BGIOSGA021511

From RiceWiki
Revision as of 16:36, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021511

Description

Signal recognition particle 9 kDa protein

Definition

Oryza sativa Indica Group BGIOSGA021511, complete gene.

LocusTag

OS06G0257200

Ensembl Transcript ID

BGIOSGA021511-TA

Ensembl Protein ID

BGIOSGA021511-PA

Length

3147

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9215724..9218870

Sequence Coding Region

9218799..9218870,9218627..9218695),complement(9215894..9215987,9215724..9215800

Genome Context

<gbrowseImage1> name=IndicaChromosome06:9215724..9218870 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:9215724..9218870 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTACTTCGATTCGTGGGACGAGTTCGTCAGCAAGTCCGTCGAGCTCTTCCGCAACCACCCCGACACCACCCGCTACGTTGTCAAGTACCGGCACTGCGAAGGGAAGCTCGTGCTCAAGGTCACCGACAACCACGAGTGCTTGAAGTTTAAGACAGATCAAGCTCAGGATGCAAAGAAGATGGAAAAACTGAACACCATTTTTTTTACTCTCATGACCCATGGACCTGATGCTGATATAAGTGATGTTTCGGGGAAGGAACAGGCAGAACAACAGCAATCAAAGAAAGGCCGGGGCAGGAGGCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MVYFDSWDEFVSKSVELFRNHPDTTRYVVKYRHCEGKLVLKVTDNHECLKFKTDQAQDAKKMEKLNTIFFTLMTHGPDADISDVSGKEQAEQQQSKKGRGRRQ</aaseq>

Gene Sequence

<dnaseqindica>1..72#176..244#2884..2977#3071..3147#ATGGTGTACTTCGATTCGTGGGACGAGTTCGTCAGCAAGTCCGTCGAGCTCTTCCGCAACCACCCCGACACCGTAAGCCCGCCACCACGATCCTCTCCTCTCCTCCCCTCCGATCCTCCCTCCCGGCTTTTCTTCCTGCCCGATCTAACCTTCCGCTTCGGTGTTTGCATCCAAGACCCGCTACGTTGTCAAGTACCGGCACTGCGAAGGGAAGCTCGTGCTCAAGGTCACCGACAACCACGAGGTACTCGGATCGAACTTACTTTTTTTTTCTGGATTTGTTTCGTTTAACTAGGCCACGGGCGCCTCGGCGAAAATTTGGGTGAAAATTGGCAAGTAAACGCGAACGGATGGAGCGGAATTGATCAGATAGAGAGAATTCTGGATATGTTGATTCTATTCGTTCATATATGTAACTTCCTATGGATTGATTTCGTTGTGTTTTGTGTAGATTATCGATTTCGTTGTGTTTTCTGTAGAATATTCATTGGTTGTGTGATCTGGTTATCAGCATGTGTAATACCATCCGCCGTGAGAACACTGCTTTAGCAGGGTCAATTTGCCAATTACAATGCACCTCCTGAATATGCTATGGTAGCTCTTGTTATGAAGTAGAGAATGTATAATAAACACTTATTGCATATGAAATTGGAACGGCTGCTGTTTGTCTGAGTGATGTATGATTCTGTTGATAAGTGTGAAAAGCTAAAGTAATTTATGTATTCCATTATAGTTTCCCATATATGGTCATGCTTACCTTTCCATTCTACTTTAAGACAAATAATTTGTGTTTAGGAAGTACACTTGTGCTCATCGGTTTCTTTTTATACAACAATATGCAATATGACCTACTTTATTTGATTAATTAATTATTGAAGGGTGAATGTGAGATAGGATATCAAACATATCAATTATACATCTATTTCTCTACTAGAAAAAAAATGCCCATGCGTTGCAACGGGTGAATGTTATTTTAATCTTATTATTGTTATACGGTTTAGCTAGGATGAAATTCAATGTGGGAATTCGCTTGGATATTTTTTTTTTAGAAAATTATGAGCTGCAATTAGGAGTCCGACTTTCATCTCAAGTTAGCATGCAAATTTTTCTAAAGAGATTTCTTATACGACTCCTTTTGTATTTCCAAAAGTAAACGAACCTAAAATCCGACTCAAATACGGATCTATATTTCCAAAAGCAAACGAACTTAAAAACCAAGTAAAATACGGATGACGTATCAAAATACCAGCAAAAACATCTTCAATTTTTATAATAGTAGAGAAGAGATAGAGATATATTCTAGTCCAGATTTGCAACTGTTCTATGCTTGTTTGACGCGTGGTGTGGCTGAATTTATTCATCGTTCTATGCTGCTTGTTGTCTGCTATATATGATGTTCAACAAGACAGGATTGACAGTATATAATGGATGCCTAGCTGTTAGTTCTGTGCTCTTCTGGTACTACTAGGAAAGCTTTGACTGAAAGAATGCCACAATAAATAAATCACTGTAGTGTCTTTTAATTGCACATTGTGATGCATCAGTTTTCATCAGTTTGTGGTTGAACAAGAAGGCTAGGATTTTGATATCACCATGATGAATCCTCTACTCTTTACTATAATTAGTTTAACCCAGTCAAATGGAATGAGAATATTGCCCTGAGTTTCTACTGCAAACAAGGAGCTGAAAATCTGACAGAATGTTCTTCAGCTGATTGCTCTGGCATAATTGACAACTACTTGTTACTTGGTAGTCCTTTCTGTGTGTAAATGTTTATTGTGTGTTGATGAATGCCTTGTCAATTATATTCCACACAAGACACGACCCAATAGGTAGCGCTTAATAACACTGCGAAATCATTTCTTGCTTACAGAGAATGTTAGAGCTTCTTCTGTTGCCATCTATTTGGCTGGCAGGTGTATATTGCATGGGAAAGAAAGTTTTTAGCTGTACCTATGAACCCCCTTGGCAAATACTGTGACTCAGAAGGTGTGGCGATACTAGATTTAAAATTACAATATACTAAACCATGGGGATACGAGGCAACTGACATACCATTATTTTGACAACTGCTGCACATTAGGAGCATTATTAATGTTAGCCTCATATTGTGCATGTGTGGGAAGTGGTACTCTTTTTCTCAGCATTTTCACAGCAATGTGTCTATCCAATGTTAATGTCGTACTCAACTAAGGAATTGTGAAGCTACACAGTGATCCTCTATTATGCTTTGCTGGTGTGCTTTTGATTTCTAGGGCAATGGATTGTCATAAATGGCTTTATTTTCCTTTGTTAGTTGCACAAAAGATTAGCACATGTTTTCTTTTAGGAACGAGAGTAGCAATTACAAGAAAAGCAGCGAGAACACCGAAGAGGCCAGCTAATGGACAAAGTAAAGTCTGGACAAGAGTAGCAATTACCCACGTGGCATCCACCGCTGTTGTTTCCAAGTACAATTTGTGTAATTGATAATTCGAGGAGTATTAGGCCATGATTTGTGTTGAAAATTCCAGGGCTTCGTATTTGGCGTAGGATACAGAGAATACAATTAGTTCCTGTTGTTTTCTTTTTGTAGCAAGTTTGTGTTCGTGAACTCCAACTGGTAAAACTCTAGAACAAATTTGGCCCGTAGCTAATACTACTACTTGCTTGAAATACTATTTTTATGTTTTATTGCAGTTGTAGATGTTCTGCTGGAATCTTGCAATGGATGCTTATATTATGTTGGTTGCAGCAAATTTGTTATAACATGCGCTCTCCTGTACTACTGTAACTGTTGTAATATTCCATTGTATTTGATTAAAGACATTGTATTCTGGTGTCAATTGCGTATATGTATGATCCAAATAGGAACTACTTTGCTGACCGAAATGTATACTGCAGTGCTTGAAGTTTAAGACAGATCAAGCTCAGGATGCAAAGAAGATGGAAAAACTGAACACCATTTTTTTTACTCTCATGACCCATGGACCTGATGGTATGTCTATTTTCTCCAGAGCTGCGGACATTCTATGTCAAGCCAATATAAGTGATGTTTCACTAATGTATTCCTACTCTTTACGTTGTGCAGCTGATATAAGTGATGTTTCGGGGAAGGAACAGGCAGAACAACAGCAATCAAAGAAAGGCCGGGGCAGGAGGCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021511