BGIOSGA022796

From RiceWiki
Revision as of 16:43, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA022796

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022796, complete gene.

LocusTag

OS06G0319600

Ensembl Transcript ID

BGIOSGA022796-TA

Ensembl Protein ID

BGIOSGA022796-PA

Length

5897

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13159946..13165842

Sequence Coding Region

13159946..13160050,13160145..13160222,13160307..13160414,13160777..13160839,13160919..13161080
,13161319..13161432,13161558..13161620,13161811..13162140,13162766..13162930
,13163005..13163940,13165571..13165641,13165791..13165842

Genome Context

<gbrowseImage1> name=IndicaChromosome06:13159946..13165842 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:13159946..13165842 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGAGTAACAATGGTAATGGCTACCTCGGTGTGACTGAGCCAATCTCATTGAGTGGTCCAACTGAGAAGGATGTTGTCCGCACGCAGGAGGTTGAGAAGTGTCTTGCTGACGCTGGCCTGTATGAAAGCCAAGAGGAAGCTGTCTCACGAGAAGAGGTTTTAGGCAAACTGGACCAGATTGTCAAGGCTTGGATTAAGAAGGCAACTCGAGCTAGTGGTTTTGGCGACCAATTTGTGCAAGAAGCAAACGCAAAGATTTTTACTTTTGGCTCATACCGACTAGGGGTTCATGGCCCCGGTGCAGATATTGATACGCTTTGTGTGGGTCCAAGGCATGCAACTCGAACTGAATACTTTTTCCAGGCTCTTTATGATATGCTAGTTGATATGCCAGAGGTCACAGAGTTACATCCAGTGCCAGATGCTCATGTTCCTGTTTTGAAATTCAAACTTAATGGGGTTTCTATTGATCTTTTATATGCTAATCTTACACATGTTGTTATTCCTGAGGACCTGGATCTTTCGCATGACTCTATATTGCACAACGTTGACGAACAAACTGTCCGAAGTCTTAATGGATGCCGAGTTACTGATAAAATTCTACGATTGGTTCCAAATATTCTGACTTTCCGGACAACCTTGAGATTCATGAGATTTTGGGCAAAACGCCGTGGAGTCTACTCAAATGTTATAGGGTTTCTTGGTGGTATAAACTGGGCACTTCTTGTTGCTCGTATATGTCAACTATACCCAAATGCATCACCAAGCATGTTGATATCTCGTTTTTTCAAAGTCTACAGCAAGTGGAAGTGGCCTAATCCTGTTATGCTTTGCCATATTGAAGAGGGTTCTCTTGGTCTTCTTGTGTGGGACCCAAGGAGAAATTTTAGAGACAGGGGTCATCATATGCCTATAATTACACCTGCTTATCCTAGTATGAATTCTAGCTATAATGTATCTATCAGTACTAGGCATGTGATGGTCCAAGAATTCACACGAGCTTCTGATATCTGTCAGGCAATAGACGAAAGGAAAGCAGACTGGGATGCTTTGTTTGAGCCATATCCATTTTTTGAATCGTATAGAAATTATCTAAAGATTGAGATCACAGCAAGAAATGAAGATGACCTCAGGAATTGGAAAGGTTGGGTAGAATCCCGGCTTCGTACGCTTGTATTAAAGATTGAACGATTTACACGTGAGATGCTCCTCTCACATCCTAATCCTAGAGATTTCATCGACAGCTCCAGGCCATTGCATTGTTTTTACTTTATGGGTCTCTGGAAAAAACAAATCAGCCAAGCTCAAGAAGCTGAGCAGTATGACATTAGAGCAATTGTGAATGAATTTAAAAGCAATATCCATGCATATCAACACTGGAGAGAAGGAATGGAAATTGAAGTTTCCCATGTAAAAAGAAAAGATATCCCATCATTTGTTTTTCCTGGTGGAATCCGTCCTTCTCGCCCATCAAGAACAGTTGGCAAGGAAGCTCGGGCTGTTTCAAGAAGTAATATTTCAGCTAATGTTCAAGAAAGAAATGTTCCAAGCATGGCCCAGCCTATGCCATATAAGAGTAGTGAAGTAAACAAAATTCCGTCAGATCCTCATGGTGGCTATCAGTCGCAAGAAAGAAATAATGCAGTGGTCTCTAGTTTGCCCTGTGAAGAAACTGGCCATATGTTCAATGGGTATGCAAATCTCCATACAGAATCTGTTGAGCTGGAACACTTGAGAAGCTACAAGGGAAGTACATCTGTTCCTGAGAACCATGTTGTGCATGATTTAGTCAAGCCACCAGAGAGCATGCCACCTAACTCAATCCATGTTTATCCAAGTCCAACAAATGGATTGGGCCATCTTTTAGATAGTTCTTGTAAAAAACCAGCAGACATCATTGTAAATAAAACCACAAATTTCTCTTCAGCTGTCCTAGCAGTACCTGATGAACTTGATGAGCTGGATTCTCATCAAGTGAAGGTAAATCAGAAAGATTTAACTGCAGTAGATCAAGGATTATCTTTGGAGCATAAAGTTGGAAGTAATGGGGGCAAAGCAGGAACCACAGGTTCACCTGACAACAATCATCTGAAGCGTAAAGCTGAGGAAGAGCTTGAGCCACTTGAGCTTGCTGCCCCACTAGTTCGCCCTCCTGCACCAACGTCCACGACCCAGAGGAGACCCTTGAGACTGAGATTGTCAACTGTGGTGCAACCCAAACCTGCTGAAGGAACTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MAKSNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSRSNISANVQERNVPSMAQPMPYKSSEVNKIPSDPHGGYQSQERNNAVVSSLPCEETGHMFNGYANLHTESVELEHLRSYKGSTSVPENHVVHDLVKPPESMPPNSIHVYPSPTNGLGHLLDSSCKKPADIIVNKTTNFSSAVLAVPDELDELDSHQVKVNQKDLTAVDQGLSLEHKVGSNGGKAGTTGSPDNNHLKRKAEEELEPLELAAPLVRPPAPTSTTQRRPLRLRLSTVVQPKPAEGTS</aaseq>

Gene Sequence

<dnaseqindica>1..105#200..277#362..469#832..894#974..1135#1374..1487#1613..1675#1866..2195#2821..2985#3060..3995#5626..5696#5846..5897#ATGGCGAAGAGTAACAATGGTAATGGCTACCTCGGTGTGACTGAGCCAATCTCATTGAGTGGTCCAACTGAGAAGGATGTTGTCCGCACGCAGGAGGTTGAGAAGGTAGGAGTTTGGATGGCTAGTCGATAAGTGACTTTGACAATTTCTTGTTTGATCACTATGTTTGTAATGGTATTGTGATTTTGATTCTGATCAGTGTCTTGCTGACGCTGGCCTGTATGAAAGCCAAGAGGAAGCTGTCTCACGAGAAGAGGTTTTAGGCAAACTGGACCAGGTTGAGCATATGTCCTTTGTGTGCTTTTCTGATTGTACTTTGTGTAGGTGATGTGCAATTATTAGTAACCCTTGTCTTTGGCAGATTGTCAAGGCTTGGATTAAGAAGGCAACTCGAGCTAGTGGTTTTGGCGACCAATTTGTGCAAGAAGCAAACGCAAAGATTTTTACTTTTGGCTCATACCGACTAGGGGTACTCTGCACCTCATGCATGTTTTATTCAGATTGTAAAAGATCGTGTTCAATTAATATAGCCATTACCTTTTGTGTTATATGGTTTGATGCTGTTTAATAGAAAAGTGTCCTGCATTAAAATATAGGATAACTATCCTTTTGCTTTCTTGTTTTGTCTGACATTGCCATTAGATATCAGTATGATTGGATGCACATACATCTGTTCGTTTTGGTTCACTGATAGGTACACTGTTTTGCTGCATGCATATGAAGGTTCAAATTTAGCAATACCTGAGACATTCTTGCTTGTTGGCAATTTTTGTTGGTTTGGTACCCATCTATGCCAAGAGTTGTGAACATTGTTCCTTGGTATTTTCCTAGGTTCATGGCCCCGGTGCAGATATTGATACGCTTTGTGTGGGTCCAAGGCATGCAACTCGAACTGTAAGAGGAACTGCTTTGGATTTCGTGGAATTTTGAGTGCATTGCATAGTTTGCTTTATAAAATGCACTTCTTTTGCAGGAATACTTTTTCCAGGCTCTTTATGATATGCTAGTTGATATGCCAGAGGTCACAGAGTTACATCCAGTGCCAGATGCTCATGTTCCTGTTTTGAAATTCAAACTTAATGGGGTTTCTATTGATCTTTTATATGCTAATCTTACACATGTTGTTATTCCTGAGGTAAGTTCTGTTTTATATCTTTCTTAGTGTAACAGGCAGTAGTCTGGGGTTTCTTGCATGCTACATAACTAGATTGACTGTATGGAAGTGCTCACTTCTTATATTTATTCATTTTATATCTTATGATGTAATACAATATTACACTTATGAATGTTTTTTATGGCACTTCCTTTTAACATTAGTTGCTCCATCATTTTCTTATAAGCATCCCTAATAATGCTACATCATTTCATTGCAGGACCTGGATCTTTCGCATGACTCTATATTGCACAACGTTGACGAACAAACTGTCCGAAGTCTTAATGGATGCCGAGTTACTGATAAAATTCTACGATTGGTTCCAAATATTCTGGTTTGCACCTCCTGCATTGTCTATTTTTCAGATGATATGCTAAATGCTCTTTGGTGGATACGGTATGATGGCCGTTTATTCGCTTCAGTAAGTAACTTTGCATGACCCATTCTTTCCAAATGCAGACTTTCCGGACAACCTTGAGATTCATGAGATTTTGGGCAAAACGCCGTGGAGTCTACTCAAATGTATGACCTGGACTTTTGTCTGTTCATGCAATATTACATTCCATGTGTATCTGATCAACAGTTGTTCGCATATTTATTATTTGTGGGCTCGTGGCCTATGCATAGACATAATGTGTGCGTATGTGCGTGTGCGTGTGGATTTTTTTTTGTTTTACATGTTTTCTTAACGAAAGTTAGTGTCTCTTTCCAGGTTATAGGGTTTCTTGGTGGTATAAACTGGGCACTTCTTGTTGCTCGTATATGTCAACTATACCCAAATGCATCACCAAGCATGTTGATATCTCGTTTTTTCAAAGTCTACAGCAAGTGGAAGTGGCCTAATCCTGTTATGCTTTGCCATATTGAAGAGGGTTCTCTTGGTCTTCTTGTGTGGGACCCAAGGAGAAATTTTAGAGACAGGGGTCATCATATGCCTATAATTACACCTGCTTATCCTAGTATGAATTCTAGCTATAATGTATCTATCAGTACTAGGCATGTGATGGTCCAAGAATTCACACGAGCTTCTGATATCTGTCAGGTACATCTCATTGCAGAGTTGTTTTTATTTTAGTAGTAAACATGAATTGCTGCTAACTGGTAGAGGAGCCTTACTGCTGGTCAATCATTTTGATCTGTTGGATAACCCAAGGTGCAAAATAGCATAAATTTTTTTTCTGATGCATCAGTCCTAAATTCATAATTCTGAAAGGCAAACTGACAAGTCTAAGATACAGTGCCCGCTACTTTATATAATGAGAGCATTTGACCATGTTTCTAAAAGAAAAAAACACGAAGCATCTGAAATACTTATGGTCAAGAAAACATGGTTTTCAAAATGCATCTTTGACAACTAATTTCTCCTACGAATATTTGTAAAACCTGACAAATCTGTGATACTTGGAAGCTATTTGAGAAAAATCTAGACACGATTTTCATGAATCAAATCTAAATATTTAAAAACATATTGATGTTCAAAGTTTTAAAAGTTTGAGTCAGATGTCTGAAACAACATGTTTTCTTGGCCAGAGAGAGTACTTGTCGGAGGATTCATACATTTTCTAAATGTTGTGATATATTTGCAGCAAACAGTACTTTTTTAAATGATCATCGCTGCAAATAAATTTCATGTTTGCATTTAATGTCTGTTTGATTACTTATTGTAGGCAATAGACGAAAGGAAAGCAGACTGGGATGCTTTGTTTGAGCCATATCCATTTTTTGAATCGTATAGAAATTATCTAAAGATTGAGATCACAGCAAGAAATGAAGATGACCTCAGGAATTGGAAAGGTTGGGTAGAATCCCGGCTTCGTACGCTTGTATTAAAGGTGATGTACTGAAACATTTCTTTCTTTTAAGAAATTAGCTGTATTGTAATGTACCTTTATTTGCTTTTATTCAGATTGAACGATTTACACGTGAGATGCTCCTCTCACATCCTAATCCTAGAGATTTCATCGACAGCTCCAGGCCATTGCATTGTTTTTACTTTATGGGTCTCTGGAAAAAACAAATCAGCCAAGCTCAAGAAGCTGAGCAGTATGACATTAGAGCAATTGTGAATGAATTTAAAAGCAATATCCATGCATATCAACACTGGAGAGAAGGAATGGAAATTGAAGTTTCCCATGTAAAAAGAAAAGATATCCCATCATTTGTTTTTCCTGGTGGAATCCGTCCTTCTCGCCCATCAAGAACAGTTGGCAAGGAAGCTCGGGCTGTTTCAAGAAGTAATATTTCAGCTAATGTTCAAGAAAGAAATGTTCCAAGCATGGCCCAGCCTATGCCATATAAGAGTAGTGAAGTAAACAAAATTCCGTCAGATCCTCATGGTGGCTATCAGTCGCAAGAAAGAAATAATGCAGTGGTCTCTAGTTTGCCCTGTGAAGAAACTGGCCATATGTTCAATGGGTATGCAAATCTCCATACAGAATCTGTTGAGCTGGAACACTTGAGAAGCTACAAGGGAAGTACATCTGTTCCTGAGAACCATGTTGTGCATGATTTAGTCAAGCCACCAGAGAGCATGCCACCTAACTCAATCCATGTTTATCCAAGTCCAACAAATGGATTGGGCCATCTTTTAGATAGTTCTTGTAAAAAACCAGCAGACATCATTGTAAATAAAACCACAAATTTCTCTTCAGCTGTCCTAGCAGTACCTGATGAACTTGATGAGCTGGATTCTCATCAAGTGAAGGTAAATCAGAAAGATTTAACTGCAGTAGATCAAGGATTATCTTTGGAGCATAAAGTTGGAAGTAATGGGGGCAAAGCAGGAACCACAGGTTCACCTGACAACAATCATCTGAAGCGTAAAGCTGAGGAAGAGCTTGAGGTCTGTTCCCTCACATCTGAATTACTTCTTTAGGCTGCGATTATATATTATGTTTTACGCATTTTACTATAGTGGCTTATGATTTAACTTTATATTTTATTCTGACCTGCATTTTAATACATTTTTTTTGTAGAAATACGCCATATATACTTGGGTAAATGATGAATGCTTTTTTACTTTTTTAATAAGATGTTACCTGTGATTCCTAATGCTGCTCTATTAGAATTGATTGCTCTATATCAATTGTTTGCAAACTTCCTATTCCAGGAAAGCATTTTTTTTTCTTATTTACTTTACTTCACGGCGCATCATGGTTGGTTGTACTGTCTTTATGCTTTTACTGTGTCCGGTTTCTTACTTGCCGTTTGACATGGACTCCAATGCACATATTTGCCCAATACTACATAAAAGCTATTAAAACATAATGAAATAAACCATTTCTTATTACAAATTAGTATTAAAAAATATAATGATATGAAATCATTCTTCATTACAAATAAAAGTGCCATACTCACATGACAAACCTTAAGATTTGCCATTATTTTGGTGAAAGTTTTAATGTTTGGTTGCTTGTATTCACATATCTATGAGAATAGGAGGGATGAAGTAATATGGTGCTTTTCTTTTCTTAGAATGTTAATGTGTTTTGTTTTTCTAATAGAACAGAACTGTTGTTTAAGTGCCTTTTTTGCATGTTAAGACTGCTTTAGTTTTAGTTAGGCTGTACATGTAATCTATTCGAAACTTTTAACTTTGTAGCTTAGTCATGTTTTCTTAATGGTACATTACAATGCATTTGTATTTATTTGAATTTTCATTCCACAACTTTATATATATATATATATATATATATATATATATATATATATATATATATAAATGAAGAGAGATTAGCTCAGTACTTAGTAGCACAAAGAGCTATAAATAGAAAAATACTATCCATATGAGGATGACAGATGGTTCCCAGGGCCACATGTCGCTGTCACATTGGATGATATCTTCCCATTTATACCTCTTTGCGAAGGCAGTGAGCAAAACTGTACTTGAAGGAATTATACTAAAATTGTTAAGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATATATATGGCTGTATCCATAGTAAGTAACAATTTTCATGAGCAGACAATTTAAAGATGGGTGTAAAAATTTATTGATTTGCACACTGTATTCCTCTCTTCTGTTGTCTTGTAAGAAAGCAGTGTTGATCAGTTACATAACAGATTATTTGTCAAGCTATGTATACAAGTAGAAGAAAGGCCTATCATGTGTCTTCTATGGCATGTTGTTTCGATCTTTATACTGGAAAACATCTATTGTATTTCTGGAAATGCTTTTTGGCTCGTAGGCGTCAATGATGGCTCCTGTTTTACATTCTTATTACACTGAATAAGTTCTCTTGGTTTTTTTTTCCCATGTTGATTAACTGCGACAGCTATAATGAAGGCTTTTCTGTTTTACATTCTTACACTGTAAAATTCTCTTTTTTTTTCATGTCGATTAACTGCTACTGTTATATTACACATTTAAATGTTAATGCTGGTTTTGTTCATTTGTTTGAAAATAGCCACTTGAGCTTGCTGCCCCACTAGTTCGCCCTCCTGCACCAACGTCCACGACCCAGAGGAGACCCTTGAGGTACTTCTTACTGCACAGTTTAATAGTCCATATATTCCTCATTTAAATGCAGTGCAATTTCTAATGAATCTGTACATTTGATGGTTCTGATTCTTTTTGTCAATTCCTACCTGTAATATATTGTTCTGAGAACAAATTGTTTTTTCAAGACTGAGATTGTCAACTGTGGTGCAACCCAAACCTGCTGAAGGAACTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022796