BGIOSGA001305

From RiceWiki
Revision as of 18:10, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001305

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001305, complete gene.

LocusTag

OsI_02648

Ensembl Transcript ID

BGIOSGA001305-TA

Ensembl Protein ID

BGIOSGA001305-PA

Length

3912

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25723814..25727725

Sequence Coding Region

25727530..25727725,25727218..25727312,25725467..25725695,25725047..25725228,25723814..25724362

Genome Context

<gbrowseImage1> name=IndicaChromosome01:25723814..25727725 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:25723814..25727725 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCTTGGGAGGATGAACCTAGCGGTGGATCTCGGGAACCCTCCGAGCCCAGCGGCTGCACGGATCTGATCATGCCGCCGTTGCGGCCTAAATCCCCGCCGGAATTACTAGACCGGCTGCTTCTCCACGACGAGGAGGAGGAGGAGACGACAAGCTATGTTGCCTCCGCTCACCCAGCGCCCATAGAATATGGTTCAGACGACGACGCCGGTTTAACCAGGTTTGTCGATGACATGTATAGCTGCGTGGAACTGGATGATGTGGTAGACAAGGAGACGGTTTGCCAGAAGTACACTAGGGACCAAGCAAAGGAAATAAGTCGCAAGTGGCTAGCAACATACATCAGGAGGAATGCAGAACACACGGAGGCATATAAAGAGTTTGTAGCGTCGGGATATGATTATGCTCAACTTCTACGATATCCTTTGAGGCTGTTTCCCAAGACATCATATCACTGCATCAAAAAAAGCATTTACTGTGATCATCACGAATACCTGACCTTCACTACTTCTGAGACTGCATCAACTATTGGGATGAATGAGCCAAATGATATGCTCCAAATCTTCTCTTTGAAGTTATCCAGTAACGAATCATACCCCATTAGTGTCTATGGGATCTTTGCGGTACGCGATGAATTGGACAGGCTACGGAATTATGTCTTTAACCGCACAAGAGATAATCCTGTCTTGATTGAGCAGGATTCCATTACCTTACCTCTTTGTAGCCCTTGCCGAGGAATGTATATACTAAGTTATGCATTGTTCGAAGTCGATCTTTGGGTGAAGGCAGAATCAGAAGGTGGAGGATCAGATGACAAGCAATTGCTTTCTGAGTATGCTGAGATCGAGAACCGTGGCCTAAAAGATCCTATGATATATGGACGGATTCCAAGTGATCGTTGCCTGCTAGACGTAGACTGCATGTTCCTTCTCAACAGTGTTGAGGCTGTCATACAAGTCTTTACAAAGGATGACAGTGATAATCCTCATCGCGTGAGATTCACCGCCTTCAGCAGCGGCTTTGATCATGAGATCGTGTTGTACGATGACAGATTATGCAAGAAGGGGAAGTTGTTCCAGAATGTTGTCGCGGTGAAGTCTAAGGAAAAACTGGTTATTCGCTTAGAATTCGAGGGATCGACGTTTCGGTGGACTTTTCAGGATGGTGTTGTTGCAGCTGTTAGTTCTCCTGATGATTCGGTCTCGAAGCTGTTTGATGTGGTGGTTCTTTTTTCTCCAAAATCATAG</cdnaseq>

Protein Sequence

<aaseq>MASWEDEPSGGSREPSEPSGCTDLIMPPLRPKSPPELLDRLLLHDEEEEETTSYVASAHPAPIEYGSDDDAGLTRFVDDMYSCVELDDVVDKETVCQKYTRDQAKEISRKWLATYIRRNAEHTEAYKEFVASGYDYAQLLRYPLRLFPKTSYHCIKKSIYCDHHEYLTFTTSETASTIGMNEPNDMLQIFSLKLSSNESYPISVYGIFAVRDELDRLRNYVFNRTRDNPVLIEQDSITLPLCSPCRGMYILSYALFEVDLWVKAESEGGGSDDKQLLSEYAEIENRGLKDPMIYGRIPSDRCLLDVDCMFLLNSVEAVIQVFTKDDSDNPHRVRFTAFSSGFDHEIVLYDDRLCKKGKLFQNVVAVKSKEKLVIRLEFEGSTFRWTFQDGVVAAVSSPDDSVSKLFDVVVLFSPKS</aaseq>

Gene Sequence

<dnaseqindica>1..196#414..508#2031..2259#2498..2679#3364..3912#ATGGCATCTTGGGAGGATGAACCTAGCGGTGGATCTCGGGAACCCTCCGAGCCCAGCGGCTGCACGGATCTGATCATGCCGCCGTTGCGGCCTAAATCCCCGCCGGAATTACTAGACCGGCTGCTTCTCCACGACGAGGAGGAGGAGGAGACGACAAGCTATGTTGCCTCCGCTCACCCAGCGCCCATAGAATATGGTACGTACGTACGTACACTTTGGCATCTCCATATACGTACTAGTATACTCTTTTCATCCTAAAATATAAAAATTTAGGATTGAATGAAATATTTTCTAGTGCGATTTATCTGGACACTTATTCAATTTTAGGTTCTTATATTTTTAGGACGGATGAAGTATATGTTTCTTTCTCTGAATTCTTTTGCACCACAACTTGTGCATGTATGCATATGCAGGTTCAGACGACGACGCCGGTTTAACCAGGTTTGTCGATGACATGTATAGCTGCGTGGAACTGGATGATGTGGTAGACAAGGAGACGGTTTGCCAGGTAAAAATACAACATTTACTATGGGAAAGTCTTTTTGTCTCGGAAAATTTAACTATTAATTTTGCCACTATAAGAAACAGCCACTATTCAAATGCGACTTTCAAGATTGTCCTAAAAATTTTCCCACTCGATCAATCGAGAGAGAAATATCGTTAATATTTTGCCTTTTTTTTTTTTTTGCCTACGTACAATGTTATCTGATCGCTAATCGATCCTGATCGCCAAGGGATCGACCAGGATGAGTAATCGTCGATCAGCCTCGATTAATTGACCTGATCGGTACTATGTATACCAGAACCTAAATAGTATAATGGATGGTATAAAGCAATCACAGTGCTTATAATTGATGGCAGAATGATCACTTACTTGCCCTAGTACGTATAAAGCAACCAACAGTTGTAGCACACATTCAGATGTGCTCAACCCTAAGACTTGTTCTGAAAGTGATCGATAGGTGCTCGATCTGGTCGCACCTGACTGACGATTAATCAAATGATCAGATTTCTGATCAAGCTGATCGAATGAATGTCCCTAATCGGAGTCAGGGGACTGATCAGGATGATTAATCGTATGATCAGATAACACTTACTTACATGGCATGACACATAGGCATATCAGCATGGACAAGTGACGTGAAATGTCCATTCTACACTTAGCCGTCCTCTTGTGTTCCCCGTTGATCCATTTCAGACTTTCCTATTTAATGTTGGCCTGGAATCAATTAAAAAGATCAACAACCATATTCATTTCTTGCATTGCATGCAACGAGTTGAGGTGAATCCATCCTCCTCGGTACTAATTTGGGCCATGAAATAGATACAGGTTTATGAAATCAAGGAAAAGGGAGTTAAAACAGGGAGATGAAGAGTGTCAAAGCGAAGATGTTTCATGTCGATTACAACAAACATTTATCAAGAAACATAACAGAATAACCATGAATTTTCTCTCCTTCTTAAACTTTCCCGAATCCAACCTAAATAACAAAAAAAAAAAGCAGCGAAGTAACCAAAATTGGGAAAAAGTGGCAAACAGAGAGTGGTGGTTTAGAAGAGTGGCAAATAGTTAAATATCTCTTTTGTCTATGATGTCTTATTGTTTTAATTTTTGCATGTCAACCAAAAAGTTTTTTCTTAACAAAATTAACAATATCGATCAATATGTGATATATTGCTACATAAGCTTGCATGTTTAAATTTAATCAACACAAGTAAAAGAACAAAGTAAACTCTAGATAGTACGTTACTATTTACAATCATGTTTATTCTTTTTTACAATTTGTATAGGTCAACTGAAACTTGTATGTTTGTTAAGCGATATGTCACACATTAATCTATGTTCTATTTTTTTATATATTTTTATAACTATTTAGATGATATATTAGAAAAAGGGGAGGGGGGTTGAACTTAAGAGAAAAAAACCATCTCCCATTACAGTTATGTTAATCCAAACAGGAGCTACAAATTCATACATGCAAATACATACGGTTGATACCTTTTTTAACTTAATTAACTCTTCAGGTCAGAAGTACACTAGGGACCAAGCAAAGGAAATAAGTCGCAAGTGGCTAGCAACATACATCAGGAGGAATGCAGAACACACGGAGGCATATAAAGAGTTTGTAGCGTCGGGATATGATTATGCTCAACTTCTACGATATCCTTTGAGGCTGTTTCCCAAGACATCATATCACTGCATCAAAAAAAGCATTTACTGTGATCATCACGAATACCTGACCTTCACTACTTCTGAGAGTAAGTGTTGGTCAATTATATTCCAACTGTTTAGAGGATTCATTGATAATTATTTGATCAATTTATCTTCTTTGCTACCAATATGTACTTCCTTCGTTTTACAATGTAAGACTTTCTAGCGTTGTCCACATACATATAGATGTTAGAAAGTCTTATATTATGTAACGGAGAGAGTACACTCTTGCAACTTTTCTTTTCTTATACGTGCTATTAATCTCTTGAGAGTACATATTTGCAGCTGCATCAACTATTGGGATGAATGAGCCAAATGATATGCTCCAAATCTTCTCTTTGAAGTTATCCAGTAACGAATCATACCCCATTAGTGTCTATGGGATCTTTGCGGTACGCGATGAATTGGACAGGCTACGGAATTATGTCTTTAACCGCACAAGAGATAATCCTGTCTTGATTGAGCAGGTAGGGTTCTATTTTCAGGAACTTAATTCTATACTTCGGCTAAAATAGATTCTCAAAAGTATGACATAAATAAACACTAATTAGCCTTCTTTCTCGCTTGGATATATTGAACCCAATATGCTGTCAAATACTTATCATTTTTTATGGTTCTAAATGAAAATAAGGTTCTATGTTTGCAGTTGCATACTAGCATTTTAGGATATTAGTTTGTTGCTTTCAATAGTATTTTTTTTTGTTCACGTATGTGAGTGTATCACTTGCTTTGGCTGTCACTGTAATGTTCTGCTCTCATTATTTTTATTAGATGACCATTTCCAATCCTTAGTCCATACAAGGTATTGTGAGGTATAGATATTCCATTGTTAATTAATTACCTCTGGCACTAGAGATACACCTATACGTCTCAATATCATCCAAAGTGCTAGATAAAACTATTAATTAATTGTTATATATGAGGTCCATTTGTGTATCCAATTCTGCGATCTAAGACAATGCTAATGAGATTAAAAAAAATCCAATATTGTGTAGACCGTACCATGAATTCATGAGTGTACGTGTCCTATGGAATTCGTTCGTCGTTACACTCAGAAATATGTATTTATACGTTTCAATTTTATTCAATGTATTTCAAAATGGCTCAAGCTCTCTAATTAAATTCTTACAAGTTTATAAATATAACTGCAGGATTCCATTACCTTACCTCTTTGTAGCCCTTGCCGAGGAATGTATATACTAAGTTATGCATTGTTCGAAGTCGATCTTTGGGTGAAGGCAGAATCAGAAGGTGGAGGATCAGATGACAAGCAATTGCTTTCTGAGTATGCTGAGATCGAGAACCGTGGCCTAAAAGATCCTATGATATATGGACGGATTCCAAGTGATCGTTGCCTGCTAGACGTAGACTGCATGTTCCTTCTCAACAGTGTTGAGGCTGTCATACAAGTCTTTACAAAGGATGACAGTGATAATCCTCATCGCGTGAGATTCACCGCCTTCAGCAGCGGCTTTGATCATGAGATCGTGTTGTACGATGACAGATTATGCAAGAAGGGGAAGTTGTTCCAGAATGTTGTCGCGGTGAAGTCTAAGGAAAAACTGGTTATTCGCTTAGAATTCGAGGGATCGACGTTTCGGTGGACTTTTCAGGATGGTGTTGTTGCAGCTGTTAGTTCTCCTGATGATTCGGTCTCGAAGCTGTTTGATGTGGTGGTTCTTTTTTCTCCAAAATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001305