BGIOSGA018050

From RiceWiki
Revision as of 16:18, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018050

Description

Brassinosteroid insensitive 1

Definition

Oryza sativa Indica Group BGIOSGA018050, complete gene.

LocusTag

P0017D10.20

Ensembl Transcript ID

BGIOSGA018050-TA

Ensembl Protein ID

BGIOSGA018050-PA

Length

4658

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21478761..21483418

Sequence Coding Region

21482597..21483418,21481471..21482468,21481028..21481085,21478761..21479675

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21478761..21483418 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21478761..21483418 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAGATCATTATTATGCTCCTCTGAGGCTTATTCTTCTCTTGATATTGAGTGCCACTTGTTTTGGCTCTGAACTTGATGTTCAGTGCTTGAAAACCATATTCCAGTCAGTGACCGATCCCAATGGTATACTCAAATCCTCATGGAGTTTTGTCAACAACGGCACCCCTGGTTACATCTGCAAATTTACTGGGGTGGAATGTTGGCATCCAGATGAGAACCGAGTTCTTTCTTTGCGTCTCGGCAACCTTGGTCTTCAGGGTCCATTTCCTGCAGGCCTTCAGAACTGTACTAGTATGACTGGGCTAGATCTGTCGAGTAACAACTTTACAGGACTCATTCCTCAGGACATCTCCCAGCAAATACCATACTTGACATCACTGGACCTCTCCTACAATAGGTTTTCAGGCCAAATCCCAGTAAATATTTCAAATATGACATATTTAAACACACTCAATCTCCAACATAACCAGTTCACTGGTCAAATTCCACTGCAGTTCAATCTTCTTGGTCGGTTAACATCATTCAATGTTGCAGAGAACCGACTATCAGGGCCTATTCCAAATAATCTAAATAAATTTCCGTCATCAAATTTTGCTGGTAATCAAGGCCTTTGTGGGCTACCATTGGATGGCTGCCAAGCTTCAGCAAAGAGCAAGAACAATGCAGCAATCATTGGAGCTGTTGTTGGTGTTGTAGTTGTGATCATAATTGGCGTAATAATCGTATTCTTTTGTCTGCGGAAATTACCAGCCAAGAAGCCAAAGGACGAGGAAGAAAATAAGTGGGCAAAGAGTATCAAAGGAACTAAAACCATCAAGGTTTCTATGTTCGAGAATCCAGTTTCAAAGATGAAACTAAGCGATCTAATGAAGGCTACCAATGAATTTTGCAAAGAGAACATCATAGGTACTGGGAGAACAGGAACTATGTACAGGGCAGTGCTACCTGATGGTTCTTTTCTTGCTGTCAAAAGGCTACAAGATTCTCAACATTCTGAAACTCAATTCACGTCGGAGATGAAGACACTTGGCCAAGTAAGGCATCGCAACTTAGTTCCTCTCCTAGGATTTTGCATTGCTAAGAGGGAGAGGTTGTTGGTGTACAAGCACATGCCGAAAGGTTCACTCTATGATCAGTTAAATCAAGAAGAAGGCAAAGACTGCAAGATGGATTGGACTCTGAGGTTAAGAATCGGCATTGGTGCAGCAAAAGGTCTTGCGTATCTTCACCACACTTGCAATCCTCGAGTCCTTCACCGCAATATAAGCTCCAAGTGCATCCTCCTAGATGAGGACTACGAACCAAAGATATCAGATTTTGGACTTGCTAGGCTTATGAATCCAATAGACACCCACCTTAGCACCTTTGTTAATGGAGAATTTGGAGATCTTGGTTATGTGGCACCAGAGTATGCACGTACTCTGGTGGCCACGCCAAAGGGTGATGTGTACAGCTTCGGTGTTGTTCTTCTTGAGCTTATCACCGGCGAGAGGCCTACTCATGTTTCAACTGCACCGGAGAATTTCAGAGGGAGCCTAGTAGAATGGATCACCTACCTATCAAACAATGCCCTCCTCCAAGACGCCGTTGACAAGTCATTGATAGGGAAGGGCAGTGACGGCGAGCTAATGCAATTTCTGAAAGTCGCATGTTCTTGCACAATTTCCACTCCAAAGGAGAGACCGACAATGTTTGAGGTCTATCAGCTCCTCAGAGCCATTGGAGAAAAGTACCATTTCTCGGCGGAGGATGACTTGATGATGCTGCCACCTCTAAGCACAGATGGAGAAACCCTTGACGAGCTCATTGTTGCCCACCAAAGTGCACCTGAGTATGCAAGCAAACTTGGGAATTTCATTATTTCAACTTGCAGTGTCACCCACCCCACAGTGCTGTACCCACGTCTTCCTCATCCTAATCCCCACGCCGCTTTTCTCGGCTTTTCATCCCCACACGCTGATTCTCGCCAGACCGCCTCTTTCCTCTCCCCTCTCCACCTCACCGACGGCGGTGGCGGCGTCCTCGATGGCGGAGGCGGCGCGGTGGCCTCGCTGGCGGAGGTCCTCGAGGCGGCGGCTCAGATCTGGACGGACGGCGACGCGGCGGCCCACACGGCGGCTCGGCCACCACCGACGTCGACGCGAAGCAGCTCCAACCGACGGCGATGCGGCGGCACACGTGGCGGCGGCAGCGGCTCGGTCGACGACGGCAACCTCGGCGGTTGCCTCGTCGTCCTCCGCAGATCTGGAGCGGCGCACGCGGTGGTGGTGGTGGTGGTCGTCGTCGTCGCCACCGACGCGCCGTCGTCGTCGCCGCCGACGCCGCGTCGTCGTTGCCCGCGGTGGCGCACGCCATCCCCGCCAGCCCGACTCTCCCTCTTCCCGGCGCGCCGCCTACCCCAACGTCGAGCGGCGGCGACATCCTCGGGACCTGGCGAAGAAGCGGCGGCGGCTGCGCAGATTTGGAGCGTCCTCGCCGTCCTCCTCAACGACGGCGGCGGCGCCGCGGATCTGAAGACGTGGCGGCGGTGGCGCGTCCTCGCCCCGCCCTCCTCACCGACGGCGGCGGTGGCGTGTCCTCGCCCCACCCTCTTCACCGGCGACGGTGGCGTGGATTGGAGCTGGCCTCGGAGTCGCGCGTTCTCGTCCTCGCATCTCTCATCAGTGGGCCCCGCGCTCTACTTTTTAAGCGAGGTTCTCGTTCCTTCGCTGGGAACCGAAGAAGCTATTGAAGCTATGGGACCCATAAACTTTTTTTTGCCAGCGAGGACGAAGGAACGCTCCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MTDHYYAPLRLILLLILSATCFGSELDVQCLKTIFQSVTDPNGILKSSWSFVNNGTPGYICKFTGVECWHPDENRVLSLRLGNLGLQGPFPAGLQNCTSMTGLDLSSNNFTGLIPQDISQQIPYLTSLDLSYNRFSGQIPVNISNMTYLNTLNLQHNQFTGQIPLQFNLLGRLTSFNVAENRLSGPIPNNLNKFPSSNFAGNQGLCGLPLDGCQASAKSKNNAAIIGAVVGVVVVIIIGVIIVFFCLRKLPAKKPKDEEENKWAKSIKGTKTIKVSMFENPVSKMKLSDLMKATNEFCKENIIGTGRTGTMYRAVLPDGSFLAVKRLQDSQHSETQFTSEMKTLGQVRHRNLVPLLGFCIAKRERLLVYKHMPKGSLYDQLNQEEGKDCKMDWTLRLRIGIGAAKGLAYLHHTCNPRVLHRNISSKCILLDEDYEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELITGERPTHVSTAPENFRGSLVEWITYLSNNALLQDAVDKSLIGKGSDGELMQFLKVACSCTISTPKERPTMFEVYQLLRAIGEKYHFSAEDDLMMLPPLSTDGETLDELIVAHQSAPEYASKLGNFIISTCSVTHPTVLYPRLPHPNPHAAFLGFSSPHADSRQTASFLSPLHLTDGGGGVLDGGGGAVASLAEVLEAAAQIWTDGDAAAHTAARPPPTSTRSSSNRRRCGGTRGGGSGSVDDGNLGGCLVVLRRSGAAHAVVVVVVVVVATDAPSSSPPTPRRRCPRWRTPSPPARLSLFPARRLPQRRAAATSSGPGEEAAAAAQIWSVLAVLLNDGGGAADLKTWRRWRVLAPPSSPTAAVACPRPTLFTGDGGVDWSWPRSRAFSSSHLSSVGPALYFLSEVLVPSLGTEEAIEAMGPINFFLPARTKERSM</aaseq>

Gene Sequence

<dnaseqindica>1..822#951..1948#2334..2391#3744..4658#ATGACAGATCATTATTATGCTCCTCTGAGGCTTATTCTTCTCTTGATATTGAGTGCCACTTGTTTTGGCTCTGAACTTGATGTTCAGTGCTTGAAAACCATATTCCAGTCAGTGACCGATCCCAATGGTATACTCAAATCCTCATGGAGTTTTGTCAACAACGGCACCCCTGGTTACATCTGCAAATTTACTGGGGTGGAATGTTGGCATCCAGATGAGAACCGAGTTCTTTCTTTGCGTCTCGGCAACCTTGGTCTTCAGGGTCCATTTCCTGCAGGCCTTCAGAACTGTACTAGTATGACTGGGCTAGATCTGTCGAGTAACAACTTTACAGGACTCATTCCTCAGGACATCTCCCAGCAAATACCATACTTGACATCACTGGACCTCTCCTACAATAGGTTTTCAGGCCAAATCCCAGTAAATATTTCAAATATGACATATTTAAACACACTCAATCTCCAACATAACCAGTTCACTGGTCAAATTCCACTGCAGTTCAATCTTCTTGGTCGGTTAACATCATTCAATGTTGCAGAGAACCGACTATCAGGGCCTATTCCAAATAATCTAAATAAATTTCCGTCATCAAATTTTGCTGGTAATCAAGGCCTTTGTGGGCTACCATTGGATGGCTGCCAAGCTTCAGCAAAGAGCAAGAACAATGCAGCAATCATTGGAGCTGTTGTTGGTGTTGTAGTTGTGATCATAATTGGCGTAATAATCGTATTCTTTTGTCTGCGGAAATTACCAGCCAAGAAGCCAAAGGACGAGGAAGAAAATAAGTGGGCAAAGAGTATCAAAGGAACTAAAACCATCAAGGTGAAAATACCCTACTATTACTATTTATTTCCCTTTTCTTTTATAATACAAAAGAAATTTTGTGTAACATTATTCGTAAAAGAAGCTAACGTAAACTTCTTACTGTCATGGCCTTTTCAATTATTCAGGTTTCTATGTTCGAGAATCCAGTTTCAAAGATGAAACTAAGCGATCTAATGAAGGCTACCAATGAATTTTGCAAAGAGAACATCATAGGTACTGGGAGAACAGGAACTATGTACAGGGCAGTGCTACCTGATGGTTCTTTTCTTGCTGTCAAAAGGCTACAAGATTCTCAACATTCTGAAACTCAATTCACGTCGGAGATGAAGACACTTGGCCAAGTAAGGCATCGCAACTTAGTTCCTCTCCTAGGATTTTGCATTGCTAAGAGGGAGAGGTTGTTGGTGTACAAGCACATGCCGAAAGGTTCACTCTATGATCAGTTAAATCAAGAAGAAGGCAAAGACTGCAAGATGGATTGGACTCTGAGGTTAAGAATCGGCATTGGTGCAGCAAAAGGTCTTGCGTATCTTCACCACACTTGCAATCCTCGAGTCCTTCACCGCAATATAAGCTCCAAGTGCATCCTCCTAGATGAGGACTACGAACCAAAGATATCAGATTTTGGACTTGCTAGGCTTATGAATCCAATAGACACCCACCTTAGCACCTTTGTTAATGGAGAATTTGGAGATCTTGGTTATGTGGCACCAGAGTATGCACGTACTCTGGTGGCCACGCCAAAGGGTGATGTGTACAGCTTCGGTGTTGTTCTTCTTGAGCTTATCACCGGCGAGAGGCCTACTCATGTTTCAACTGCACCGGAGAATTTCAGAGGGAGCCTAGTAGAATGGATCACCTACCTATCAAACAATGCCCTCCTCCAAGACGCCGTTGACAAGTCATTGATAGGGAAGGGCAGTGACGGCGAGCTAATGCAATTTCTGAAAGTCGCATGTTCTTGCACAATTTCCACTCCAAAGGAGAGACCGACAATGTTTGAGGTCTATCAGCTCCTCAGAGCCATTGGAGAAAAGTACCATTTCTCGGCGGAGGATGACTTGATGATGCTGCCACCTCTAAGCACAGATGGAGAAACCCTTGACGAGCTCATTGTTGCCCAGTAACTGCAAACCCAATGTTCCACAGAAGGCAACCAAGTGGAGGTTGTTTCTTCTGCGCGTCATTACCATGCTTAGATGAGTGAGGTGGCTTTACATGATGTACTATTAAGTAGTATCAGTATACTGCATCCGCTGTATAATTTTTGTAGCTTGTTGTTATCTACCATTGGGAGGTGCTAGCAGCAGCAATGATAATCTTTCACTCAACCGATATGGGGATGGGGTATTAACTACTCCTAATAGTAGTTTGCTCCTCATGTGATGGGAATATGCCATATTGGCATTTATTCAGTCATTTTTCATGTTGTCATTTGTACTTACGCCACGGGATGAGGAATACTGAACGTCAAAATGTGTGGAATGCCACCTTATGATGTCTTCCAGCCAAAGTGCACCTGAGTATGCAAGCAAACTTGGGAATTTCATTATTTCAACTTGCAGTGTAAGAGTAGTGGGTCATTGTCTTTTGTAAATGTAGTATAGCTTTTGCTGGTTGAAACTATTTTTTTTCTTGGTCTATAAAAGCTTCTTTTCATGCTAGCCACTTCTATTGTTGAAATATGCAGAAATATCAAGATTAAAGAAAAGAATGGTGTAGGAATATTGCAAATTAAGCAGAGTTATTTTTAGCTTATAAAAACATGTCACCTTTATTTGGTCAAAACTCTTGCCTGGTCTTAAAGGGCAGTGTGCGTTCCAGGGAAATTCATGGACTTTTGTAGTGGTTATCTGGTTGATGCATCTGGAAATACTGATATTGATGGGAAAAAATGCTCCTCTTTTAAGTCGTTTTTTTTTCTTGGTGGGGGTGGTCCAGAAAACCTCTTACACGTATGAACACCGGTCAAAATTTTTGACTTCAACGAATGTTATATCTGGAATCATCAAGATTACTGATAAAAAATACCTGCAAGAAATATTAATGAAAAATCAAGGCGTATGCATACCGATTGCTAGATAGCGTTGCTTTGGTGCTCTCTACGGGTATTATTATACCACTAGTATTATTAGAGGTAAATTAATAACTAATATACTTTTTCATTTATGTTTTTTCTTGGCTAAATCGATCTATGATCACCCATTATGCTGGCATCGCTCATGTTTCATGAAAAAACAAAAAAGAAAAAAAGGTTTAGTCACTGCTAAATGATGATTATACCCCTTCGCACCCTTTTACATTTCTACTACTATTAACTAGGGTGGTTGTATAAATAGATCTGAACCCTTCGATCAAATGAGATCAATAGTTCGGATTATTTTCTAATACATGTAGAGAGCACCGTAACGAGGCTCTTGCTAGAAGTATTTAGCTGCTATTTATTTAGTGGACACATAAAACCTTTGCTCTCTGAAAAAACTTCACATGTGACTTCAGAAGCAGCATAAAGTTTACGGGCTTGTTCGGTTTGTAGGATTTTTCAAAATGTACGAATAGGAAAAGCATAAAATAGTATAAAAATACAAGTGCAAACCTAAGAATTGAAAAATATAGGAAACTTTACTATGGTTGTGTAGCAAACAATACAATGGATTGAAAACATTGGGTTGAAGTGGATTATATGTTTCTTTGTTTTCCCCATAAAAGTGGAGGGATAGAAAATTTTCATCTGGTGCATTCGTTTGAAACGAACGATAGTGCACTGTCCATTCCGAAGGACTATATATTACTGTACTTTTCCTTCGCAATAAGCCCTACGGTTGTGAGAACTCTTTTAGGCCAGTAGCAGTGCAAGCCACGCTTGGCGTGCCTTCAGCCTATTCCAACAATGATTTTGGACCAAAATTCATCTCTAGGTCACCCACCCCACAGTGCTGTACCCACGTCTTCCTCATCCTAATCCCCACGCCGCTTTTCTCGGCTTTTCATCCCCACACGCTGATTCTCGCCAGACCGCCTCTTTCCTCTCCCCTCTCCACCTCACCGACGGCGGTGGCGGCGTCCTCGATGGCGGAGGCGGCGCGGTGGCCTCGCTGGCGGAGGTCCTCGAGGCGGCGGCTCAGATCTGGACGGACGGCGACGCGGCGGCCCACACGGCGGCTCGGCCACCACCGACGTCGACGCGAAGCAGCTCCAACCGACGGCGATGCGGCGGCACACGTGGCGGCGGCAGCGGCTCGGTCGACGACGGCAACCTCGGCGGTTGCCTCGTCGTCCTCCGCAGATCTGGAGCGGCGCACGCGGTGGTGGTGGTGGTGGTCGTCGTCGTCGCCACCGACGCGCCGTCGTCGTCGCCGCCGACGCCGCGTCGTCGTTGCCCGCGGTGGCGCACGCCATCCCCGCCAGCCCGACTCTCCCTCTTCCCGGCGCGCCGCCTACCCCAACGTCGAGCGGCGGCGACATCCTCGGGACCTGGCGAAGAAGCGGCGGCGGCTGCGCAGATTTGGAGCGTCCTCGCCGTCCTCCTCAACGACGGCGGCGGCGCCGCGGATCTGAAGACGTGGCGGCGGTGGCGCGTCCTCGCCCCGCCCTCCTCACCGACGGCGGCGGTGGCGTGTCCTCGCCCCACCCTCTTCACCGGCGACGGTGGCGTGGATTGGAGCTGGCCTCGGAGTCGCGCGTTCTCGTCCTCGCATCTCTCATCAGTGGGCCCCGCGCTCTACTTTTTAAGCGAGGTTCTCGTTCCTTCGCTGGGAACCGAAGAAGCTATTGAAGCTATGGGACCCATAAACTTTTTTTTGCCAGCGAGGACGAAGGAACGCTCCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018050