Os12g0104400

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os12g0104400

Description

Fatty acid acyl-CoA desaturase family protein

Version

NM_001072458.1 GI:115486877 GeneID:4351253

Length

3946 bp

Definition

Oryza sativa Japonica Group Os12g0104400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:225239..229184

Sequence Coding Region

225670..225870,225989..226126,226315..226392,226523..226708,226853..226945
,227797..227863,228458..228547,228660..228964

Expression

GEO Profiles:Os12g0104400

Genome Context

<gbrowseImage1> name=NC_008405:225239..229184 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:225239..229184 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtcggcgacccaggaggcggactgcaaggcttccgaggacgcccgtctcttcttcgacgccgccaagcccccgcccttccgcatcggcgacgtccgcgccgccatccccgcccactgctggcgcaagacccccctccgctccctctcctacgtcgcccgcgacctcctcatcgtcgccgccctcttcgccgcagccgccactcggattgacgtctccgtcgcctgggcggcctggccgctctactgggcggcgcagggcaccatgttctgggcgctcttcgtcctcggccacgactgtgggcacgggagcttctccgacagcgccatgctcaacaacgtcgtcggccacctcctgcactccttcatcctcgtcccctaccatggatggagaatcagccacagaacacaccatcagaaccacggtcatatcgagaaggacgagtcctggcacccgatcaccgagaaattgtaccggaagctggagacgcgcaccaagaaactgcgctttacattaccatttccattgcttgccttccctgtctacctctggtacagaagtccgggcaagaccggatctcactttctgccgagcagcgatctgttcagccccaaggagaagagtgacgtgattgtctccaccacctgctggtgcatcatgatttcgttgctcgtcgccttggcgtgcgtgtttgggtctgttccggtgctcatgctatacggtgtcccatatcttgtattcgtgatgtggcttgatttggtgacttatctgcaccaccacggtcacaatgaccttccctggtatcgtggagaggaatggagctacctccgcggtggcctgacaacggtggatcgggactacgggtggatcaacaacatccaccatgacattggcacccatgtcatccaccaccttttcccccaaattcctcattatcacctcgtagaagcaacaaaggcagcaaggccagtgctgggcagatactacagggagccagagaagtcaggtccgctgccacttcacctgtttggcgttctgctgaggagcttgagagttgatcactttgtcagcgacgtcggggatgttgtttactaccaaacagatcacagcttgaacggcactgactgggccgaagatgctaagcacaagtga</cdnaseq>

Protein Sequence

<aaseq>MAASATQEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWR KTPLRSLSYVARDLLIVAALFAAAATRIDVSVAWAAWPLYWAAQGTMFWALFVLGHDC GHGSFSDSAMLNNVVGHLLHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLY RKLETRTKKLRFTLPFPLLAFPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTC WCIMISLLVALACVFGSVPVLMLYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWS YLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATKAARPVLGRYYREP EKSGPLPLHLFGVLLRSLRVDHFVSDVGDVVYYQTDHSLNGTDWAEDAKHK</aaseq>

Gene Sequence

<dnaseqindica>3315..3515#3059..3196#2793..2870#2477..2662#2240..2332#1322..1388#638..727#221..525#gaaggcaacacaggaggaggaggagcttggtttctgggttgggttgggtttggttgcgttgcggcccatccatcgcattcgcgttcgcaggcacaaaccaaacacctcccctcaaatttctctttcttgtctcttctccctttccgcctcgcctcgcctcgctgcctgcgcttcacaaatcacaaatcggaatcagatccaccacgacacggcggcggcaatggcggcgtcggcgacccaggaggcggactgcaaggcttccgaggacgcccgtctcttcttcgacgccgccaagcccccgcccttccgcatcggcgacgtccgcgccgccatccccgcccactgctggcgcaagacccccctccgctccctctcctacgtcgcccgcgacctcctcatcgtcgccgccctcttcgccgcagccgccactcggattgacgtctccgtcgcctgggcggcctggccgctctactgggcggcgcagggcaccatgttctgggcgctcttcgtcctcggccacgactggtaatttctattcattcattcatcgcttccatttcttttctcatatatgcatatatgcatcaatccatcgagatctccatgaaaaacaaattgaaaatgcatgcaaacacagtgggcacgggagcttctccgacagcgccatgctcaacaacgtcgtcggccacctcctgcactccttcatcctcgtcccctaccatggatggtaccaactcctcctatactctctctctctctctctctctctctatagcatacatgcatgtatatcaattttcaaaatcacacgagttgcatgcacaaacagaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttcacctacctacttctattgcacacctaccaaattaatgctctgaaaccagttaattagttagaaactaaaaagtttttgctttaccacacgcgcggcacacggcaaaagcatagatgcaggcaaagcaagttgaaaaaacagcacatattcgggtctccatcctatatacgtggaactagcctgtcctgtcaaatccagaatctcttcacatgatactgtatgtgcaattaggcaatgctagtcttggtttaccatagcatcttggaccatcactgctatggtaattcatctcgttgacccatccgatctgagcatctgactgatattattaatgtcatatgcaggagaatcagccacagaacacaccatcagaaccacggtcatatcgagaaggacgagtcctggcacccggtttgtcactccttcagatcacctcctctcttactaatttcttctcatctctcgcccatcctacaattgcttgcacttctcaacttcattccactcctagtactatccttaattatgcttgtctcaatccatcgcccgtacaacaattacaacccttttgaaaaagatacaccaattacatttgcttaattcgcggtactactactatcatatatagtaccaaaactgtatatatgactttcgcaaatatactccgtattcttcgctagcgtgtccaactggggcgtttggcaggacgggaaaggacaggacagccaaacgaacagtaagtattatgcgacatgctcacctgcaattgcattaataataatgcagatggagagaagggcacatgaccactgcagcagaccacaacgatccaccctgcttgttgcaaaatatcagccttcctttgtggtccgtgaatagtaataccaacaagattgagacagtagatctggctcacgtgcctttgctgctaaattattcaccagggatcccagatgcgaatcggatcactttttgatccgtagctcagcgtcagatcgaatatcatattacacatcacgtgatttgattcataacatatatatatatatatatatatgctaattaagttgtaggttcatttgaataaggccgccagggtagcataagcatctgctcagctttattgactgaataagaaaataacgagaggctgaatgagttttttgcttgtcacctgtatataagctggctctcaacatatagatacgtactctataatctgcttaaatttttatatatgcttttgcaatttgtttgagcagatcaccgagaaattgtaccggaagctggagacgcgcaccaagaaactgcgctttacattaccatttccattgcttgccttccctgtctacctcgtaagtctctgaatgtcctcctcacccggcaactccacgcaattgtgctgaatgaatgactcaactgaaaccgaactgaatctgtatccccaaaagaaagaaagacaactgaatcttctatacggatgcttgaatgtgctgcagtggtacagaagtccgggcaagaccggatctcactttctgccgagcagcgatctgttcagccccaaggagaagagtgacgtgattgtctccaccacctgctggtgcatcatgatttcgttgctcgtcgccttggcgtgcgtgtttgggtctgttccggtgctcatgctatacggtgtcccatatcttgtaagatacactattcactattaatcctctgcttttgcttctaagaaactccatcatatttatgggatatctaactgaaactgtacccaaaagctagatatctgatatgcgttgtctgcattcaaaacaggtattcgtgatgtggcttgatttggtgacttatctgcaccaccacggtcacaatgaccttccctggtatcgtggagaggtatatcttttttctgtattgattggatcatagtttttccagaataaagcatgaaaagttgctgtaggttattgagttgggtgcagcctatgagcactctatacttcctctcactctatacttcattaagttctgcttacaaacactgaaaatagggctgaacatctggcaatgaccactatttgcaggaatggagctacctccgcggtggcctgacaacggtggatcgggactacgggtggatcaacaacatccaccatgacattggcacccatgtcatccaccaccttttcccccaaattcctcattatcacctcgtagaagcagtaagtacactgccagcattattcacctctgctagatagtatgtatgtacggtgcactgttaccaagttcactgagtactgaaacaattgccttgttttgatgggaacaaaaaaacagacaaaggcagcaaggccagtgctgggcagatactacagggagccagagaagtcaggtccgctgccacttcacctgtttggcgttctgctgaggagcttgagagttgatcactttgtcagcgacgtcggggatgttgtttactaccaaacagatcacagcttgaacggcactgactgggccgaagatgctaagcacaagtgaaaaattaacttgaaaattattggagtcaccgtgtactagtagcttagtaagtgaagaatggattgttttcctgatagatagcatatccatcatagcatgaactgctgaaagaaagagaaataataagcagcaagggctacttacctgctcaaaagcatgcggccctgcagaacacagggattcattgatctgttggatcaccatattcagatcactaaacaagcattgtccaattgttgttgtagctagcgggtcgttcagttttgattagttctgaaagtgtccaagttataccgtgtaaccctttggagtttgccaggcaattcaatgtctggagtttgtatgtgccattgagcagacaattatgatccgaattaagctctgcaccttaatttttccatactgaatcactcacaatggagtttatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0104400, RefSeq:Os12g0104400