCTAATTATCTTACGTATGTCCAACAACCAAATCAGTGGTTGCTTGCCAGCAAACATGGAAATCATGTCCGTGCGACTACTCGATCTATCTTCAAACCAAATAACTGGTGACATACCAACGTTGCCACCAAACCTCAGTAGTTTGGACATCTCGAATAACATGCTATCAGGGCGTTTGGCATCAAAAAACTTTGGAGCTCCACAACTAAATAATCTACGTCTATCCTCCAACAATATTAAAGGTCCGATTCCTGGTTTTGTCTGCGAGTTGCGGTACTTGGAAGACTTGGATTTATCCAACAATCTTTTGGAGGGAGAATTTCCTCAATGCTCTGGGAGAAAACTGAAATATATTGATTTAAGTAACAATTCCTTATCCGGCAGGTTCTTGCCTTCTCTGCGGGGCAACAAGCAGATACAGTTCCTAGATCTATCATCGAATAAGTTCAATGGAACATTGCCGAGTTGGATTGGAGACCTCCAGGAATTACAATTTCTAGCACTAAGCAACAATACGTTCTCTGGTCATATTCCAACCAGTATTGGTAATCTTGGAAATCTTTATCAGCTAAAACTAAGCAAAAATATGTTCTCCGGTCATATTCCAACCAGTATTGGTAACCTTAGAAATCTTTATCAGCTAAAACTAGAAAGCAATAATATATCAGGCGTCTTGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MHPCSANFFLINLLLIGGAATLSMATDALVPWEPTTGSGAAAAASCLPWEREALLAFKRGITGDPVGRLASWKKEDHADCCRWRGVRCSNLTGHVLGLHLQNDKVAVWDMYIEFYSDFDATALAGQITTPLLALEHLEHLDLSNNNLTGPTGRLPEFVGSLKNLRYLNLSGMPFMGMVPRQLGNLSKLQCLDLSNGKGMHSTDISWLPHLLWLRYLDLSRVNLTTIYDSPHVINMNRNLRALHLSDCSLSSASQSLSQLNLKRLEKLDLSENNFNHSLESCWFWNLTSLKYLDLSDNMLYGEVPIALGDMTSLQVFELLNYEGAPCTMEPNLLRNLCNLEILDIRQSLSYGNVTEMLDNLMYCSNNKLREVILGQNNLTGTLPTGLGKFTSLHTLLLYDNQLTGSVPYDIGLMISLTDLDLSSNNLTGEITEKHFAGLKSLKNIDLSYNQDLKIVLGPEWLPPFRLDVANFALCQIGPAFPSWLQRLDEVGWLDVSHTGITGQFPHWFSTVLSKLIILRMSNNQISGCLPANMEIMSVRLLDLSSNQITGDIPTLPPNLSSLDISNNMLSGRLASKNFGAPQLNNLRLSSNNIKGPIPGFVCELRYLEDLDLSNNLLEGEFPQCSGRKLKYIDLSNNSLSGRFLPSLRGNKQIQFLDLSSNKFNGTLPSWIGDLQELQFLALSNNTFSGHIPTSIGNLGNLYQLKLSKNMFSGHIPTSIGNLRNLYQLKLESNNISGVLP</aaseq>

Gene Sequence

<dnaseqindica>1..2223#ATGCATCCCTGCTCAGCCAATTTTTTCCTGATCAATCTTCTCCTCATTGGAGGAGCTGCCACCCTGTCCATGGCAACTGATGCGCTGGTGCCATGGGAGCCAACAACCGGCTCCGGTGCCGCTGCCGCTGCGTCCTGTTTGCCATGGGAGCGGGAGGCCCTGCTGGCCTTCAAGCGTGGCATCACCGGCGACCCCGTAGGCCGCCTTGCCTCGTGGAAGAAAGAAGACCATGCAGACTGCTGCCGGTGGAGGGGCGTCCGGTGCAGCAATCTCACCGGCCATGTCCTCGGGCTCCACCTTCAGAACGATAAAGTTGCTGTATGGGATATGTATATAGAATTCTATTCTGATTTTGATGCGACAGCATTGGCCGGCCAGATAACTACCCCTCTACTCGCTCTCGAGCATCTAGAGCACCTTGATCTCAGCAACAACAACCTCACGGGACCAACCGGCCGATTACCAGAGTTCGTGGGCTCTCTCAAGAACCTGAGATATCTCAACTTGTCTGGAATGCCATTCATGGGTATGGTGCCTCGACAACTCGGTAATCTTTCGAAGCTGCAGTGTCTCGATCTCTCCAATGGAAAAGGTATGCACTCAACAGATATATCATGGCTACCACATCTACTATGGCTACGGTACCTCGACTTATCACGCGTGAACCTCACCACAATATATGATTCGCCTCATGTCATTAACATGAATCGCAATCTAAGGGCACTTCACCTTTCTGATTGCTCCCTTTCGAGTGCAAGTCAATCACTCTCGCAATTAAACCTCAAACGGCTTGAGAAGCTCGATCTCTCTGAGAACAATTTTAACCACTCTTTGGAATCTTGTTGGTTTTGGAACTTAACAAGCCTCAAATACCTCGACCTTAGTGACAACATGTTGTACGGTGAGGTTCCAATTGCACTAGGAGACATGACGTCTCTCCAAGTCTTTGAATTATTAAATTATGAAGGCGCACCCTGTACTATGGAGCCAAACTTGCTACGAAACCTATGCAATTTGGAAATCTTGGACATTCGGCAATCCCTATCTTATGGCAATGTGACAGAGATGCTCGACAATTTGATGTATTGCTCAAACAACAAACTGCGGGAAGTAATTTTGGGCCAAAACAATCTCACTGGAACTCTACCAACTGGCTTGGGCAAATTTACTAGTTTACACACTCTTCTCCTCTATGACAACCAACTTACTGGGTCTGTACCCTATGATATTGGTTTGATGATTAGTTTGACTGACCTTGACCTAAGTTCCAATAACCTGACAGGTGAAATTACAGAGAAGCACTTCGCTGGTCTAAAGAGTTTAAAAAACATAGACTTGTCTTATAATCAGGACTTGAAAATTGTGCTAGGTCCTGAATGGTTACCTCCATTTAGACTAGATGTGGCAAATTTTGCATTATGTCAGATAGGTCCTGCCTTTCCTTCATGGCTTCAACGGTTGGACGAAGTTGGCTGGCTTGATGTTTCGCACACAGGTATAACCGGTCAATTTCCACATTGGTTTTCTACAGTATTGTCAAAGCTAATTATCTTACGTATGTCCAACAACCAAATCAGTGGTTGCTTGCCAGCAAACATGGAAATCATGTCCGTGCGACTACTCGATCTATCTTCAAACCAAATAACTGGTGACATACCAACGTTGCCACCAAACCTCAGTAGTTTGGACATCTCGAATAACATGCTATCAGGGCGTTTGGCATCAAAAAACTTTGGAGCTCCACAACTAAATAATCTACGTCTATCCTCCAACAATATTAAAGGTCCGATTCCTGGTTTTGTCTGCGAGTTGCGGTACTTGGAAGACTTGGATTTATCCAACAATCTTTTGGAGGGAGAATTTCCTCAATGCTCTGGGAGAAAACTGAAATATATTGATTTAAGTAACAATTCCTTATCCGGCAGGTTCTTGCCTTCTCTGCGGGGCAACAAGCAGATACAGTTCCTAGATCTATCATCGAATAAGTTCAATGGAACATTGCCGAGTTGGATTGGAGACCTCCAGGAATTACAATTTCTAGCACTAAGCAACAATACGTTCTCTGGTCATATTCCAACCAGTATTGGTAATCTTGGAAATCTTTATCAGCTAAAACTAAGCAAAAATATGTTCTCCGGTCATATTCCAACCAGTATTGGTAACCTTAGAAATCTTTATCAGCTAAAACTAGAAAGCAATAATATATCAGGCGTCTTGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035459