BGIOSGA020087

From RiceWiki
Revision as of 16:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020087

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020087, complete gene.

LocusTag

OJ1119_H02.18

Ensembl Transcript ID

BGIOSGA020087-TA

Ensembl Protein ID

BGIOSGA020087-PA

Length

2365

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25513015..25515379

Sequence Coding Region

25513015..25513851,25514150..25514221,25515299..25515379

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25513015..25515379 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25513015..25515379 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCGCATGCTGGAGGTAGTGGCGGTGGCGGCGGTGGAAGTGGCCGGGATGCCGGCTCGGCGCAGCGTGGGTCGATGCAGGGGTTGGCGAGGCAAGGGTCGCTGTATGGGCTTACACTCAATGAGGTTCAGAGCCAGTTGGGGGAGCCATTGCTTAGTATGAACCTTGATGAGCTGCTTAAAAGCGTGTTTCCTGATGGCGTGGACCTTGACGGTGGCGGTGGCGGCATCGCGGGTCAGTCTCAGCCGGCCCTGGGGCTGCAGCGCCAGGGGAGCATCACGATGCCTCCGGAGCTGAGCAAGAAGACGGTGGATGAGGTGTGGAAGGGCATCCAGGATGTGCCGAAGAGGGGTGCTGAGGAGGGTGGCCGGCGGAGGCGGGAGAGGCAGCCGACCCTGGGGGAGATGACGCTTGAGGATTTCCTGGTCAAAGCTGGGGTTGTCACGGATCCGAACGATTTGCCAGGAAACATGGATGTGGTAGGGGGCGCTGCTGCGGCTGCAGCTGGTACGTCTGATTTGAACGCTGGAGCACAGTGGCTACAGCAGTATCACCAGCAGGCTTTGGAGCCCCAGCATCCAAGCATAGGTGCTCCTTACATGGCAACTCACCTGGCACCTCAGCCATTAGCTGTTGCTACAGGTGCTGTTTTGGATCCAATTTACTCCGATGGCCAGATCACTTCGCCAATGCTCGGGGCTCTTTCTGATCCTCAGACACCTGGGCGCAAACGCGGTGCCACAGGGGAGATTGCAGATAAGCTAGTAGAAAGAAGGCAGAAGAGGATGATAAAAAACAGGGAATCAGCTGCCAGGTCAAGAGCGAGGAAGCAGGCTTACACTAATGAGCTTGAAAACAAAGTTCTTCGACTAGAAGAGGAGAATGAGAGGCTAAAGAAGCAGAAGGAGTTGGATGAGATACTGAACGCCGCGCCTCCCCCGGAACCCAAGTATCAACTTAGGCGAACAAGCTCGGCCGCCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MASHAGGSGGGGGGSGRDAGSAQRGSMQGLARQGSLYGLTLNEVQSQLGEPLLSMNLDELLKSVFPDGVDLDGGGGGIAGQSQPALGLQRQGSITMPPELSKKTVDEVWKGIQDVPKRGAEEGGRRRRERQPTLGEMTLEDFLVKAGVVTDPNDLPGNMDVVGGAAAAAAGTSDLNAGAQWLQQYHQQALEPQHPSIGAPYMATHLAPQPLAVATGAVLDPIYSDGQITSPMLGALSDPQTPGRKRGATGEIADKLVERRQKRMIKNRESAARSRARKQAYTNELENKVLRLEEENERLKKQKELDEILNAAPPPEPKYQLRRTSSAAF</aaseq>

Gene Sequence

<dnaseqindica>1..837#1136..1207#2285..2365#ATGGCTTCGCATGCTGGAGGTAGTGGCGGTGGCGGCGGTGGAAGTGGCCGGGATGCCGGCTCGGCGCAGCGTGGGTCGATGCAGGGGTTGGCGAGGCAAGGGTCGCTGTATGGGCTTACACTCAATGAGGTTCAGAGCCAGTTGGGGGAGCCATTGCTTAGTATGAACCTTGATGAGCTGCTTAAAAGCGTGTTTCCTGATGGCGTGGACCTTGACGGTGGCGGTGGCGGCATCGCGGGTCAGTCTCAGCCGGCCCTGGGGCTGCAGCGCCAGGGGAGCATCACGATGCCTCCGGAGCTGAGCAAGAAGACGGTGGATGAGGTGTGGAAGGGCATCCAGGATGTGCCGAAGAGGGGTGCTGAGGAGGGTGGCCGGCGGAGGCGGGAGAGGCAGCCGACCCTGGGGGAGATGACGCTTGAGGATTTCCTGGTCAAAGCTGGGGTTGTCACGGATCCGAACGATTTGCCAGGAAACATGGATGTGGTAGGGGGCGCTGCTGCGGCTGCAGCTGGTACGTCTGATTTGAACGCTGGAGCACAGTGGCTACAGCAGTATCACCAGCAGGCTTTGGAGCCCCAGCATCCAAGCATAGGTGCTCCTTACATGGCAACTCACCTGGCACCTCAGCCATTAGCTGTTGCTACAGGTGCTGTTTTGGATCCAATTTACTCCGATGGCCAGATCACTTCGCCAATGCTCGGGGCTCTTTCTGATCCTCAGACACCTGGGCGCAAACGCGGTGCCACAGGGGAGATTGCAGATAAGCTAGTAGAAAGAAGGCAGAAGAGGATGATAAAAAACAGGGAATCAGCTGCCAGGTCAAGAGCGAGGAAGCAGGTATGATCCATAATCCTTCCTACTTAGAATTTTCTATATATTGCATGCTCTTACTTTGCTTATTATAATTTACTGCTTTCAAACATAAAGGCCTAATGGATTCTTTTTTTAATCTCTGGATGTATTAAGTTGGCATTTCTCTTACTCATACAGTATTTAGTCTAATATATCAAGATATATGTTATATCTTTCCAAAGCTGTAAGAACATACCAGTGCAGTAGCATTGGAATGCCATTTTCCCCTTCTTTTATGGACCATGTATATTTATTTCACCGCTGTGTGCATTCTAACTGGCAGGCTTACACTAATGAGCTTGAAAACAAAGTTCTTCGACTAGAAGAGGAGAATGAGAGGCTAAAGAAGCAGAAGGTACTTTCTCTGCTGTTATCATTGTACTGTTTCTATTTTGTCATTCCTTTAGACAAATGATATTCAACTAAGGACTACTCCCTGTGTTACTATGTTGATATGGCTTTGAAATACTGTTGTTGCACAGTCGACAATTCCTGTTTTATTTTATCTAGTTATTTTTTCTCTCGCTATCCACTTGCCACAGTTGTTACACCAACAAGTCCAAAGTGGTAACAGATAACTAGATAAGTGCTATATACTTTTGTAATTGTGTTAGTAACTTCTATTTGATCTGTTTACTTAAGGATTATGCTATATTCTCCTTATAAATGGCAAATGTACCAGATGTAGTTACTACTATATTTGAACTATGAAACAATCAAATGAGGCTTTGACTTTGACTTGCTATATATGCAAGTGCCTTTGACTTTCTAAGGAGACCTATATGAAGTTCTCGAGGATTTTAATCAACTTATCATGCTACATTATACTCCTATATATCAGCATTAAATATGTGAAACACTAGTATTGTCATCACCAATTTTGCGCATCATTGCAATCTTTTAAAGCTTAAATTTTAAATGTTGCAATGTTGCATACATTAAATCACTGAACACATAGGTGGGCCTCCTTTTTTTTGGTTGCCTTTTATTTATCAATCATCATGGTAATGATTTATCAACCAAACATGCCTTTTCTAAGATTTTTGCATATGAAACTACTGTGTATATCTGTAGAGCTTTACAGGTTATACATGTGCTGCAATTCCATAGTAATTCACCAAGATGCTTGATTCCCATGCCCTTAACTTTGGGCCTTTTCCCCTTGAACAGAGACTTGATGCTGAACAAAGTCACAAACATCTCTCTGTACTATTAGCATAATAGAATTGATGGCCCGTTGATATTTGACAAACGGTTTTATGACATTCCATTATAGTATTTCTTACAGTTTAGAAACGAAGTGAATCATGCTGCCCTTGTTCTTGAGATTGGGTAAGCAAGACCGGCAATGCCATTTAGCTTATAGCATCTTGTTACTGTTCATTCATGTTGATGTCCCTTATGAGATGATTTTGTCCCCCGCTGTTTCCAGGAGTTGGATGAGATACTGAACGCCGCGCCTCCCCCGGAACCCAAGTATCAACTTAGGCGAACAAGCTCGGCCGCCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020087