BGIOSGA018505

From RiceWiki
Revision as of 16:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA018505

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018505, complete gene.

LocusTag

OsI_19030

Ensembl Transcript ID

BGIOSGA018505-TA

Ensembl Protein ID

BGIOSGA018505-PA

Length

6712

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9139990..9146701

Sequence Coding Region

9146579..9146701,9139990..9142344

Genome Context

<gbrowseImage1> name=IndicaChromosome05:9139990..9146701 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:9139990..9146701 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCCCCGGGCAGCATACGGTGGAGATAAGGAGGATGATATACCTGACGATCATGTCGAGCGTCGACTTCGAAGAAGCTGGCCACAAGCTTGCTGAAATCAAGCTCGAGCCTGCCCAAGAGAAAAAGAAGAAAAACAGAATGGCTGAGCCCAGGTTTCCTCCTCCTGAAACTCTGAAGATAGCATTGCTGTGCCTTCTCCTCCCCTTGTTCTCACCAGCCACAGCATCCATCCCTTCTGCTGCATCGACGTCGTCGGACCGGAGCTGCATCGCCGATGAGAGGGCCGCACTTCTCGCCATAAAGGCAACCTTCTTCGACCCGAACAGCCGCCTCGCATCATGGCAGGGCGAGGATTGTTGCAGCTGGTGGGGTGTCAGGTGCAGCAACAGAACCGGCCATGTCATCAAGCTGAGACTCCGTGGGAACACAGACGACTGTCTCAGCTTCTATGGAGACAAACTCAGAGGTGAGATGAGCTACTCTTTGGTCAGTTTGCAGAAATTGAGGTATCTAGACTTGAGTTGCAACAACTTCAATTGGTCACAGATACCGGTATTTCTTGGTTCTCTTCCAAGCCTTAGATATCTCAACCTTTCATATGGTTTCTTCTATGGAAGTGTACCCCCCCAGCTTGGCAACCTCTCCAAACTTGCCTACCTTGATCTGACCTCTTATTCATACAACCAGCTATACTCGGTTGCCCTTTCATGGCTGTCACACCTATCCTCACTGAAGCATCTGGTCATGAACCATGTGAACCTTACCACTGCAGTAGATTGGGTTGATGAAATCAACATGCTTCCTGCTCTGAAAGTACTCTACCTGAAACAGTGTGGGCTGAGGAAAACAGTTCCTTTCCTTCGTCGGTCCAATATCACGGGGCTCGAAGTGCTTGACATCTCGGGAAATAGATTTCACACCAAGATTGCTCCTAACTGGTTTTGGAATATAACTAGTCTCTCTGCTCTTGATATCCGATCGTGTGGTTTCTTTGGCTCAATTCCAGATGAAATAGGCAGGATGGCCTCTCTTGAAGAAGTCTATTTCCAAGGGAACAATCTCATGTCAACCATGATACCCTCAAGTTTCAAAAATCTATGCAACCTGAAGGTGCTGGATCTACGAAGTACCAATACTACAGGGGATATCAGAGAATTGATAGAAAAGTTGCCAAACTGTCACTGGAACAAGCTGCAACAGTTGGGTTTATCTTATAATAATATTGGTGGAACCCTGCCAAATTGGTCAGAACCTCTGGCCAACTTAACTGTCTTGCTTCTCTCCAATACTAACATCTCAGGAGCTATGCCATCGTCGATATGGGCTCTCACAAAACTGAACATTTTGGATCTTTGTTCCAATAAGCTCAATGGCACAGTCAGGGAAGATCAATTAGGAAACCTTACAAATCTAGTGTACTTAGGGTTGGGCAATACACATCTACAGATTAAAGCCAGCTCAGATTGGATTCCTCCATTCAAACTGCAGGTAGTTCTCTTCTATTCTTTGCAGCTAGGGTCAGAAGTCCCACCATGGCTTAGATCACAAACAAGCATTCAACACCTTCAAATTGCAAACACAAGCATTACTACAATCCCAGATTGGTTTTGGATTGTGTTTTCAAGAGCAGATTTTTTGGATGTGGCATATAATCAGATAACGGGAACGCTACCAGCAACGTTGGAGTTTATGGCAGCAAAAACCATGGATCTGTCCAACAACAGATTTACTGGTATGGTTCCAAAATTTCCAATAAATGTAACATACATGTACTTGCAACGGAACTCATTATCAGGACCACTGCCATCAGATTTCGGAGCCCCGTTGTTACAGTCACTTACTCTCTATGGCAATTTAATATCAGGCACCATTCCATCTTCACTGTTCTCACTGGAACACTTGGAAATATTAGATCTATCTGGAAATAAACTTAGTGGCGAAGTTCCAACTTATCAAGAAGATTCAAATCCACGCACACGACAACTCATTGTCGTAAACTTAAATAGTAACAACCTCTCTGGAGAATTCCCATTGATTTTCAGAAGTTGCCCGCGCCTAGTTTTTCTTGATCTATCCTATAATCAGTTTTCTGGAAATTTACCACTGTGGATGGGAAAGAAGTTTCTGCCAATTTTATCATTGTTGCGTCTACGGTCAAATATGTTTTCGGGACACATTCCCACAGAACTTACAAGGATTGATCAATTACAGTTCTTAGACCTCGCTGAAAACTACTTCTCTGGAAGCATACCTGACTCTTTGGTTAACTTGAGTGCAATGGCTCGCACATCTGGATACAGTGTTCTTCTAGATGAAGTCATCGCAACTGGTCAAGGTGCAATGTATGATATAAATTATTTCTATGAACTGGTATCAGTTCAAACAAAAGGGCAGCAACTTGAATTTTCAAGAGGAATTTCACGTGTGGTGAACCTCGACTTGTCGAAGAACAAGTTTACTGGAGCAATCCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MIPGQHTVEIRRMIYLTIMSSVDFEEAGHKLAEIKLEPAQEKKKKNRMAEPRFPPPETLKIALLCLLLPLFSPATASIPSAASTSSDRSCIADERAALLAIKATFFDPNSRLASWQGEDCCSWWGVRCSNRTGHVIKLRLRGNTDDCLSFYGDKLRGEMSYSLVSLQKLRYLDLSCNNFNWSQIPVFLGSLPSLRYLNLSYGFFYGSVPPQLGNLSKLAYLDLTSYSYNQLYSVALSWLSHLSSLKHLVMNHVNLTTAVDWVDEINMLPALKVLYLKQCGLRKTVPFLRRSNITGLEVLDISGNRFHTKIAPNWFWNITSLSALDIRSCGFFGSIPDEIGRMASLEEVYFQGNNLMSTMIPSSFKNLCNLKVLDLRSTNTTGDIRELIEKLPNCHWNKLQQLGLSYNNIGGTLPNWSEPLANLTVLLLSNTNISGAMPSSIWALTKLNILDLCSNKLNGTVREDQLGNLTNLVYLGLGNTHLQIKASSDWIPPFKLQVVLFYSLQLGSEVPPWLRSQTSIQHLQIANTSITTIPDWFWIVFSRADFLDVAYNQITGTLPATLEFMAAKTMDLSNNRFTGMVPKFPINVTYMYLQRNSLSGPLPSDFGAPLLQSLTLYGNLISGTIPSSLFSLEHLEILDLSGNKLSGEVPTYQEDSNPRTRQLIVVNLNSNNLSGEFPLIFRSCPRLVFLDLSYNQFSGNLPLWMGKKFLPILSLLRLRSNMFSGHIPTELTRIDQLQFLDLAENYFSGSIPDSLVNLSAMARTSGYSVLLDEVIATGQGAMYDINYFYELVSVQTKGQQLEFSRGISRVVNLDLSKNKFTGAIP</aaseq>

Gene Sequence

<dnaseqindica>1..123#4358..6712#ATGATCCCCGGGCAGCATACGGTGGAGATAAGGAGGATGATATACCTGACGATCATGTCGAGCGTCGACTTCGAAGAAGCTGGCCACAAGCTTGCTGAAATCAAGCTCGAGCCTGCCCAAGAGGTAGCAACTGCACTTTGGTTCACTCGTTTCTTCTTTAATTATTAGAATTGTCCTTCAGTTTTTATTATGGTAACTAGCAGATTGCGCGGCAAACATCATTATATTTTCTCTCATATAATAGTATATATGTTTTCTCAATATATTATTCAAATTTTTTATAATGACATCAAAATTTTAAATTTTGCAATAACTTTACGAAACTACAAATGTGTAATATTCATATTGTATTTTATATACGTGTTAGTTATTAATTATTTTTAATATCAAATTTTAGTTATTTGTAAATTATATATATTCCTATATGTACTCTAGACTTGTGCTTTTATTTTTTTTTTGAATTCTGAATTTTCTATAAATTGTATTTCTATATAGACTCTAGGCTCTTCTTCCAATATTATTTATTTTTATTTGCTGATTTTTTATTATTTCTAATTATATTTCTACGCGGACTCTAAACTCATCTCTCAATATTCTTGAATTGCAAATTGTGAATTTCAGTTACTTCTAAATTGTATTCCTATATTGACTTTAGACTCTTCTTCCCATGTTTTTCTTAATTTTGAATTTTAGTTATTTGTAAATTGTATTTTTATACGGACTCAAAACTCTACTTCTACTTTTAATTTTGTTATGTTTATTCCGAAGTTTAGTTAGTTTTAAATTCCTATATGGACTCTATACTCTACTTCTAATATTTCTTATTTTTAATTCCGAATTTCAGTTATTTTCTAATGTATTTCTATATGGACTCTAGTGTCCTCTTCTAATATTCCTTATTTTTTAATTCCGAATTTCAACTATTTCTAAATTGTATTTCTATATGGACTCTAGTCTCCTCTTCTAATATTTCTTATTTTTTAATTCCGAATTTCAGCTATTTCTAAATTGTATTTCAATATGGACTATGATTTTTCTTTTTCTTCGATTAATGTGAGAATTTCTAAGCCATGAGAGCGAACGTGGAGACTCCTTTTTCTATTCCTTTAATAATATAATAGATTTTGTTAATTTCCTTATTAGAAAAACAATAGCCTTGAGCCAATTAACAAAGACAATTCTAATAATTAAAGTTTAGCTCAAGGCCTAGCGCAAAGAGAAGCTTAGGGTAGCTAGGCCTTGAGCTAGATTTGTCTACTAAACTAGATAGAACCCCGCGCGTTGTTGTGGGATTTTGTGTACAGTAATATATTATGATCAAATAAAAATATACTCCAAAGAGAAGTCTGAAATTATAGTTAAAAACTTTATAAACTCTGTTGTCTAGTAGTACTAAATTATGAAGATGTATATATTTTCTTTTCTAAGAAACATGTTCCTAGATGTGTGTGTCTATATATTTCAACCGATGGTAAGACAAAAGAAGATATCAAACTCCAAGGGTCGGTGAGTAATGATGGGACGGTGGTACTCATAACAATAGAACGGATATGTACTTTGTCAACTAAAGCTCAATCGTTGTCATTAAGGAGGCCAGGCTCTTCAATCGTTTAGTTGATTTGTGGATGGCGATTAAGGAGGGTTGTTCAATCCTACTTCATGCATGCATGTTGATGAAACGCCCGGCTAGCAAAATTGTGGCATCGAATGCATTGAGTGCATGATGGAAGGAATAACTAAATGCAAGCTACAAAACGTATCACACTCAAAAGTAAATCTGAGCTGTCCAAGATAATCCAATGGTGAATAGTGAAATGGCTTTGAGATAATCTGGAATGTTGGATTTCAATCTAATGGCTAAAAAGAATTAAGGTGATGTAGAAGCACCACAAGTGAGAAAAATACTAATAACTACACTTAGTGGGGATCAACTATATATATTATATAGATATAGATTACTATTAGATTCTCTCAAAACTCAGTGAAAATTTTGAAAAAGAAATTAAAACAAAAGATATAAACAAGTTCAACCCCCCCCCCCTATGGAGATGGATTCGAATCACTCGGGTGGACGTCCACAGTTCCCCCCTACTCTTGAAGATTTCTTGCTCTGTGCCTGATAGCCTAGTTTCTCAAAATTGATACTGTACTACTACCTCCGTTTCAGGTTATAAGACTTTCTAGCATTGCCCATATTCATATAGATGTTAATGAATCTAGGCACACATATATGTCTAGATTCATTATCATATATATGAATGCGGGCAATGCTAGAAAGCCTTATAATATGAAACGGAGGAAGTACTAGTTAGTTAGTACTTGGTCATTAAAACACTATTGATATTTCAGTGCGTGGATACATATCAGAACAATTTTGTGGTGATACTAATGCATGATTTCACGAACCATTTGGGAAGCCAGCTCCTGAACCCCAGATGATAATTTGTCAATGGAAAAAATAGTGAACCAAGTTGTTAGTAATAATTGTTAAGTAACAATACTAAATACTAGTACTAACTACGTGGGCATTAGGCATTTCAGGTTCAATTGACTTATTTAAATTATCAGGTAGCTGATTGATTTCTTTGGTCCTTCAGTGCTGAAATTTGCATGATATGGTTTTTCCCCTATGCATGCTAACTGTTGCATGTTTCATTTCTCAGATGGAATTATGCATTATGCTCCTCGAGTGTTGCTCTCAAGAGAGAACCTACCTTCCATATTACGGATTACTAGCACAAAGATTGTGCCTAATCAACAAAGTTTACCAAAAAAACTTCGAGAAATGTTTTGCGAAACAATATTCGATGATCGATCGTCTCGACACAAATAAGCTGGGGAATGTTGCCAACTTTTTCGCGCATTTGTTGGCCACCGACGCGCTTCCATGGCATGTTTTGGCCTACATCCGTTTGACAGAGGAGGATACCACGTCGTCTTCAAGAATTTTCATAAAAATACTGTTCCATGAGTTATCAGATCACCTTGGAATTCGCCAACTCAATAAGAGACTGAGCGATCCTAAAATGAAAGATTATTTTGATTCAATCTTTCTAATGGATCATCCGAAGAACACAAGATTCTGGATCAATTTCTTCACCTCCATCGGTCTTGGTGGTATCACTGAGACGCTGAGAGAGTACCAATGCCTGCAATGCAACAACAGAAGTCAGAATCAAGTTCTGATGAGAGTGGCAGAAACCCAAGTAAGAGAAGGAAGATGTAAAGAGACGGATGGAAGAAGAGCTCCATGAAAATTCAACTGTGCTTATGGGGGATGCAACTGTCGTCACAATCGGCATCGTCAGATTTGTTCAGTGCGATTGTTTTGTTGGATCAATCTTCCTCTATCTGTATCCATGTGTAATATCAGATGATGTTTGTTGCTTATCGAATTCAGGAAACCAGCCATAGCAGATGTTTTCTGCAGTGCAAGTTTTGTGCCTTCATAACCGGTTTATTATTGTTTATAGGTTTGACAACAGTGATGAAGAAATAATTTTAAGGATAAAATGCTATAACAGGCAGCAGCTAAGCAGGATTAAAAATGATGTACCTTTTTTATGTGAAATATGATTTACCTTTTTGTAGATGAAATATTATGATATACATTGGAAACACACGTAGGTTTCACTTAAGGTATAAACTTTTGCACCCTCTTGTTATATTTCTCGTCTACATAGATAAGTGGAGGAAATGAATGGTAAGAAAATTAAATCCAGCAGGAAAATAACATCAAACATGTGTACAAAATAACAGACAAGATTTCACAGAATTCAACTTTGGTTGATCTAGAATCCCCTTTCAGGCCACTCAGTTGCTGCTCCCTGTCAGACATGGCATCATATGTGGCAAGTCATGGTAAAAGCGTGGAAACCCATCTACAGCCGTTGTGCTTGGCGTCTGACCAGGAACAGCCACAGAAAATATGCCCCAATTTGCAAGCACAAATCACACCGTCTTCAGTAGGGCAGACTATCAGTAGCTCCTGCTGACTTTCACACTGGAAATGAGCAGCAGATCACCCACATCTGAGTTCTTACAATACCAGGCGTGAGGTCGAAATGCAAGCAAAAACTTGTTGCTTTTGTTGACTAGTAAGATTTCATTGCCGTATGACCGGGTGCAGGGGAATTCCATGAAGAGGACGCAAATATCACATTCAAATCAACTGGACCAGACACTTCATCATGACTCGAATGACAGAGATAACATAATACTACTGCCAAAAAGAAAAAAGGAAAAGAGGATCAGTATTTTCTTCTAACAGTAGTCACTATATAACATGATCCGAAGTGTCATTCATGAGCAAATATATATTTTTGCATATTACATTTGCATCCATTCATTCACACAGAAAAAGAAGAAAAACAGAATGGCTGAGCCCAGGTTTCCTCCTCCTGAAACTCTGAAGATAGCATTGCTGTGCCTTCTCCTCCCCTTGTTCTCACCAGCCACAGCATCCATCCCTTCTGCTGCATCGACGTCGTCGGACCGGAGCTGCATCGCCGATGAGAGGGCCGCACTTCTCGCCATAAAGGCAACCTTCTTCGACCCGAACAGCCGCCTCGCATCATGGCAGGGCGAGGATTGTTGCAGCTGGTGGGGTGTCAGGTGCAGCAACAGAACCGGCCATGTCATCAAGCTGAGACTCCGTGGGAACACAGACGACTGTCTCAGCTTCTATGGAGACAAACTCAGAGGTGAGATGAGCTACTCTTTGGTCAGTTTGCAGAAATTGAGGTATCTAGACTTGAGTTGCAACAACTTCAATTGGTCACAGATACCGGTATTTCTTGGTTCTCTTCCAAGCCTTAGATATCTCAACCTTTCATATGGTTTCTTCTATGGAAGTGTACCCCCCCAGCTTGGCAACCTCTCCAAACTTGCCTACCTTGATCTGACCTCTTATTCATACAACCAGCTATACTCGGTTGCCCTTTCATGGCTGTCACACCTATCCTCACTGAAGCATCTGGTCATGAACCATGTGAACCTTACCACTGCAGTAGATTGGGTTGATGAAATCAACATGCTTCCTGCTCTGAAAGTACTCTACCTGAAACAGTGTGGGCTGAGGAAAACAGTTCCTTTCCTTCGTCGGTCCAATATCACGGGGCTCGAAGTGCTTGACATCTCGGGAAATAGATTTCACACCAAGATTGCTCCTAACTGGTTTTGGAATATAACTAGTCTCTCTGCTCTTGATATCCGATCGTGTGGTTTCTTTGGCTCAATTCCAGATGAAATAGGCAGGATGGCCTCTCTTGAAGAAGTCTATTTCCAAGGGAACAATCTCATGTCAACCATGATACCCTCAAGTTTCAAAAATCTATGCAACCTGAAGGTGCTGGATCTACGAAGTACCAATACTACAGGGGATATCAGAGAATTGATAGAAAAGTTGCCAAACTGTCACTGGAACAAGCTGCAACAGTTGGGTTTATCTTATAATAATATTGGTGGAACCCTGCCAAATTGGTCAGAACCTCTGGCCAACTTAACTGTCTTGCTTCTCTCCAATACTAACATCTCAGGAGCTATGCCATCGTCGATATGGGCTCTCACAAAACTGAACATTTTGGATCTTTGTTCCAATAAGCTCAATGGCACAGTCAGGGAAGATCAATTAGGAAACCTTACAAATCTAGTGTACTTAGGGTTGGGCAATACACATCTACAGATTAAAGCCAGCTCAGATTGGATTCCTCCATTCAAACTGCAGGTAGTTCTCTTCTATTCTTTGCAGCTAGGGTCAGAAGTCCCACCATGGCTTAGATCACAAACAAGCATTCAACACCTTCAAATTGCAAACACAAGCATTACTACAATCCCAGATTGGTTTTGGATTGTGTTTTCAAGAGCAGATTTTTTGGATGTGGCATATAATCAGATAACGGGAACGCTACCAGCAACGTTGGAGTTTATGGCAGCAAAAACCATGGATCTGTCCAACAACAGATTTACTGGTATGGTTCCAAAATTTCCAATAAATGTAACATACATGTACTTGCAACGGAACTCATTATCAGGACCACTGCCATCAGATTTCGGAGCCCCGTTGTTACAGTCACTTACTCTCTATGGCAATTTAATATCAGGCACCATTCCATCTTCACTGTTCTCACTGGAACACTTGGAAATATTAGATCTATCTGGAAATAAACTTAGTGGCGAAGTTCCAACTTATCAAGAAGATTCAAATCCACGCACACGACAACTCATTGTCGTAAACTTAAATAGTAACAACCTCTCTGGAGAATTCCCATTGATTTTCAGAAGTTGCCCGCGCCTAGTTTTTCTTGATCTATCCTATAATCAGTTTTCTGGAAATTTACCACTGTGGATGGGAAAGAAGTTTCTGCCAATTTTATCATTGTTGCGTCTACGGTCAAATATGTTTTCGGGACACATTCCCACAGAACTTACAAGGATTGATCAATTACAGTTCTTAGACCTCGCTGAAAACTACTTCTCTGGAAGCATACCTGACTCTTTGGTTAACTTGAGTGCAATGGCTCGCACATCTGGATACAGTGTTCTTCTAGATGAAGTCATCGCAACTGGTCAAGGTGCAATGTATGATATAAATTATTTCTATGAACTGGTATCAGTTCAAACAAAAGGGCAGCAACTTGAATTTTCAAGAGGAATTTCACGTGTGGTGAACCTCGACTTGTCGAAGAACAAGTTTACTGGAGCAATCCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018505