BGIOSGA023274

From RiceWiki
Revision as of 16:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA023274

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023274, complete gene.

LocusTag

OS06G0618600

Ensembl Transcript ID

BGIOSGA023274-TA

Ensembl Protein ID

BGIOSGA023274-PA

Length

6652

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25983401..25990052

Sequence Coding Region

25983401..25983743,25984146..25984223,25985057..25985214,25986216..25986279,25986460..25986551
,25986905..25987151,25987549..25987692,25987822..25987928,25988013..25988066
,25988138..25988221,25989353..25989516,25989908..25990052

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25983401..25990052 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25983401..25990052 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGGTGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATACATTATACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATAAGTGTCCGCTATATTTATTATGTTAAAAGTATATTGTTTGGAAGATCAATTGTATTGGGTAATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGAAGCTCGAGTCCCATTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGCTGACCATGTTGTGCCTGTCCCAGTGAACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGATGAAGATTCAGAATGGAGCAAAGCAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCATCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGTCGATGCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGAGGTGTGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATCAGAAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATGATTGGTGGAGCACTCACCTTCTTTCATGGATCTGGAACACGAAGATGCCTAGAGGTATCTGTTACCTTGGAAACATCAGAAACGGTTAATCCTCGTGTAATACATCCTTCGAGAAGGAGCTCACCCTCAATAACCAAGGTACACAGTGAGCACTATGAAGTTGTTGCGGATCTTCACCAGACAAGCTTTCTCTTTTCAGTTCCAATTGATGGACCAATGTCATTTTCCACTTCAAAAGTTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGAACATCCACTTCTCGTCGAGAAAAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACCTCCATTGCGTAGGCAAGCAATTCATGGAAGAAATGATAGATCTGTCTTAGTTGGGAACCTTTTCAACTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSLKLPIPQGLSFLRSVGWFEERKADAAAARQRHSPRLKLQTDREVYRPGDSVTATIEICTPAGLKDDAASAETGEDAPSLLVDGLSFEIKGIEKLDSQWFSVSKPLPGSKQRRGEHLFLDCSAPSLIPKVIIASGQTKTYIIRVELPKILPPSYRGISVRYIYYVKSILFGRSIVLGNGDQNIAPVNTAVQLEARVPLQICVSQKSSNLLNEEADHVVPVPVNFPLPIEQPDIFWREKDEDSEWSKANDNTDLEEGYDSSKDEVSSVSSYNKANPESSLRSSVSMHSLSSRLSTSEPLYSRERPSFPSYSPIPRLSVSEISDDHGGGVVSPQRKLNHLLSDHHPSNGQMFSLDPDRSNDDAGPPLTPKYVEPAGSEGFMRGRSYNIRIDDQVLLRFSPKNSDSTYYFGDMIGGALTFFHGSGTRRCLEVSVTLETSETVNPRVIHPSRRSSPSITKVHSEHYEVVADLHQTSFLFSVPIDGPMSFSTSKVSVQWSLRFEFFTTPEGIDSSRYEHPLLVEKREKGDWVLPITVYAPPLRRQAIHGRNDRSVLVGNLFNS</aaseq>

Gene Sequence

<dnaseqindica>1..343#746..823#1657..1814#2816..2879#3060..3151#3505..3751#4149..4292#4422..4528#4613..4666#4738..4821#5953..6116#6508..6652#ATGTCACTGAAGCTCCCGATCCCGCAAGGGCTCTCCTTCCTGAGAAGCGTCGGGTGGTTCGAGGAGAGGAAGGCCGATGCCGCGGCGGCCAGGCAGCGGCACTCCCCGAGATTGAAGCTCCAGACGGACAGGGAGGTGTACAGACCCGGTGATTCGGTCACCGCGACTATAGAGATCTGCACCCCAGCTGGGTTGAAGGATGACGCGGCGTCGGCGGAGACCGGTGAGGATGCCCCCTCGCTCTTGGTGGATGGGCTCTCGTTCGAGATCAAAGGGATTGAGAAGTTGGATAGCCAGTGGTTCTCTGTTTCAAAGCCCTTACCAGGGTCTAAGCAAAGGAGAGGTACGCTCTTGCAATCGACTTCAAACATGATTGTAACCATCTTTGACTTCAGTGCCACTGTACCAGTGCTACTACGTTTCATCTATCATATGTACTTCACCTCTGTTGATTTTATATCCATTTGCCATTTTGCATTTGCTGTCAGTTTAGTTAACCTACAAATTTGTTGTAGCTAGCATTTCTGTTTATGTTCTATTCATTGGATAGTAGTAGAACATTATGCATGGGGTTTTTAGAAACTAAGTTAAGAAATTGTAGTTTTGTCCCTTTCATAAGTTTGCGCCATGCTTGTTCAATTCTCTATGCATCCCTTTAAGTTTCTTTTATCATCTCTGGAAACAGTTAATTGCTGTTTTTATTTCTTCCTGATAATCTTCTTTTATATTGTCATTACATACGTAGGTGAACATTTGTTTCTGGATTGTTCGGCACCCTCGCTAATCCCTAAAGTTATAATTGCTTCGGGGCAAACAAAAACATGTAAGTCATCTCTTGTTTTGAAGGACTGATCTAGTTTAATGTCATAAAAAATGAATTGGTTTTCATTTGTGTGTTTCAGTTCAGTTTTTCCTAGTATTGCATGATAGTTCTGGAAATATGAATGATTAAAATTCTTCATTTTAGACATACCTCACAGTCTTGAACTAATTATGGTCTTGTTCGGTTAATCCCTCCCCCAAGGGGATTTGGAGGGGAATAATTCCAAACCTATTGAGGTGTGGAATTAATCCCCTTTAATCCCATCCAATCCATTCCTCATGTGGATTAACCGAACAAGCCCGTAAGAGACAGATATATGAAGTGACTAATATGCACTCTTGGCATAGTTAATACTCCCTTTGTCGATAAATATAGAGCCCACATTGATTTGAAGGTTTAAACTTTGTAACTTTTGACTAACAATTAGTCCAACAACACATATCTGTAGGTAGCGTACCAGGGATACCGTTAAGCTTCATGTTAAAAAATACTTTCACATTATGCTAATTTGGTAATTTTGCTGATGCATTCTAAAAGAAACTAACATTCAAAATTTAATGTTGGAGGCCATGCCAAATCATACCATGCCTTTTGTTAATGGAAGGAGTAGTGAATATTAAAAGCAGTATTCTCCTTAAGTTTTTCTAACCAGTCGTTCTAGTTCCTCTATGAACCTGCTATATTCTTCCATTAGTAATGGATTGTTGGCAAGCATCAGTTTTATTCTTGTAGCTTCATTCCAAGGAAATGCTTATAGAATTTCTGTGTAATATCTGGAATTTAATTATCTGAACCATATCAAGGATTTTAACTAAGCTAAAAGTTATCTGCAGACATTATACGTGTGGAGCTCCCGAAGATTTTACCACCATCATATAGGGGTATAAGTGTCCGCTATATTTATTATGTTAAAAGTATATTGTTTGGAAGATCAATTGTATTGGGTAATGGAGATCAAAATATTGCCCCTGTAAATACCGCAGTTCAATTGGTGAGTTCCATGCTCGTTTTCTATACGTCCATTCCAGCCTTAAAATTGTTCTCCTTAAGCTTTCATTATCTCTGCTTAATTGTGGAAATTTTGATCTAGTGATCAATTTGTGTGTTCTTTGCCGAAGTTACTATCAACTATTGAAGCTGTGACTTGTGTTGAAGAACTTGTCTGAGGACATACTTAGTAGATGTACTAGTTAGACATCAAGTTGGATCCGCAATCTAAGTATTCTAGGTAGAGAATTAGCAGTACCTTGTTTGGTATAAATACCATTCAAAACCACTAGGATATGATTTGTCTCTTTTGTGCCTTGTTCTTTCTCAATCTAGAATGAGATTACAATTCTATGTATTTCTCGTATCAGCCTAAGCGCTGAATACGTGGGTTGTCATCAAATTGTGCCTGCAGCCCTCATTTGATATGTTAAAAATAGATGCATGTGCTCAATGCTTGCATTAAATTTCTTTTGAGTAGGTTTTGGTTGGTGCGATTGTCTGTGTTGGCTTTGCAGGCCCTAAATGCTCGATTTTAGCTCAGTATCAAACCCATATCTTGGTACTAATGTCATTACGTTAGTATTTATGTGGACTACCAAGAATCAATATGATTTTTGTGTTGTCTGTGCTTAAGACATTTGTTTCAGTTTCATGCGTTCAGTCTTCATTCTTGTTCTTGTTAAGTTTTCTTATCAGACAAGTTTAGAGGCTTAGAGCATGATAAAATACACATGTTTAGAGTTGGTTCTTCTAGCTCTTTGCAACCACCTCTTAAAGTTTTGCGTCAGTGTTTTTTTAAGCTACATTTGAGGTTATCAGTGCTTGTGTATGATTACAATTTACTATTGTATTGGAAACCACCTGATGCCACCTCTTCATTTTATTTTTATAATCATGAACTCAATCTGAATTTGCCTATCCGTGTTTCTGGCATTTCATATAAGTGCAATTGTGTAAATACTCTACCTTGGAGTAAGACTAAAATCAACATGGTTATTGCAGGAAGCTCGAGTCCCATTGCAGATATGTGTTTCACAGAAAAGTAGCAACCTACTAAATGAAGAAGGTCAGTGGTGTGTATTTACCAACTTGAGGTGCTGAAACTTCACTAACTGTTTGTGAATGTGTACTGACTGAAAAATCATGATACAATAATATTTCATATGTTCTTATTTCTCATGATGCTTACTCCACTCCATTTTTGTGTGTATGCTCATTGAGCTTGCTATTCTGTTGGGATACATAGCTGACCATGTTGTGCCTGTCCCAGTGAACTTTCCACTCCCAATTGAGCAACCGGATATATTTTGGAGGGAAAAGGATGAAGATTCAGAATGGGTGGGTCCTTATATAAGCTGTTTTGCACCTCCCATATTTCACAATACTAAATTATTTCTTGATCCTTTTCTTACACATTTTCTTACATGAGTTGGCAAATATTTTCGTTACTTTGATGAAGTACAGCAGCATTTTGCAAAGAAATGCATCATAGTTTGTTAAGCATAAAAGATGAAAGCATTCATAAATCTTGAACTATTTTCCAACAGATGATATTTTGCATCTATGCATACAAAGTAATTCTAGTAATCCTCATCTGAACCATTGAGTCTAACGATTAACGTGCATCAGTATACATGCACTTGATTTATCGCTCTTTGCACTTATGTTGACACATCGAATTGTTTTTGCAGAGCAAAGCAAATGATAATACTGATTTAGAAGAAGGATATGATAGTTCAAAGGATGAAGTTTCATCTGTTTCCTCCTACAACAAAGCAAATCCAGAAAGCTCCCTCAGGAGCTCAGTGTCGATGCACTCCCTGTCATCACGTCTTTCCACTAGTGAACCATTGTATTCTAGAGAACGCCCCAGTTTCCCATCTTATAGTCCAATTCCTCGACTATCAGTATCAGAGATTTCAGATGATCATGGTGGAGGTAAGGTGGAGTATTTATTTTTTTGACGTGAATTTTTGAATTGTTCAAGAGGTACAAATCAACAATATTCTTAAGGAAATATTAAATATAGTCTCAAGTTTTTTTTCCCTATGTGATTCTTTATCAGTCTCTTCCTAGTGATTAATCTGCCCTTCAGCTCTTGTCATACTTTTAGTAATGTTCGTGATTGTAATATTTATGTCCGGTGGATTTTCCTTTTACAAATTGATCATATTTGTGGTGCATCTCATAGCATTTGTTTTGCTATTCCTAAAACCACAGCTTTGACGTGATTATGCCATTTGCAAATACAAAATTCTGATAGAGCATTTGTATAAGATATCCTTATTCTAGTTCATGATGGTCGTTTAATTTAATCGATCAATGGCACAAGCAGGTGTGGTGTCACCTCAAAGGAAGCTAAATCATTTGCTGTCAGATCATCATCCATCAAATGGACAGATGTTTTCTCTAGATCCTGACCGCTCAAATGATGATGCTGGACCACCTCTCACACCAAAATATGTTGAACCAGCTGGATGTAAGCCATCCTCACATACTGTTTCAGATCTGGAGTTACTATATCTCGCTATTCTCTTTATTATAGGTTTACATAACATGTAGTCAATATTGATTTGCAGTACTAAGTTGCCATTACAATTTTTTGCAGCAGAAGGCTTTATGAGAGGAAGATCGTACAACATAAGAATAGATGACCAAGTGTTGCTTCGCTTCTCACCAAAGAATTCTGACTCAACTTATTACTTTGGTGATATGGTATTGTCTGATTTGATTACATGTGTAACCGCATTATCAATGTTAGAAACTTATAACTGATTATCTCAGTTCTTCTAATTGCAGATTGGTGGAGCACTCACCTTCTTTCATGGATCTGGAACACGAAGATGCCTAGAGGTAAAAGGTTGAGTTGAGTAAAATGTGTATTGGAATGGGATTTCATATTGGGAATGTTTTGGTACTTGCAGGTATCTGTTACCTTGGAAACATCAGAAACGGTTAATCCTCGTGTAATACATCCTTCGAGAAGGAGCTCACCCTCAATAACCAAGGTATATTTTCTGCACTAGTGTTCTTATTATGTACCAACATCTGGTCAATGGTTTATTTGTGTAGCTTGAGCAATTCTTTAGTCCGATTAATAGTTTGTACGGAATCAGTTTGAACTTCTGTTCTTACCTACATAAAGTATTTACTTTGATTCCAATGATGTAGTTATTTTCCTCAAGCCTCAGCCATTTATATACAATTACAATATACTGATGCGATCTGACATACACACTAGTGTTCACAACCTCATAAAACCAATCTTATGTTGGTTAGCTACAAGGATGACCATGAATCAGATAACAATAACATCTGCACAATTTTTGTTGTTAGTTCATGACACTGCTTCCATCCTTTTTCCCTGTGTAAACATATGGGGTAAGCATCTGTTGGAAGGAGGTGGGAGAGCTGATAAGCTACTCTAATGAAGGACCCCTACCTTTTCTTTTCTTTTTTTCTTTTTACCGTGGGGAAGGAGTGTCGGGAGTACAATCACTGGCCAAGGGAGACCACAATGGGACTTTAGGGATTAGGAACTTGTTTACTCATCTTTGCTCGACTAAAGAAGGTGCAATGCCCTTCTGTGGTGATGACTCTACCTAGGAAATGTAGAAATAGTCTTTAGAAAACACATGGAGTACATTAGTAGTAAAGCTTCCAAAAGAAAAAATAACCTAACCTTTGGAAAAACAAACTACCTGTGCATGAACAGCAATTGCAGCAAACAGTAACTATGGAACAATAAGCATGATGGACAATGCCATTCGAACAGTAGGGATGTGCTTAACACTTTTATTTGTCGAGGAAAGGGCATGTGCTAATTGCCCTCAAACACAAAATATTAGTCATGGCCATCAAGAATCTATAAGCACCTCTGAGTCTTAGACTTTTACCTGCTATTGATAAATCTAGTGCATTCTAGTAACATGCCAATATCAAATGTTGTGTATTCTGCTAGCTTCTTTTTCACCAAAAAGACCACCTTTTGTCTTTATGTACTTACACTGTTTGCTTTCGACGGGAAGCAGGGTTACTTTGCTTGCCTTTTGGTCTAAAAAACATTTAGTCATTTACACTGTAAAATCAGCAAATTGATTTTAATGATTCACTCATTTTTCTCTGGACTCTCTGCAAAGGTACACAGTGAGCACTATGAAGTTGTTGCGGATCTTCACCAGACAAGCTTTCTCTTTTCAGTTCCAATTGATGGACCAATGTCATTTTCCACTTCAAAAGTTTCTGTGCAATGGTCTCTTCGATTTGAGTTCTTCACAACTCCCGAAGGAATTGATTCATCTAGGTATGTAACAGTATTAACAATTTTATGTGCTGTAGCCTGATAGCATTATCTTGGACACCGTGTCTCTTAACAGCGCAGGGTTGGATTGCTAAGTAGGCCACGAGTTGTTTCGTACCTTCTGTGCTGTTTCCATAATTTACATCAATAGTAGAATGATTCCTTCATAGAAATAGGAGATATGTTTTATGCTCATCGTCCTTAGATGTGCATAGCAATACACAAGCTATAATCACCACAGCTACAATTAGTTTCTTCAGAACTATGCTAATTATTGGTGTTAAGCAATTTGTTTCAACCATTATCTGGTACTGCCATACTGGGAAAGGGTGATCTTTTCTAGTCTGCTGCTGTTAGTTTTGAATCAGCAATTCTGGTTTCTCTCTTTTGGCAGGTATGAACATCCACTTCTCGTCGAGAAAAGAGAGAAGGGTGACTGGGTGCTTCCAATAACTGTTTATGCACCTCCATTGCGTAGGCAAGCAATTCATGGAAGAAATGATAGATCTGTCTTAGTTGGGAACCTTTTCAACTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023274