BGIOSGA002953

From RiceWiki
Revision as of 18:20, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002953

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002953, complete gene.

LocusTag

B1015E06.9

Ensembl Transcript ID

BGIOSGA002953-TA

Ensembl Protein ID

BGIOSGA002953-PA

Length

2910

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5841448..5844357

Sequence Coding Region

5841448..5841989,5842632..5842743,5844028..5844357

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5841448..5844357 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5841448..5844357 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGCATCCAGGCCGGATCACCGGCGGCACCACCCGCCGTTTCTCCGGGACCTCTCGTCGCCGATCTCCTCGGCCGTGCGGCTGCCCCCGGCCTCCCTCCGCCGCGAGACGCAAGGTTCCACCACCCCGCCGCCGCCGCCGCCGCCGCTGCTGTTCCTCGACGACCTCTCCCACCACTCCCCCTCGCCGAGGCCCGCCACCCCACCTCAGGCGGCGGCCATGAGCCCCTCGCCTCCCCCTCCCCACCGCGGCGGCCTCTTCTCCTCCAACCCGCTGCGCTCCAATGGGTCCCCCTCCCCCGACGCGTGGTGGTCCTCCTCGAGGGAGGAGATGGCCAGGGAGGGCTCGCCGGTCGATGGTGTCGTGCACCCGCAGCAGCACCCGTCTCCGACGACGGCGTCTGGGCAGCAGTCGCAGCAGCAGAAGGTGACGCTCATCACGCTGCCGCCACCCAGGGAAGTTGCGCGGCCGGAGATGCCGAAGGATTCGACACCTTCCGCTGGCCGTGTCGACGAGGAGGAGTGGGTCACCGTTTTTGGTTTTTTACCTGGCGATACCAACTTGGTACTGAGAGAATTTGAGAAGTGTGGTATAGTCTTGAGACATGTCCCTGGTCCAAGGGATGCGAACTGGATGCATATCCTGTATCAGAGCCGGCATGATGCACAAAAAGCTCTCGCCAAGCACGGTCAACAGTTAAACAGTGTTCTTATCATCGGTGTGAAGCAAGTGGACCCATGGCAGCGGCAGTACCTGAATGAGAAGACAAATGAGAACTTTCAAGTTGGTGCAACAGATCCATTTCCATCACAGCATGTAGCACCAAGTTCATTTACAACTAGAAATGCACTAGCACCTTTGCCTAGCAATTCTATGCCAAATGGAATCGGCAACGGGAGTGGCCGTGGTGCTTTGGGGGCCATTGCTTCACCCACAAAATCAGTATTGTCCAAAGTTATGGACCTGATGTTCGGCCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MSASRPDHRRHHPPFLRDLSSPISSAVRLPPASLRRETQGSTTPPPPPPPLLFLDDLSHHSPSPRPATPPQAAAMSPSPPPPHRGGLFSSNPLRSNGSPSPDAWWSSSREEMAREGSPVDGVVHPQQHPSPTTASGQQSQQQKVTLITLPPPREVARPEMPKDSTPSAGRVDEEEWVTVFGFLPGDTNLVLREFEKCGIVLRHVPGPRDANWMHILYQSRHDAQKALAKHGQQLNSVLIIGVKQVDPWQRQYLNEKTNENFQVGATDPFPSQHVAPSSFTTRNALAPLPSNSMPNGIGNGSGRGALGAIASPTKSVLSKVMDLMFGL</aaseq>

Gene Sequence

<dnaseqindica>1..542#1185..1296#2581..2910#ATGAGCGCATCCAGGCCGGATCACCGGCGGCACCACCCGCCGTTTCTCCGGGACCTCTCGTCGCCGATCTCCTCGGCCGTGCGGCTGCCCCCGGCCTCCCTCCGCCGCGAGACGCAAGGTTCCACCACCCCGCCGCCGCCGCCGCCGCCGCTGCTGTTCCTCGACGACCTCTCCCACCACTCCCCCTCGCCGAGGCCCGCCACCCCACCTCAGGCGGCGGCCATGAGCCCCTCGCCTCCCCCTCCCCACCGCGGCGGCCTCTTCTCCTCCAACCCGCTGCGCTCCAATGGGTCCCCCTCCCCCGACGCGTGGTGGTCCTCCTCGAGGGAGGAGATGGCCAGGGAGGGCTCGCCGGTCGATGGTGTCGTGCACCCGCAGCAGCACCCGTCTCCGACGACGGCGTCTGGGCAGCAGTCGCAGCAGCAGAAGGTGACGCTCATCACGCTGCCGCCACCCAGGGAAGTTGCGCGGCCGGAGATGCCGAAGGATTCGACACCTTCCGCTGGCCGTGTCGACGAGGAGGAGTGGGTCACCGTTTTTGGGTATGTGGCCTCTCCTCTTACTGTTATGATAGTAGGATGATTAAGTTATAAACTAGTATAAGTTTGATGAAATTTGTGGCATTGGGTTCATATAGTTGAGTATGTGTTATGCCATATTTCAATTAAATCTACATAGTACTGCAAAACGATGATTGTCTAAGTTGATCAGTGAGTATGTGATTGGATGCTATGTTGTCTTGATGTTTCTGTTGTAGTTGAATCGATATGCTGAAGTAGAGAATAGAGATCGTGATTCATTTCAGTAATTGGAAAATTTTAAGGTTTTGAGTGTAGGAAGTTGGAAAAGGAGATCCCAAAAATCTAGTTAAATAGTTTAGCAAACCTTTTTCTTGGGATGAATTAATATATAATTTCACGTGCACTAGACAGTCAGAAACAGCATCCTGATGCTATTCTTTCTTTTGGGGGAATCGTCATGAATGTATCCATATGACCATGCATTCGCTCTGTACATATTGTTCCCTTAATTTAGCTTTCAATAGAATATGATTCTCATTGTTGTACTTAGGTTTGTCCTCGTCTTACTCTATCTCGAATAGTTCCCCTGACTTGGTGCATATTTGATTACACTGTTTTACATAATTCACTTTGATAATGTTGCCCCTGTCTTTGTCCTTCCAGTTTTTTACCTGGCGATACCAACTTGGTACTGAGAGAATTTGAGAAGTGTGGTATAGTCTTGAGACATGTCCCTGGTCCAAGGGATGCGAACTGGATGCATATCCTGTATCAGGTAAAAACTTTGATGACTTAATTGTTTTAGATTTGATAAAAGATAATTACCGTGTTTCTATTGCATATCAATAGCCAAAAAAAAAGGAGAGCAAGCTCAAAATGTAACTGGCTTGTAAAGTTGTTAAGTTGTGAAGGGGAGGAGTCCAGTGGAAATGATACCTCTTAATGGCTATGGCCCAGTTTTAAGTCTACATGAGGGCCTTGCAAAGTTGCAAGCTCTGAGCTGGCCTGGCCCAGAATTCATAACAACTGTTTGACTATACTGAGCGCTTGGGATGACAAAAGATAGATTGTGGTCTTTAGGAACTTTTTATTTCAGGAATATAAAATGATTTTGACCTGTACAGGTCATGACATGTTGAGTTGAACCCCTTTCTGCACTGTTTGATGAGGATCTGCGCTTTTCTTCGTTAAGAATTTTACATGTCTTTTGGTTATGTATTATCTGAACTGCTCTAAAAGTTACCTGCTTTTCATTTTGGTCAGGACATGATTATGAAAAGTTTGGAACATTATGTAATTATGTAAGCAGCTAAGAGCATCTCCAAGAGGTTAGCCAAATGGTCTTATGGCTAGCTAGCCAAGAAAGTGCCTAGCCATATTTCCTGTGCACTCCAACAGACTAGCCAAATTCCCAAATCACACTCTCCATAGTTCATATTTTTTGGTGGGCCATAATAGTGAGTGTAGGTGGGGAATGGCTAGCCGGATGGCCCAACCAATGGCTAGTCTGTTGGAGGACCTCTTTTTTTTTTTTTTTGCTACGCTAGCCAAATTTTGGGATGGCTAGTCATACACGTAGTCTTTTGGAGATCCTCTCATATGCCTGCTCTCTGCTAGTTTTGGTCTCTCTGCATTTGTTTCAGAATCTAAATTGTTTAGATGTGAAAACAAATCAACACTAAACCAAAAGATGGATGGTGGCACAGACGCACAGTTTGTGATTTGTGGACCTAGTACATGACAATATCTCATGCATGAACTATGAGGTGACAATGTGGCTCAAGGGTCAATATTTCCCTTTCATTTGATCGTCATGTGTATTTTGTTAGGATAGATTGCAGAATTCAGATGTAGTATGATAACAGTACATTGATGTGATGAGCTTTTCCTACCAGCAATAATGTTCGTATGTAGGGCTTGACCATATGCTTAATTCAATCATGATTACAAACTACAAATATATGCGAGATATCACTGAATGTTCCTGTTGCCAGTTCTGACCATTGTTTGTTATGTATGTTTCTAATTGCTGATCTCTATCTTGTTCGACATCTTCCAGAGCCGGCATGATGCACAAAAAGCTCTCGCCAAGCACGGTCAACAGTTAAACAGTGTTCTTATCATCGGTGTGAAGCAAGTGGACCCATGGCAGCGGCAGTACCTGAATGAGAAGACAAATGAGAACTTTCAAGTTGGTGCAACAGATCCATTTCCATCACAGCATGTAGCACCAAGTTCATTTACAACTAGAAATGCACTAGCACCTTTGCCTAGCAATTCTATGCCAAATGGAATCGGCAACGGGAGTGGCCGTGGTGCTTTGGGGGCCATTGCTTCACCCACAAAATCAGTATTGTCCAAAGTTATGGACCTGATGTTCGGCCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002953