BGIOSGA001826

From RiceWiki
Revision as of 18:13, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001826

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001826, complete gene.

LocusTag

OSJNBB0004A06.18

Ensembl Transcript ID

BGIOSGA001826-TA

Ensembl Protein ID

BGIOSGA001826-PA

Length

1428

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12019597..12021024

Sequence Coding Region

12019597..12021024

Genome Context

<gbrowseImage1> name=IndicaChromosome01:12019597..12021024 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:12019597..12021024 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTTGTCATTTCTGCATTAGCGAGTGACATCATTAGCCGATTCATGTCATTCCTTATCAGTAAGTATGGAAACAACTCATGTTTGAAGAACAAACTTGAGAGACTGCAACATCTTCTTCTAAGGGTTCATATGGTTGTTGAGGAGGCAGAAGGACGATACATTACAAATGCAGGGATGCTGTTGAAACTCAAGATGCTTACAGAGGCTATGTATAAAGGCTACCATGTCTTTGACACTTATGGTCCCTTAGAGCTTATTAAAGAAGCAGGGGAGGTGAGTGACTCATATGCCCTGGATTTCCATTATGTAAGACGATTTCATCTATCTGGTGGCACAATTGTTAGGAGGGAGGTGAAGAGTTCATTAGAAAATTTAGAAACCGTTCTTGATAACCTAAAGGAATTTGTTTCACTCCTAAATGGATGCGAACGGATATTCCGCAATCCATATAGTACCTATCTTTACATTGACAACTTCATGTTTGGACGTCAAGTCGAAAGACAACAAGTCATGAGCATATTGATGCTAGATGATCATCCTAAGATCCCAGCTGTGCTGCCTATAATTGGTGGTTGTAGAGTAGGTAAGAAGACACTAGTTTGGAGTGTTTGTAGTGATGAGAGGATCCGCTCTCACTTTTCTGCCATTCTGCATTTCGGTGGCGATGATATTAAGAAATTTGATGAACGCAAGGTTATGCCTCTCAAGACATTAATTACTGTTGAATTTATTTCAGACATAAGTGACTGTGAATGGTTGAATTTTTATTCTTTAGTAGCCTCCTCTGGTAACGGAAGCAAGGTTATAATCATAAGTAGGCTTGAGAAACTAGCAAGGTTTGGGACTGTAAACCCCATTGAACTTAGGAACTTTTCGCATGAGGAGTACAGCTACCTTTTCAACGTTCTCGCATTTGGAAGCTCGAACCCATTGGATCACCCCCGGTTAGCGATAATAGGGAAGGAGATAGCAAGAACATTGCAGGGGTCACTTGTCGCCATAAACATATATGCTAATGTTCTGAGGAATAATTTCAGTGTTCCATTTTGGATCCGTGTGCTGAACCTATACAGAGGGATGATGGAGAGCAACTTGTCCTTGTATGGTGAACACCCTAAATCTCTACTTCAGAAAGATGGAACTATTATCGATATAACTGCATTTTGCCCGTCATTGGCTACAAACTCATTTCGAATCACACTGCTAACTGGTGAAAAATTCAAGTATGATAACAAAAGGGAATTACCCGTCATGGGATTCGGCGATATAATAGCGGGCTCCGTAACCATGCCAATGAAGTTTCAGTTAGTTTGGGAATCACGGTTAGCCTCTTATACTGTTATTTCTGCAACTTGTGGTGCAGAGGAGCTTTTGTCAACAACCTCAACAAGGAAGAAACGGAAGATTGTGTGTACTTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MDVVISALASDIISRFMSFLISKYGNNSCLKNKLERLQHLLLRVHMVVEEAEGRYITNAGMLLKLKMLTEAMYKGYHVFDTYGPLELIKEAGEVSDSYALDFHYVRRFHLSGGTIVRREVKSSLENLETVLDNLKEFVSLLNGCERIFRNPYSTYLYIDNFMFGRQVERQQVMSILMLDDHPKIPAVLPIIGGCRVGKKTLVWSVCSDERIRSHFSAILHFGGDDIKKFDERKVMPLKTLITVEFISDISDCEWLNFYSLVASSGNGSKVIIISRLEKLARFGTVNPIELRNFSHEEYSYLFNVLAFGSSNPLDHPRLAIIGKEIARTLQGSLVAINIYANVLRNNFSVPFWIRVLNLYRGMMESNLSLYGEHPKSLLQKDGTIIDITAFCPSLATNSFRITLLTGEKFKYDNKRELPVMGFGDIIAGSVTMPMKFQLVWESRLASYTVISATCGAEELLSTTSTRKKRKIVCTS</aaseq>

Gene Sequence

<dnaseqindica>1..1428#ATGGATGTTGTCATTTCTGCATTAGCGAGTGACATCATTAGCCGATTCATGTCATTCCTTATCAGTAAGTATGGAAACAACTCATGTTTGAAGAACAAACTTGAGAGACTGCAACATCTTCTTCTAAGGGTTCATATGGTTGTTGAGGAGGCAGAAGGACGATACATTACAAATGCAGGGATGCTGTTGAAACTCAAGATGCTTACAGAGGCTATGTATAAAGGCTACCATGTCTTTGACACTTATGGTCCCTTAGAGCTTATTAAAGAAGCAGGGGAGGTGAGTGACTCATATGCCCTGGATTTCCATTATGTAAGACGATTTCATCTATCTGGTGGCACAATTGTTAGGAGGGAGGTGAAGAGTTCATTAGAAAATTTAGAAACCGTTCTTGATAACCTAAAGGAATTTGTTTCACTCCTAAATGGATGCGAACGGATATTCCGCAATCCATATAGTACCTATCTTTACATTGACAACTTCATGTTTGGACGTCAAGTCGAAAGACAACAAGTCATGAGCATATTGATGCTAGATGATCATCCTAAGATCCCAGCTGTGCTGCCTATAATTGGTGGTTGTAGAGTAGGTAAGAAGACACTAGTTTGGAGTGTTTGTAGTGATGAGAGGATCCGCTCTCACTTTTCTGCCATTCTGCATTTCGGTGGCGATGATATTAAGAAATTTGATGAACGCAAGGTTATGCCTCTCAAGACATTAATTACTGTTGAATTTATTTCAGACATAAGTGACTGTGAATGGTTGAATTTTTATTCTTTAGTAGCCTCCTCTGGTAACGGAAGCAAGGTTATAATCATAAGTAGGCTTGAGAAACTAGCAAGGTTTGGGACTGTAAACCCCATTGAACTTAGGAACTTTTCGCATGAGGAGTACAGCTACCTTTTCAACGTTCTCGCATTTGGAAGCTCGAACCCATTGGATCACCCCCGGTTAGCGATAATAGGGAAGGAGATAGCAAGAACATTGCAGGGGTCACTTGTCGCCATAAACATATATGCTAATGTTCTGAGGAATAATTTCAGTGTTCCATTTTGGATCCGTGTGCTGAACCTATACAGAGGGATGATGGAGAGCAACTTGTCCTTGTATGGTGAACACCCTAAATCTCTACTTCAGAAAGATGGAACTATTATCGATATAACTGCATTTTGCCCGTCATTGGCTACAAACTCATTTCGAATCACACTGCTAACTGGTGAAAAATTCAAGTATGATAACAAAAGGGAATTACCCGTCATGGGATTCGGCGATATAATAGCGGGCTCCGTAACCATGCCAATGAAGTTTCAGTTAGTTTGGGAATCACGGTTAGCCTCTTATACTGTTATTTCTGCAACTTGTGGTGCAGAGGAGCTTTTGTCAACAACCTCAACAAGGAAGAAACGGAAGATTGTGTGTACTTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001826