Os12g0106600
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os12g0106600 |
|---|---|
| Description |
Multi antimicrobial extrusion protein MatE family protein |
| Version |
NM_001072473.1 GI:115486907 GeneID:4351269 |
| Length |
4301 bp |
| Definition |
Oryza sativa Japonica Group Os12g0106600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:349772..354072 |
| Sequence Coding Region |
349774..350173,350512..350659,350734..350905,351527..351662,352110..352206 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:349772..354072 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:349772..354072 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>tccacagtcacacgctcgcgcggcatgacggcgacctcgccgccgatgaggtctgtcgccgccgccgcgcttgtcctaacccccactccaacgctcaaccgtctctcctttcccttcgcccaccgtcactgccctagtactgctgctcctcggtggaggcccgcgcggtgccgcgggaagccggcggtggaggacgtggtacacgacgacgaggaggagacctggcggcgggaggccaaccccgagaggaaggatggaggagaggagatgctcgggcgcgggtggttcatggttgatgagattggtatggaaatcctcaccatcgccttgcctgctgtgctcgccctcgccgccgaccccatcacggcgctcatcgacaccgccttcgttggccatgtcggttcaactgaacttgctgccgttggagtatccatttctatcttcaatttggtatccaagctgctcaatgtcccattgctcaacgtcaccacatcctttgttgccgagcagcaggcagtggatgccgattataacagctccgtaaaaaattctcacataggagaagagatttccatttcacaagagaaagcaggtgaacaaaggaagtttcttccagctgtctcaacatccttggctctagctgctggcatcggattgatggaaaccgtggcactgatccttgggtctgggacactactggacatcgtcggtgtacctgtcgattcaccgatgcgtataccagctgagcaattccttactttaagggcatatggtgcaccgccagtcatagtagcgcttgcagcacaaggtgcttttcgtggattcatggatacaaagacaccgttgtttgctgtggttgctggtaacctagtgaatgcattgctggatgctatatttatttttccacttggtctaggagtaagtggcgctgcattggcaacagtgacttctgagtatttgacagcgttcatcctcctctggaagttgaatagcaaaatagttctgttctcatggaatattgtttctggagacatcatccgctacctaaaatctggtgcgctgctaattgcaagaaccatagcagtagtcctgacattcactgtgtcgacatccctggctgccagggaagggtctgttccaatggctggctatgagatatgtttgcaagtgtggctaacgatttctctactcaatgatgcactagctcttgctggtcaggctctacttgcaagtgaatacgcaaaaggaaactataagaaagcccgtattgtcttatacagagttctgcagattggaggcgtaactggtgcagcactttctacaaccttactccttgggtttggatatttgtccatgctgtttacagatgatgcagcagttttagacgttgcccaaactggagtctggtttgtcactgtttctcaaccaataaatgctgttgcgtttgtgatggatgggctctactatggtgtttctgactttgctttcgtggcatactctacattatttgcgggagctatctcatcagcagtactgcttgtggccgctcctaagtttggtcttggtggcgtctgggctggccttactctatttatgagtttgcgagcaattgctgggttctggaggttagggagcaaaggtggaccatggaaaataatctggtctgaaactgagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>STVTRSRGMTATSPPMRSVAAAALVLTPTPTLNRLSFPFAHRHC PSTAAPRWRPARCRGKPAVEDVVHDDEEETWRREANPERKDGGEEMLGRGWFMVDEIG MEILTIALPAVLALAADPITALIDTAFVGHVGSTELAAVGVSISIFNLVSKLLNVPLL NVTTSFVAEQQAVDADYNSSVKNSHIGEEISISQEKAGEQRKFLPAVSTSLALAAGIG LMETVALILGSGTLLDIVGVPVDSPMRIPAEQFLTLRAYGAPPVIVALAAQGAFRGFM DTKTPLFAVVAGNLVNALLDAIFIFPLGLGVSGAALATVTSEYLTAFILLWKLNSKIV LFSWNIVSGDIIRYLKSGALLIARTIAVVLTFTVSTSLAAREGSVPMAGYEICLQVWL TISLLNDALALAGQALLASEYAKGNYKKARIVLYRVLQIGGVTGAALSTTLLLGFGYL SMLFTDDAAVLDVAQTGVWFVTVSQPINAVAFVMDGLYYGVSDFAFVAYSTLFAGAIS SAVLLVAAPKFGLGGVWAGLTLFMSLRAIAGFWRLGSKGGPWKIIWSETE</aaseq> |
| Gene Sequence |
<dnaseqindica>3..402#741..888#963..1134#1756..1891#2339..2435#2573..2673#2887..3050#3132..3201#3299..3417#3503..3598#3690..3811#3896..3947#agtccacagtcacacgctcgcgcggcatgacggcgacctcgccgccgatgaggtctgtcgccgccgccgcgcttgtcctaacccccactccaacgctcaaccgtctctcctttcccttcgcccaccgtcactgccctagtactgctgctcctcggtggaggcccgcgcggtgccgcgggaagccggcggtggaggacgtggtacacgacgacgaggaggagacctggcggcgggaggccaaccccgagaggaaggatggaggagaggagatgctcgggcgcgggtggttcatggttgatgagattggtatggaaatcctcaccatcgccttgcctgctgtgctcgccctcgccgccgaccccatcacggcgctcatcgacaccgccttcgttggccatgtcggtaaggaccttaattgcttcctcacttactacttgtaattgtcccttcattctatacaaatctacatttaccgcacaagaaaaattatatccccttttggactggagtggagagtgagctcctcaatttcttgcgtcggttcttgacaatgaaatagggaaaaatattctttctatgaaattacatgctacgatgacttcaattctgaactcagaatatctgtttccgctgtcttatgttgtgaagaaacttatttcttacacatttacattcttatttgctacaaaaatgttgatcacgatactaattcacttggcggtctccaactcattcaccaggttcaactgaacttgctgccgttggagtatccatttctatcttcaatttggtatccaagctgctcaatgtcccattgctcaacgtcaccacatcctttgttgccgagcagcaggcagtggatgccgattataacagctccgtaaaaaagtaaccaatctgcacatcttatttgctttttaaaatctttccttcttgtttgcacactactgattagtgtttagttctcacataggagaagagatttccatttcacaagagaaagcaggtgaacaaaggaagtttcttccagctgtctcaacatccttggctctagctgctggcatcggattgatggaaaccgtggcactgatccttgggtctgggacactactggacatcgtcggtgtacctgtcgtacgtaagctaatttatttcagtattcagttatctaggatttatctgttctctgaaacatggttgttgatatctaaaatcgtgtgtagaactatcagctaggtgggtcaagtgccacattttttgtcgtgtttttatgtattcatcttgatgtatattactattacttcaaaaatgtttccagacctattctatgtgctttattagtcaagttttcagctgataataaggaatcaaaacaacagtccttgatcaatgtgtgaatatgaagccaaactagaatttacattaaaataatagcatgacactataacaatatttggacaaagtttgtaccgtaagcatattacttatttatatggataccagcatattacagagcacaaaatatttacctaacgggcccttgaaactgatcaccctaaaggcattagcccattaataaaattttgggggaccaaatttagtctgcaacacctactctcctttggtttattcatttcaaacatagtgagcttaaggctacgtaaccttggaattattctaaacaatctttattacagatctagcaagttcttaatactcttgcttcaacataagttctctatacaacctacacaggattcaccgatgcgtataccagctgagcaattccttactttaagggcatatggtgcaccgccagtcatagtagcgcttgcagcacaaggtgcttttcgtggattcatggatacaaagacaccgttgtttgctgtgggtaagacaatgtatgcaaactcttctggatgaaataattggttttagggtgcttttcaattcttccgtcttccatttggacttgctagttgctttcaatctggtatttgaataccaacacttctttttagatgaaataccttcactacttgtttcagtgcatgtgtaaattctcatgatacaatttgattgatagtatttctcacatgcatcttttagttcttataactatgtttttagtgttatttatatgttctgtgctggctgttaagttcaaaataacttaaatttctgagcatgtgttctgaaattcagcctgatgcatatgatctgctgtggttattcaagtatagttacttattttattgttactatggtttgtttcttgtttaagacaataaatttattcgactcaaattataagaaactaatactctggtgcttacagttgctggtaacctagtgaatgcattgctggatgctatatttatttttccacttggtctaggagtaagtggcgctgcattggcaacagtgacttctgagtatgttgaacttactgtgagactttacaacaaatttaccttttctttcaattgtagtctcttcacttatctcaatattttctataagttctcatagatccctgatctatttttcataattatctgcatgtatttaggtatttgacagcgttcatcctcctctggaagttgaatagcaaaatagttctgttctcatggaatattgtttctggagacatcatccgctacctaaaatctggttggtcaatattcctcatgttgatttccaaagactacaaatggtggtcttgcttcgtaagaaaacgttgatctaaatgaacagatgaaactattgataagctccaagtccatttagtacttgctctattaaacaagtttcatcttgctgcaatttatctctattaaacaaaaaaaaaaacactttaacatacaccaatacatgattctctaggtgcgctgctaattgcaagaaccatagcagtagtcctgacattcactgtgtcgacatccctggctgccagggaagggtctgttccaatggctggctatgagatatgtttgcaagtgtggctaacgatttctctactcaatgatgcactagctcttgctggtcaggtgtgtacatttacaggaacagacctttagtttctagcctctaattgtgttcacttgtaaagtgttcataatataatgcaggctctacttgcaagtgaatacgcaaaaggaaactataagaaagcccgtattgtcttatacagagttctgcaggcaaggagacattataatattatgttctcaaatgattgacatttatcctcttattttcgctcttgctataagatcctcatactatttttttatgtagattggaggcgtaactggtgcagcactttctacaaccttactccttgggtttggatatttgtccatgctgtttacagatgatgcagcagttttagacgttgcccaaactggagtctgggtaatgactattctgagaagtcaatacttgatttaccaagtgatatgcaatggttttatagtaattggctgatggatttttgcagtttgtcactgtttctcaaccaataaatgctgttgcgtttgtgatggatgggctctactatggtgtttctgactttgctttcgtggcatactctacagttcagatttctattcttatcatgtcccattgtatagtttatcagttatagctgcagcatcctaatcacattagtatttttcttgtttcagttatttgcgggagctatctcatcagcagtactgcttgtggccgctcctaagtttggtcttggtggcgtctgggctggccttactctatttatgagtttgcgagcaattgctgggttctggaggtagtaatggatgattgcttaggatgtaggccaattctgttagaaagcaaagttgttgacttgagtgattttgtggtttttcaggttagggagcaaaggtggaccatggaaaataatctggtctgaaactgagtaaagaaaaaagatagtgatgcataattattagattaacatcttacagcaaacatgtaaaggcaactacacaggaaaggcagatagctgctggtcatagttcagaataagattttctttgggagatgacaaatgtatgtagtgatttggttacaagaagtacagatacagatacttgttggtggctctagatagatagctctctctttgttttgactgctataggaagttgattcgacttgtacagtgctgtcctatagaatggacaaagctgatagctgatgtacacaggaacattcagaatcattcatccatgtaaataagtctttctttgggaaaagtgtactgtttagtgaac</dnaseqindica> |
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