Os11g0490100

From RiceWiki
Revision as of 21:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0490100

Description

Protein of unknown function DUF579, plant family protein

Version

NM_001074455.1 GI:115485558 GeneID:4350540

Length

1378 bp

Definition

Oryza sativa Japonica Group Os11g0490100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19110492..19111869

Sequence Coding Region

19110587..19111495

Expression

GEO Profiles:Os11g0490100

Genome Context

<gbrowseImage1> name=NC_008404:19110492..19111869 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:19110492..19111869 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagatgccggggcgcctgctcgccgccggagcggcggcgctgctggtggcggcgtcggtgatggtggcgacgctgctgacggcgccgctgccgttcctgccgtcgctgatgccgtgcctgcccgcggtgaccgcgccgtcggggtccgggtactcgccgccgggcctcgcggccctcgccgacgccgccgtgaggtacgccacgacgccgaccgtgccgcagcagtcgcgcgccgagatctcgctgtcgctggccgtgctccgccgccgcgcgccgctgcggctgctggtgttcggcctgggccacgactcgccgctgtggcacgcgctcaacccgggcggcgccaccgtgttcctcgaggaggacccgtcctggtacagcgtcgtgcggggccagtcgccgttcctccgcggccacctcgtcgcctaccgcacgcgcctcgaccacgccgaccgcctcctcgccacctacaaggaccacccctcctgcctccccggcggcggcggcaatggcggcggcgacgtgccgcgcgtgcgggggaacgcggagtgcccgctggcgctgcacaacctgccggcggaggtgtacgagaaggagtgggacatggtgatgatcgacgcgcccaaggggtacttcgcgtcggcgccggggaggatggcggcggtgtggacggcggcggccatggcgcgcgggcggcgcggcgagggcgacaccgacgtgttcctccacgacgtcgaccgccgcgtggagaaggcctacgccgaggagttcctctgcgagaggttccgcgtcggcgccaccggccgcctctggcatttcaggatcccgccggcgtcgcgccgcgggaacggcacggcggccgccggcggcgccggcgccggcgatgggcggcgacccttctgctaa</cdnaseq>

Protein Sequence

<aaseq>MKMPGRLLAAGAAALLVAASVMVATLLTAPLPFLPSLMPCLPAV TAPSGSGYSPPGLAALADAAVRYATTPTVPQQSRAEISLSLAVLRRRAPLRLLVFGLG HDSPLWHALNPGGATVFLEEDPSWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKD HPSCLPGGGGNGGGDVPRVRGNAECPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPG RMAAVWTAAAMARGRRGEGDTDVFLHDVDRRVEKAYAEEFLCERFRVGATGRLWHFRI PPASRRGNGTAAAGGAGAGDGRRPFC</aaseq>

Gene Sequence

<dnaseqindica>96..1004#gcacacgcccacgcgctcccctcgcacgccaccggacgaacacctcgccgacaacctttgctccggcgaccggaggtcggagagagagaagagagatgaagatgccggggcgcctgctcgccgccggagcggcggcgctgctggtggcggcgtcggtgatggtggcgacgctgctgacggcgccgctgccgttcctgccgtcgctgatgccgtgcctgcccgcggtgaccgcgccgtcggggtccgggtactcgccgccgggcctcgcggccctcgccgacgccgccgtgaggtacgccacgacgccgaccgtgccgcagcagtcgcgcgccgagatctcgctgtcgctggccgtgctccgccgccgcgcgccgctgcggctgctggtgttcggcctgggccacgactcgccgctgtggcacgcgctcaacccgggcggcgccaccgtgttcctcgaggaggacccgtcctggtacagcgtcgtgcggggccagtcgccgttcctccgcggccacctcgtcgcctaccgcacgcgcctcgaccacgccgaccgcctcctcgccacctacaaggaccacccctcctgcctccccggcggcggcggcaatggcggcggcgacgtgccgcgcgtgcgggggaacgcggagtgcccgctggcgctgcacaacctgccggcggaggtgtacgagaaggagtgggacatggtgatgatcgacgcgcccaaggggtacttcgcgtcggcgccggggaggatggcggcggtgtggacggcggcggccatggcgcgcgggcggcgcggcgagggcgacaccgacgtgttcctccacgacgtcgaccgccgcgtggagaaggcctacgccgaggagttcctctgcgagaggttccgcgtcggcgccaccggccgcctctggcatttcaggatcccgccggcgtcgcgccgcgggaacggcacggcggccgccggcggcgccggcgccggcgatgggcggcgacccttctgctaaggaagtaaggattgcgatttttggaggggcttttttacaaaatggcctcgattaagcgggtgaaatacaaatactgctactactactacgaaaatacgatcgtcgtgtaggaaatttccggattcctctatcctctgccacttgcaaattcaaaacttgggatattttaaatttgaggtaaacattctgaacagagatagatgctagagagtgatttgagtctctcgagatcactaaagttggtgtgaacaacaacacggtgtgtatctcttttcagtttgtaataatagaaacaatgaggtgattttgttttttttttttggtatgagtacatactaatttttgaataacattggtacatcaggttaaccttg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0490100, RefSeq:Os11g0490100