BGIOSGA020912

From RiceWiki
Revision as of 16:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020912

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020912, complete gene.

LocusTag

OsI_23652

Ensembl Transcript ID

BGIOSGA020912-TA

Ensembl Protein ID

BGIOSGA020912-PA

Length

4434

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25215031..25219464

Sequence Coding Region

25219407..25219464,25219252..25219280,25217700..25217783,25217381..25217434,25217005..25217082
,25216365..25216418,25216125..25216184,25215937..25216032,25215716..25215817
,25215550..25215630,25215031..25215324

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25215031..25219464 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25215031..25219464 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGCCGCCGCCTGCGACGCCGCCGTCGAGGAGCTCACTCGCCTCCTGGACCAAGTCGAGGAGCCGCTGAAGCAGACGTTCCAGAATGTGCACCAGGGCTATCCAACAGACACACTAGTGCGCTTCCTAAAAGCTAGAGAGTGGCATGTTTCAAAGGCTTGTGATATGCTTGTGGATTCCTTGAATTGGAGGATACAAAATGAAATTGATAGTATACTGGAGAAACCTATAATTCCTGTAGATTTATATAGATCAATACGTGAGACACAGCTTGTTGGATTATCAGGATACTCAAAGGAGGGCATCCCAGTATTTGCCATTGGTGTTGGACAGAGTACATATGACAAAGCTTCGGTTCATTACTATGTGCAATCTCATATTCAAATCAATGAGTACCGTGACCGTATTGTTTTGCCTATGGCATCAAAGAAGTTTGGGCGGCCTATTAGCACCTGTATAAAGGTTCTAGATATGACTGGATTGAAATTGTCAGCACTCAACCAAATGAAGATTTTGACTGCAATATCTACTGTTGACGATCTGAATTACCCTGAAAAGGCAGAGACCTATTATATAGTTAATGCTCCATATATATTCTCGGCATGTTGGAAGGTTGTGAAGCCTCTCTTGCAAGAGAGGACACGGAAGAAGGTTCACGTTTTGCATGGTTGTGGGAGAGATGAGCTTCTAAAGATTATGGACCACTCCTCCCTTCCCCATTTCTGTCAGCGGGAAGGCTCAGGATCATCTAAAAATTCGTCGAACGACGTCAACAATTGCTTCTCTCTCGATCATCCTTTCCACCAAGAGCTCTACCACTACATTGAGGAGCAGGCATTGAACCAGGAGCTCATCAAGCAGGGCTCCCTGCATGTGAATATCCCTGACCAAGATCCTGAGGATGCCAAGATCGTCGAGGTCATCGAAGCCGAGTTCCATAAGCTCGGCGAGCAGAACGGTTCTGTCAATGGCGAACACAAAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MGAAACDAAVEELTRLLDQVEEPLKQTFQNVHQGYPTDTLVRFLKAREWHVSKACDMLVDSLNWRIQNEIDSILEKPIIPVDLYRSIRETQLVGLSGYSKEGIPVFAIGVGQSTYDKASVHYYVQSHIQINEYRDRIVLPMASKKFGRPISTCIKVLDMTGLKLSALNQMKILTAISTVDDLNYPEKAETYYIVNAPYIFSACWKVVKPLLQERTRKKVHVLHGCGRDELLKIMDHSSLPHFCQREGSGSSKNSSNDVNNCFSLDHPFHQELYHYIEEQALNQELIKQGSLHVNIPDQDPEDAKIVEVIEAEFHKLGEQNGSVNGEHKE</aaseq>

Gene Sequence

<dnaseqindica>1..58#185..213#1682..1765#2031..2084#2383..2460#3047..3100#3281..3340#3433..3528#3648..3749#3835..3915#4141..4434#ATGGGGGCCGCCGCCTGCGACGCCGCCGTCGAGGAGCTCACTCGCCTCCTGGACCAAGGTGCGCCACCGCCGCCGCCTGGCTTTGCAGTTCCTTCTTTTTTTAGAAAAAAAGGAAAATTGGAATTGGTGGATTTTTCGTATGCGTTTCGTTGGTGGTAATCAATGTGTGCTCGGGTTCTTGCAGTCGAGGAGCCGCTGAAGCAGACGTTCCAGGTACGTATTGGGTCTTTTGGTGTGATCTTTAGCCTGTTGATTCATGGCTTTCGTGTCAGGTCTGATCTTTTTTTATGCTGTACAGTTTGATCAGAGAGATTCAGGCCATTGCTTAGTTCATTTCGATAGTTTGCAGAAACTGAATTTGTTTTAGATGTACCAAGTTTTCTCCATTTTTTATGATTTATAAATTATAAACTTACAGTAAGCTTGGATGATGTCTCGATCGTAATCAGTACTAGGAGAATTTTGCGTCTGGGGAACAATAATGGATCTATGAACAACATTGAAGGTTGGGAAAGTTGGAGCTAAGGTTGTTAGGATGAAAGGTGTTCTGCTGTTCTCTTCTTTAGGCCACATATTTGGGACTTTTTTTAGGGTAATTTTTAGTGGTTTTACAATTGGGCCGAGCAACGCGTGTTTTGTGTTGCTTTCCACAACGGATGGTCCCAAGGGATTGTTCTGTAAAAGTCCACCAAATCAGCTAGTGGACAAGAGTGGTTCTTGGCACTTGAGCACCCTGATATATTTTTTAGCTTGCTCTCATTGGGGGAATTGAGAGGTTTGTTGGTAATAATATAGTGTTCATTTGTACCTTTTTCCTTGGGCTTCGGCCGTTACGCATTCTTCTTGTAGCTCTTCCAAGTTCTTTGGCATCATTTCATCGTCCTTTTGCTCTTGGTTTATGCTCTTTAGAAGTAAGGTTTATGGACATGCACTGGGTGCTGAGTAGGACATGCCTGCTTGTTTGGAGCAGAATCCCATGGCTAGTGTGAGACTACTAGTGTCCTCGCAAAAAAAAAAAGGAAAAAAAAGAAAAGAAAAGAGAACCAATGGCTAGTGTAGTGGCAATCAAAATGGGGTGCTACTCGCATCAGAATTGTTGTGTCACTGTTATGGTAGTGTTGGGCAAAGTATTGGAAAATGAACAAGCATTTTTTACTTGAATGCTACAGTATTAAGAGGCCAAATGATTCAACTCCGGTGGATATTCCTTTTTTTTTCTGTTTGTTTTAATTTCTTTTAGAGAATATATTTGTCGGTCATCTAAACAACAAATTTATGTGCATTCCTTCCATTATTTTTGGAATGGAGAGCTTCTAGATGATCTTTATTGCATATTATCTATTTTTGAAAGTTTTGTATGATAAAGGTATTGATTCCTTCTTTAAATAATAAAACCTGATTCTAAGGGCTCAGATTCTATGATGGATAAAGGAATAAAAAGCAACTCAAGATAAGCATATACCTAGAACTAATTCAGCTATTTTTGAAAGCTGAAACAGAGTGTTGCTATGGTCAAACTAGTATCTGATCCTACTTGGCTACCACAAATCATTTTTGGTACATTTCAGCCATTTTAGATATCAAAATTATTTGTTACTATTAGAGATTGTAAAGTATCATGTGCTGCCTAAGAAGATTGCCTCGTAGTTCTCAACTCTCAAGTATATCATTCCTTTTTCAGAATGTGCACCAGGGCTATCCAACAGACACACTAGTGCGCTTCCTAAAAGCTAGAGAGTGGCATGTTTCAAAGGCTTGTGATATGGTAATATTTTACTTGTTTAAATTGTACTTCCTCCGTTTCATATTATAAGACTTTCTAGCATTGCCAACATTCATATATATGTTAATGAATCTAGATATATATGTGTGCCTAGATTCATTAACATCTATATGAATGTGGGTAATGCTAGAAAGTCTTATAACCTGAAACGGAGGTAGTAGTTGTTTACTTGTTTCCCATTTGATGAATGATGAACAAAAAATGATTCTTGGATTGCTTCATTACTTAAAGATTTTGTTTTTGCTAGCTTGTGGATTCCTTGAATTGGAGGATACAAAATGAAATTGATAGTATACTGGAGGTGAGCAATCCTTCTACTAGAACAAGCTTGGTTATTGACTGTGTAGTGTAAAGCCTAATCTCCCAACGAATGTGGCGACCTTCCCCCTCCTGTATCTTGTCCCCTTCGTGTTTTTGATTTTTCGGCCTGCTCTGTAAATACTTTTATTCCTTCTTAATACAAAGATGTGCCCCTCGCGTATTCCCAAAAAACTGTGTAGTGTAAATATATTCTTGGGGACAGAGTTTGGTTTTTTGGTAACTTTTTATAGTTTATGTTTTGTTATTTTTGATCATCTTGATCTCTTGAACAATTGCAGAAACCTATAATTCCTGTAGATTTATATAGATCAATACGTGAGACACAGCTTGTTGGATTATCAGGATACTCAAAGGAGGTACAGATATCTTAAGCTAGTTATTGTTTTCAATTTGTTCCCTTATTAATACTACACTTTTCATATATGTAGGATCTGCTGTTGAATTAGGATGTGTTGATTAACCTGCAATTTTGTTCATAGATTTAATCGGATGCAGCTATTCCTTTGCTTTTATGTGTGTAATAGTTTTTTTTTACATTGGCTTTTGAAGTTCTGATACTCCATATTCTTGAACAATACATTTCTGATGGATAAAATAAGGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTTTGTTACACTGAAAAAGGTTATGTGGCCTTGACCAGTTTTGAACTTTACTTGATTCGAATTATTCAGGAGAATGATATCATATGACTTGACATTGCTATTTTGAAACTCTTCACTAGGAAGATGTTTATGGAAGTAAGGTGTTGCCTACTGTAGGAGTAGGATGTATTAGTGATTAGTGGATGGTATCTATGTAAAGTAGATAACACATGTACCAACCATTTCAAGTTTTTAATACTTCCCGTCGGTCCTTTTATTTTTCCAGGGCATCCCAGTATTTGCCATTGGTGTTGGACAGAGTACATATGACAAAGCTTCGGTAATTGCTCATATACTTCTTATTGCTTTCTGCCCTGTAGTTAATGAAATACAGACTTATGAGTTCCTATAGCTTGTCAGATTTCATCCTTGAAATGTCTTTCTAGTGAATTGATAAGTAGATCGCACCTCATACCTTTCTCTCTAAGTACATTATTAATGATCACGCGTTCATTTACAGGTTCATTACTATGTGCAATCTCATATTCAAATCAATGAGTACCGTGACCGTATTGTTTTGGTGAGTGCACTACTAATATTTCTTGCTCAATTAATAGATTGTTTATATGAGTTTTCTTCACACGTATATTTGCTTTCTTATGTTCCATCTAGCCTATGGCATCAAAGAAGTTTGGGCGGCCTATTAGCACCTGTATAAAGGTTCTAGATATGACTGGATTGAAATTGTCAGCACTCAACCAAATGAAGGTACTGCATACATGGACGTGGCATATTCAAATGTTTAATTTCTGTATAAGATCTGCATATCATGAACAATTATCCATTATTTGTGCTGCTAGTGATTAGATACCATTGATGGATGACAGATTTTGACTGCAATATCTACTGTTGACGATCTGAATTACCCTGAAAAGGCAGAGACCTATTATATAGTTAATGCTCCATATATATTCTCGGCATGTTGGAAGGTACAGTACCTAATATTATTTTCCCTAGTTTTTCATTAGTTCTTTATTTTGAAACATAAAACAGTTCATTTGGTTTCGCTACTAGGTTGTGAAGCCTCTCTTGCAAGAGAGGACACGGAAGAAGGTTCACGTTTTGCATGGTTGTGGGAGAGATGAGCTTCTAAAGGTAAGATTGCTTGCAATTACTAATATTCTTTTCAAATTGCTATAGTTATGTTTACTCTGGTAATTCATTGCTGGGCATTATATTATCGCATTCCTATTTAAAAGTCACTCACTTAGGAGAACCTTTTGTTCCATGGAACTTGATCAGAATATTCCTATCATTTTATTCTTTTGCATTCGCAATACTATGATGATCAACGCACGCATTTCTGTCAAAACTACGCAGATTATGGACCACTCCTCCCTTCCCCATTTCTGTCAGCGGGAAGGCTCAGGATCATCTAAAAATTCGTCGAACGACGTCAACAATTGCTTCTCTCTCGATCATCCTTTCCACCAAGAGCTCTACCACTACATTGAGGAGCAGGCATTGAACCAGGAGCTCATCAAGCAGGGCTCCCTGCATGTGAATATCCCTGACCAAGATCCTGAGGATGCCAAGATCGTCGAGGTCATCGAAGCCGAGTTCCATAAGCTCGGCGAGCAGAACGGTTCTGTCAATGGCGAACACAAAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020912