BGIOSGA003395

From RiceWiki
Revision as of 18:23, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003395

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003395, complete gene.

LocusTag

B1135C02.24-1

Ensembl Transcript ID

BGIOSGA003395-TA

Ensembl Protein ID

BGIOSGA003395-PA

Length

3958

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13768893..13772850

Sequence Coding Region

13768893..13769129,13771921..13772355,13772449..13772850

Genome Context

<gbrowseImage1> name=IndicaChromosome01:13768893..13772850 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:13768893..13772850 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCGAGAGGCAGCTACTGCAGGCGGGTGATGGGCGTGGCCGTCGCCGTGGCGGCTTGCGCGCTGTGCCTCCTGCCGGCGACGACCAGCGGCGCGCTCCGCGTCGGGTTCTACCAGAGCAGCTGCCCCAACGCCGAGGCGCTCGTCCGCCAGGCCGTCGCCGCGGCCTTCGCCAGGGACGCCGGCGTCGCCGCCGGCCTCATCCGCCTCCACTTCCACGACTGCTTCGTCAGGGGGTGTGATGCATCCGTCCTCCTGACCAAGAACCCCGCCGGTGGCCAGACGGAGCGCGACGCGGCGCCGAACAACCCGAGCCTCCGGGGCTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCCTGCCCGCGCACCGTCTCCTGCGCCGACATCATCGCGTTCGCCGCCCGCGACAGCGTCAAGCTAACCGGCAACGTCGACTACCAGGTCCCCGCCGGCCGCCGCGACGGCAGCGTGTCCAACGGCAACGAGGCCCTCCACAACCTGCCCCCGCCCAACGCCACGGCGCAGCAGCTCGCCGACACGTTCTTCGCCAACAAGTTCCTCACCCTCGAAGACATGGTCGTCCTCTCCGGCGCCCACACCGTCGGCCGCTCCTTCTGCGCCTCCTTCTTCAACCGCGTCTGGAACGGCAACACCCCCATAGTGGACGCCGGGCTGGACCCGGCGTACGCGGCGCAGCTGCGGGCGCTGTGCCCCACAAGGGACACGCTGGCGACGACGCCGATGGACCCGGACACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTGCCGCAGGGGAAGGGGCTCTTCTTCTCCGACAACCAGCTGCGGGTGAACGCCACCATGAACGCGCTGGTGACCCGGTTCGCGGCGAACGAGGCGGAGTGGAAGCAGCGGTTCGCCGACGCCATGGTGAAGATGGGCCACATCGAGGTGCAGACCGGGCGGTGCGGCCAGATCAGGGTCAACTGCAACGTCGTCAACCCGTCGACCTCCTCGCCGGAGGTCGAGCTGGCCGGCGAGGATCAGGAGACCGGAGGCGCCGTCGCGGCAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAPRGSYCRRVMGVAVAVAACALCLLPATTSGALRVGFYQSSCPNAEALVRQAVAAAFARDAGVAAGLIRLHFHDCFVRGCDASVLLTKNPAGGQTERDAAPNNPSLRGFEVIDAAKAAVEAACPRTVSCADIIAFAARDSVKLTGNVDYQVPAGRRDGSVSNGNEALHNLPPPNATAQQLADTFFANKFLTLEDMVVLSGAHTVGRSFCASFFNRVWNGNTPIVDAGLDPAYAAQLRALCPTRDTLATTPMDPDTPATLDNNYYKLLPQGKGLFFSDNQLRVNATMNALVTRFAANEAEWKQRFADAMVKMGHIEVQTGRCGQIRVNCNVVNPSTSSPEVELAGEDQETGGAVAAS</aaseq>

Gene Sequence

<dnaseqindica>1..237#3029..3463#3557..3958#ATGGCTCCGAGAGGCAGCTACTGCAGGCGGGTGATGGGCGTGGCCGTCGCCGTGGCGGCTTGCGCGCTGTGCCTCCTGCCGGCGACGACCAGCGGCGCGCTCCGCGTCGGGTTCTACCAGAGCAGCTGCCCCAACGCCGAGGCGCTCGTCCGCCAGGCCGTCGCCGCGGCCTTCGCCAGGGACGCCGGCGTCGCCGCCGGCCTCATCCGCCTCCACTTCCACGACTGCTTCGTCAGGGTACCTACTACTGAAACCCAGCTAGTGCATATAGTAGTATAATGCAGAAATTATTGACCACCATCTCCATGAATATCTGTTTGTATAATGTTTATAGAAGCACATGCATATACGTATATGCCTGCAAAATGTCTGGCTTGCAAACGGGAAATAATCGACTTATGTTTGATGTGCTTAACTTTTTTCTTAAGACAATGTTTAACTAAACACTTGAGAACAGCTAGCCCAGATTTTCCCAGTTGGGGAACCAAAATAAAACACTTATTTTGTTAATGATGATTAGTTTATCTACTTTTCACAAATTAATCCTGAAGATTTGAATTTTCTAATATGTTGGCGATCTGCATATTTGCCACATTATTAGAAACTGGATCGAGTAAACATCTACCCAACTAAACTTATTCAGGTCTATGCTCCATCTATGCATAGCTCATACAAATACTTAAATTGGAAAAGAACTCAACAATTTTTCAAAATAGTTCTTTGCAAGTTAGTTTCCATGAATCCTTACATGTGTGAGGATCAATATATGCACGGTGAAAATGGACTTGTAGGGGGCTTTTGACATCTCTCTCTAAATCTGTAATTGTCGTTTGTGTTGCTTTTCAATTAGTTTTACTAATTAATATCATGTCTGCCTTGGGCCTTGGCTAGCTTATTTTTATGCTTCTCCGTTGCTAACTTGAGCTTAATTACCTCTTTTCAACCATGCATCCCTCAAGCGATCTACCAGCAGTATTGATTTTTTTCATTTACTTTTCGTCCCCAGAATGCATGAATTAAGCTATTAATTTAAGACTAAGACCACCAGCAAATATTCAAGTACTAGTATTTAGATTTTCCATAGAAAAGATATATTTGTCATCACACCAAATTAAATTAAGAACTACACGCAAAAAAAAAGAACTTTGATTCCATTGTATATTTAACAAAATCTATCGATATACTTTTGAAAAAGATAATGCTCAAACATGTGTCTAAAAATGAAGACATTAAAGAACAATTAAAGAGACCCTGGTCATGCTTAATGAAAACCAAAAAAAGGTAGAGTTGTCTCTGAAGACAAAGGGAACAAAGTTAAAAGCCATAAAAGAAAAGCTACCAAAATCAGAAAGCATAAGTGTATATAGTTACAGAATCAAAGCAGCTTTCTTTCTTTCAAGGGAACCGCATATACCCTGCTTGCAATGGGTGACAAACAAAAAGCCTCCCAGGCTCCCATTTGGCGAATCTCAGTATGTTCCTTTCGTTTCCTCAATCCCCATTGATCCTTCATTTTTTCAGGTGTCGTATTAACATCCAGTACTGCTTGACACTGGCAGTCGTAAATATGTACTCCTTAGTTTGATAGTATCAAAAATGGTATTTAACTCGTTGAATATCATATTTTGATGGAACAATAAGGTGTGATTTAGTTCAAGTCTTCAAGAGTATAATAAGGATGTGTTCGTTTGGCGACAGGAATGCTCCCTCTCGGCACACAAAATAGAGCGGCGAAATAGCGCATGATTAATTAAATATTTACATAAACAAACTTAAAAAATAAATTAATATGATTTTTAAGCAACTTTTCTATAGAGAAAAGTTTTTGCGAAAACCGTTGAGCAGTTTAGAAAGTAGAAAGTATATGCACCGAAAATGAGGAGACAGAAGAAGTTGAGAAAATGTGGTATAGACTACAACTTAAGATGTACTTTAGTCTATGTAGAGCTAGGCAACATATATATGACACAATAGGAGGTTAATGGCCGGAGTTTACAGCACGTGTATGTAGAGGAGTAATGTAGTTGACTATGTCACTAGGAGGTGGAAGAAGGGACGTGACATTGGATCTAACGATGCGAAACATGGACGGAGTCACAAATCAGGTTGGAGGAGCTTCTCGCTGAAACCAGAAATAAGCTAGGAGGTGGAGGAAGGGGTTGGTATGTTGTCCTTAATAAGAGCTAAAATCGATTGATTATTTGTTTTTTACAGCTATTTAAGGTTATAAACAAATAAATTAGCTATTAAAAAGTTGGAAAAATATTTTATAAATTTTCTAGTAGAAGATCGAGTAGGATAGAGGTGAAATGAATCTTCTAGTAATAATGCCTCAAAAAATTCTAGTCGACCTCACACAATAAAACAATAAGCATGTTAGTTAAACTGAGCATTACTAAAAACATATTAATTTGTTTGTTTGGATTACAATAAAGACGTAGACATGTACACATAGCTATATTAGTTAAACCGGGTGTCATCAATTTACCTGTTGATTTGAATATATAGTTGTAAGCTTCTTCAGTACTCCCTTCATTCCATAATATGTACTCCCTTCATTCTATAATATAAGAGTCAAACTTGGCACAGTCTATAATTTCTCATATACTATAAGGTTTAAACAAAATTATAACCATCTTAAAGTAAATTTAAATGTCAATCTAATGATATTAATTTTAGCAAATGAAATTTAATTTATATTATAATAATTGTTGGTCAAATGTTTTTATTTATGAATTTTGGAATATGTGCACACCTTATATTATGGGATAGATGGATTATATTTTTTAAAATACTTCAGTAATCAGTCAGTGCTAGAATTTACACAAGCATGTACTATCTACATACTCTCTCCGTCCCATAAAAAATTAACCTAATATTGGATGTGACACATCCTAATACAATGAATCTAGACATTGTACTAGATTCACTTTTTTCTGGGACGGATGGAGTACAAGATGAAACATTTTGAGTTACCTTTTTTTTTTCTTTTTTCTGAAAGAAATTCCTTCCTGTTACTGCAATGCAGGGGTGTGATGCATCCGTCCTCCTGACCAAGAACCCCGCCGGTGGCCAGACGGAGCGCGACGCGGCGCCGAACAACCCGAGCCTCCGGGGCTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCCTGCCCGCGCACCGTCTCCTGCGCCGACATCATCGCGTTCGCCGCCCGCGACAGCGTCAAGCTAACCGGCAACGTCGACTACCAGGTCCCCGCCGGCCGCCGCGACGGCAGCGTGTCCAACGGCAACGAGGCCCTCCACAACCTGCCCCCGCCCAACGCCACGGCGCAGCAGCTCGCCGACACGTTCTTCGCCAACAAGTTCCTCACCCTCGAAGACATGGTCGTCCTCTCCGGCGCCCACACCGTCGGCCGCTCCTTCTGCGCCTCCTTCTTCAACCGCGTCTGGAACGGCAACACCCCCATAGTACGTCGCCTCGCCGCGCCGCCGTCGTCCATGGCGCCCCCCATGCTTTTTCGCAGTTACGCGGTGTGACGGTGCGTGCGCGTGTGTGTGCAGGTGGACGCCGGGCTGGACCCGGCGTACGCGGCGCAGCTGCGGGCGCTGTGCCCCACAAGGGACACGCTGGCGACGACGCCGATGGACCCGGACACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTGCCGCAGGGGAAGGGGCTCTTCTTCTCCGACAACCAGCTGCGGGTGAACGCCACCATGAACGCGCTGGTGACCCGGTTCGCGGCGAACGAGGCGGAGTGGAAGCAGCGGTTCGCCGACGCCATGGTGAAGATGGGCCACATCGAGGTGCAGACCGGGCGGTGCGGCCAGATCAGGGTCAACTGCAACGTCGTCAACCCGTCGACCTCCTCGCCGGAGGTCGAGCTGGCCGGCGAGGATCAGGAGACCGGAGGCGCCGTCGCGGCAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003395