BGIOSGA035476
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA035476 |
|---|---|
| Description |
Putative carotenoid isomerase ZEBRA2 |
| Definition |
Oryza sativa Indica Group BGIOSGA035476, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA035476-TA |
| Ensembl Protein ID |
BGIOSGA035476-PA |
| Length |
3658 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:18229741..18233398 |
| Sequence Coding Region |
18229741..18230232,18230627..18230833,18230959..18231058,18231269..18231351,18231446..18231502 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome11:18229741..18233398 source=RiceIndica11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome11:18229741..18233398 source=RiceIndica11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGCCGCTCCTCCTCCTCGCCGCCGCGCGCCCGTGCGCCCCGCTCCTCGCTCCCTCCGCCGCCGGAGCAGTAGTAGGCCGGCCGTCCACCGCCCGCCCACTGGGACGAGGGACCAGGAGTGGCGCGGGCGCGGCGGCGGCTGTGGCGGCGGAGAAGACGGTGGTGAAGGCGGCGGAGGAGGAGGAGGAGGGTGGGGGTGGGGGAGAGTACGACGCGATCGTGGTGGGGTCGGGGATCGGGGGGATGGTGGCGGCGACGCAGCTGGCGGCGAAGGGGGCGAGGGTGCTGGTGCTGGAGAAGTACGTCATCCCCGGGGGGAGCTCCGGGTACTACCGCCGCGACGGGTTCACCTTCGACGTCGGCTCCTCCGTCATGTTCGGCTTCTCCGACAAGGTGAGGACAGTGACTGAGCACAGTTGGGTGTGGATGAGAATTGGGATGGTTGCGTTGCTGCTAGTATATTCTGGGGATCTTGCGTTGGCGAATTTGGTTGGGAACTTGAATTTGATTACACAAGCACTAGAAGCAGTTGGGCATAAGATGGAAGTTATACCGGACCCTTCTACGGTCCATTTCCACCTACCTGGTGACCTCTCAGTTCTTGTGCATAGAGAGTATGACGACTTCGTCACGGAGCTGGTTAACAAATTTCCTCATGAAAAGGAAGGAATCCTGAAATTCTATGGCACATGTTGGAAGATCTTCAATTCATTAAATTCTTTGGAGCTGAAGTCCCTTGAGGAGCCTCTATATCTTTTTGGGCAATTTTTTCAAAAGCCTCTGGAATGTTTGACGCTAGCTTATTATCTGCCACAGAATGCTGGGGATATTGCTCGCAAGTTCATAAAAGATCAGCAGTTACTCTCCTTCATAGATGCTGAGTGCTTTATTGTGAGCACAGTCAATGCCTTGCAAACACCCATGATTAATGCAAGCATGGTCTTGTGCGATAGGCACTTCGGGGGAATTAACTATCCAGTTGGTGGTGTTGGTGGTATTGCTATGTCCTTGGCAGATGGCCTTGTTGACAAAGGCAGTGAAATACGCTACAAGGCTAATGTGACCAATGTAATTTTAGAAAATGGCAAAGCTGTTGGAGTCAGGTTATCAAATGGGAAGGAGTTATTTGCTAAAACAGTGATATCGAATGCTACCAGATGGGATACGTTTGGTAAACTCTTGAAAGTTGAAGAGCTTCCAGAAGAGGAGAAAAACTTCCAAAAGAATTATGTTAAAGCACCATCATTCCTTTCCATTCATATGGGTGTCAAAGCCTCAGTTTTGCCTGCTGATACTGATTGCCACCATTTTGTGCTTGAGGATGACTGGGCTAATTTGGAGAAGCCTTATGGAAGCATATTTTTAAGTATCCCTACAGTGCTGGACCCATCCTTGGCTCCCGAAGGACACCATATACTTCATATTTTTACAACTGCAGGGATAGAGGATTGGGAAGGTCTGTCTAGGAAGGATTATGAGAAGAAAAAGGAGCTTGTGGCGACAGAGATAATAAAAAGGCTTGAAAATAAGCTGTTCCCTGGTCTTCAGGATTCAATAGTCCTCAAGGAGGTAGGCTCACCAAAAACACACCGAAGATTTCTTGCGCGAAATGATGGTACTTATGGACCCATGCCACGGGGTAAACCAAAGGGGTTGCTTGCAATGCCTTTCAATACTACTTCAATAGATGGCTTGTACTGTGTTGGCGACAGCTGTTTTCCTGGGCAAGGTGTAATTGCTGTGGCATTTTCAGGGATCATGTGTGCTCATCGAGTTGCAGCTGATATTGGACTGGAACAAAGATCTCCTGTACTAGATGCCGGTCTTCTTGGGCTCCTCAGATGGTTGAGAACGCTTGCATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MPLLLLAAARPCAPLLAPSAAGAVVGRPSTARPLGRGTRSGAGAAAAVAAEKTVVKAAEEEEEGGGGGEYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSSGYYRRDGFTFDVGSSVMFGFSDKVRTVTEHSWVWMRIGMVALLLVYSGDLALANLVGNLNLITQALEAVGHKMEVIPDPSTVHFHLPGDLSVLVHREYDDFVTELVNKFPHEKEGILKFYGTCWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGDIARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAMSLADGLVDKGSEIRYKANVTNVILENGKAVGVRLSNGKELFAKTVISNATRWDTFGKLLKVEELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPADTDCHHFVLEDDWANLEKPYGSIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRKDYEKKKELVATEIIKRLENKLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTSIDGLYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGLEQRSPVLDAGLLGLLRWLRTLA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..492#887..1093#1219..1318#1529..1611#1706..1762#1840..1992#2066..2144#2329..2477#2589..2723#2831..2944#3107..3217#3307..3415#3585..3658#ATGCCGCTCCTCCTCCTCGCCGCCGCGCGCCCGTGCGCCCCGCTCCTCGCTCCCTCCGCCGCCGGAGCAGTAGTAGGCCGGCCGTCCACCGCCCGCCCACTGGGACGAGGGACCAGGAGTGGCGCGGGCGCGGCGGCGGCTGTGGCGGCGGAGAAGACGGTGGTGAAGGCGGCGGAGGAGGAGGAGGAGGGTGGGGGTGGGGGAGAGTACGACGCGATCGTGGTGGGGTCGGGGATCGGGGGGATGGTGGCGGCGACGCAGCTGGCGGCGAAGGGGGCGAGGGTGCTGGTGCTGGAGAAGTACGTCATCCCCGGGGGGAGCTCCGGGTACTACCGCCGCGACGGGTTCACCTTCGACGTCGGCTCCTCCGTCATGTTCGGCTTCTCCGACAAGGTGAGGACAGTGACTGAGCACAGTTGGGTGTGGATGAGAATTGGGATGGTTGCGTTGCTGCTAGTATATTCTGGGGATCTTGCGTTGGCGAATTTGGTTGTGAGTGAGCGATTGATTGCTGGGAGCACTATGTGAAGTGCGGTGTCGAGGACGGCGAGAATTGGGGAAGGGAAAGTTAGGATTGATTTGGTTGTTGTTGGCTAGATGATGAGAAAATTATTGCTTTTCATGTGCATTTATGCCTCGTAATGCCCTGATAGGTACTTTACCTGATTGGAGTGGAATGTCGCGTTGATGGCGAAAATCGCAGCTATAGGTGTCCAACTTAGGAATATAGGTTGGCACTTGGCAGTGGGCATGCCTGGGTGAATGGGTGTGCAATGTTGCTGTTGCTGAGAGTATTGGCATGTGTGGGTGGGACTAGTGGCCGATAATATTTGTTTGTCTCTGAGTGTTGATTTTATCGTAAATATGACTTGTTTCTGTGATCCAGGGGAACTTGAATTTGATTACACAAGCACTAGAAGCAGTTGGGCATAAGATGGAAGTTATACCGGACCCTTCTACGGTCCATTTCCACCTACCTGGTGACCTCTCAGTTCTTGTGCATAGAGAGTATGACGACTTCGTCACGGAGCTGGTTAACAAATTTCCTCATGAAAAGGAAGGAATCCTGAAATTCTATGGCACATGTTGGAAGGTACTGTGGTACCATTTTCATTCTCCACTCTTATCTACAACTACTACTTTTTTTTCTTTTTGGTATTTTGAATTCACTCTTTGCAAGCATATATCAAGTACAGTTGTTTTCTCATATATGAGCAGATCTTCAATTCATTAAATTCTTTGGAGCTGAAGTCCCTTGAGGAGCCTCTATATCTTTTTGGGCAATTTTTTCAAAAGCCTCTGGAATGTTTGACGCTAGGTATAAGAACTACATCCATATATTCCTCTACAATATTTTGTAGCTGACCCATTGTATTCCCTATGGGCAAACTACAGCTGAATCAAATGCAATCCCAAAAACCAATGAAAGGATGATTGAGAGGAGAACTTGATCAGTACATCATATTTACTGTTTAATCAGATTGGTTGACTTGATACAGTGGAACTCATGACTTTATCTCTCTTGCAGCTTATTATCTGCCACAGAATGCTGGGGATATTGCTCGCAAGTTCATAAAAGATCAGCAGTTACTCTCCTTCATAGATGCTGAGGTGTGAGATATTTGTGAGTTTACTCACTTGTTCAATTTTTCTTCGCCGACCATGCGATTTTCTGTTAACACCAGTTTATTCACTTTGTTTGTAGTGCTTTATTGTGAGCACAGTCAATGCCTTGCAAACACCCATGATTAATGCAAGCATGGTAAGTGGAATGCATGACTCTCAGAATTTTGCTTCTGATTCATTTAAATTTCTGTTATCTCAAGGGTGAAATAACAGGTCTTGTGCGATAGGCACTTCGGGGGAATTAACTATCCAGTTGGTGGTGTTGGTGGTATTGCTATGTCCTTGGCAGATGGCCTTGTTGACAAAGGCAGTGAAATACGCTACAAGGCTAATGTGACCAATGTAATTTTAGAAAATGGCAAAGCTGTAAGTTCATCTTACTTAGACTAAATATCTGGAACTTTTATCGACTTGTTAGCTGAGCATTTCATTACTATAGGTTGGAGTCAGGTTATCAAATGGGAAGGAGTTATTTGCTAAAACAGTGATATCGAATGCTACCAGATGGGATACGTTTGGTAATCCTGCTTATCTATTTTTATTTGAAAATGATGCGGCTCATTGAAATTCATTTGTTACAATATTCTTTGCTGAAAGTTTCACAACCTTTGCTCAAAATTCACAACTCAGTTTTGTTCTTGAGTTATTATTTGTTAACTACTTGTACTTGTCCATAAAAATAACAATTACTTCTACTCAAAGGTAAACTCTTGAAAGTTGAAGAGCTTCCAGAAGAGGAGAAAAACTTCCAAAAGAATTATGTTAAAGCACCATCATTCCTTTCCATTCATATGGGTGTCAAAGCCTCAGTTTTGCCTGCTGATACTGATTGCCACCATTTTGTGCTTGAGGTAGGTATGACTCCACTGTGGGTATCAGATATCGCAGGCAGTTGGTACACAATGTTAAATTGATATGAACAGTTTAATCCATAATAACTTAATTCTAATTACAATTGCCAGGATGACTGGGCTAATTTGGAGAAGCCTTATGGAAGCATATTTTTAAGTATCCCTACAGTGCTGGACCCATCCTTGGCTCCCGAAGGACACCATATACTTCATATTTTTACAACTGCAGGGATAGAGGATTGGGAAGTATGGACTGTGCTTTTGCTGTAGTCTAATTTATTTCAAATTGTGAGAAACTAAGCCTTTTGTACCAATGTACTTATTTAGTTATTTATTCCTAATATCCACCACAGGGTCTGTCTAGGAAGGATTATGAGAAGAAAAAGGAGCTTGTGGCGACAGAGATAATAAAAAGGCTTGAAAATAAGCTGTTCCCTGGTCTTCAGGATTCAATAGTCCTCAAGGAGGTATTTATAGTTCTTCCACGTCAGGATCTAAGACTGTTCTTTTCACTATGACTAATTTTTGTTTGACCTTTAAATGCTGCTATCATGCAAAAAACTGTAGTGGGGTAGTTTTGATTCTAGTGCTAATACGCTTTCGACTTGTTGAACATTTGGTGTTGTCAGGTAGGCTCACCAAAAACACACCGAAGATTTCTTGCGCGAAATGATGGTACTTATGGACCCATGCCACGGGGTAAACCAAAGGGGTTGCTTGCAATGCCTTTCAATACTACTGTAAGTTAATATGCATTGTTGACTTGATGTCCTGAAATCTTCTTGTGCTGCAATATTGTTGGACTGAAAATTTACTGCTTATTTTACAGTCAATAGATGGCTTGTACTGTGTTGGCGACAGCTGTTTTCCTGGGCAAGGTGTAATTGCTGTGGCATTTTCAGGGATCATGTGTGCTCATCGAGTTGCAGCTGATATTGGTAAGTTCAGGTTCCACTAACATCCCCCCTAAAATGAACTGAGTTTGAAGGATTGGAAGCTTTATTTATGTTAGGGACTAAGAAGTAGAGAGATTTGTCTGCTGATGAACAACATAAGCTGATATTGGCAGAAAAATGACGTTTGTTTGCTGCTTTGATCCTCATCCAGGACTGGAACAAAGATCTCCTGTACTAGATGCCGGTCTTCTTGGGCTCCTCAGATGGTTGAGAACGCTTGCATAG</dnaseqindica> |
| External Link(s) |
