BGIOSGA020406
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA020406 |
|---|---|
| Description |
Isocitrate dehydrogenase [NADP] |
| Definition |
Oryza sativa Indica Group BGIOSGA020406, complete gene. |
| LocusTag |
OJ1735_C10.15 |
| Ensembl Transcript ID |
BGIOSGA020406-TA |
| Ensembl Protein ID |
BGIOSGA020406-PA |
| Length |
3455 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29893379..29896833 |
| Sequence Coding Region |
29893379..29893478,29893746..29893789,29893899..29894008,29894297..29894334,29894418..29894495 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome05:29893379..29896833 source=RiceIndica05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome05:29893379..29896833 source=RiceIndica05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGTCCACCAAGATCAAGGTCGCCAACCCCATTGTCGAGATGGACGATCAGTCTGATCCCTCTCCCATTTTCCCCTCCCTACACGGATCTGCTACTAGTGATGAGATGACTCGAGTATTCTGGAAATCTATCAAGGACAAGCTTATCTTCCCGTTCTTGGAGTTGGACATTAAGTACTTTGATCTCGGACTTCCATACCGTGATCAAACCGACGATAAAGTCACAGTGGAGGCAGCAGAGGCTACCCTCAAGTACAATGTGGCCATCAAGTGTGCAACCATTACACCAGATGAAGCAAGGGTTAAAGAGTTCAGCCTAAAATCCATGTGGAAGAGCCCAAACGGCACAATTAGAAATATCCTAAATGGCACTGTGTTCAGAGAACCAATAATCTGCAAAAACATCCCTCGGCTTGTTCCAGGATGGACTAAGCCCATTTGCATTGGAAGGCACGCATTTGGTGATCAGTACCGTGCAACGGATGCAGTTATCAAGGGACCTGGCAAGCTTAAATTGGTTTATGAGGGAAAAGATGAGGAGATTGAGCTGGAGGTGTTCAACTTCACTGGTGCTGGAGGAGTGGCACAGTCTATGTACAACACTGACGAGTCCATCCGTTCCTTTGCTGAGGCCTCTATGGCCACTGCTTATGAGAAGAAATGGCCATTGTACCTCAGCACCAAAAACACAATTTTGAAGAAATATGATGGCAGGTTCAAGGACATCTTCCAGGAGGTATATGAAGCTCAGTGGAAATCAAAATTTGAGGCTGCTGGAATATGGTATGAGCATCGTCTCATTGATGACATGGTTGCCTATGCACTCAAGAGTGAAGGAGGCTATGTTTGGGCTTGCAAGAACTATGATGGAGATGTGCAGAGTGATTTCTTAGCACAAGGTTTTGGATCATTGGGTTTGATGACATCAGTTTTGGTATGTCCTGATGGGAAAACCATTGAAGCTGAAGCTGCCCATGGGACTGTCACCCGTCATTACCGTGTTCGTCAGAAAGGTGGTGAAACTAGCACAAACAGCATTGCCTCAATCTTTGCCTGGACAAGAGGACTTGCACACAGGGCAAAGCTAGATGACAATGCTAGGCTACTGGACTTCACTCAGAAGCTTGAAGCTGCCTGCATTGGCGCTGTCGAGTCTGGGAAGATGACCAAGGACCTTGCTCTGCTTGTTCACGGATCTTCAAATGTCACGAGGAGTCATTACCTGAACACTGAAGAGTTCATCGATGCTGTTGCTGACGAGCTCAGATCAAGGCTGGCAGCCAACTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MASTKIKVANPIVEMDDQSDPSPIFPSLHGSATSDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTVEAAEATLKYNVAIKCATITPDEARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIPRLVPGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVYEGKDEEIELEVFNFTGAGGVAQSMYNTDESIRSFAEASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAQWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVRQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLDFTQKLEAACIGAVESGKMTKDLALLVHGSSNVTRSHYLNTEEFIDAVADELRSRLAAN</aaseq> |
| Gene Sequence |
<dnaseqindica>1..100#368..411#521..630#919..956#1040..1117#1196..1249#1332..1433#1823..1908#1997..2100#2212..2280#2359..2474#2619..2653#2823..2965#3144..3269#3371..3455#ATGGCGTCCACCAAGATCAAGGTCGCCAACCCCATTGTCGAGATGGACGATCAGTCTGATCCCTCTCCCATTTTCCCCTCCCTACACGGATCTGCTACTAGTCTCCAATGGATTCCGGCGTGTCCTCAATTCGTCATGCGTATCGTTTTGCGACTCTGTTTGAGCTTATCTTTAGTCTAGGTTCAGTAGCGTGCCACAGGAAGCCTCTCGGATCTACTAGATCCTCTGCATTGTGCTTGGTTTGGCTAGAATTGGGGATCCGATTCGCGATGCGAGTTTTTTTTTTTTTGAGGTGGTCGAGTGCTCCTCTCGAGATATGGCACATTGGCACTCACGTGCGTTTTCGGATTGGATTTTCCGTTCGCAGGTGATGAGATGACTCGAGTATTCTGGAAATCTATCAAGGACAAGGTAATGGACAGGCTTGCTGATTGATTCTTTCTTGATGTGCTTTCAACTTTCACTGCTGGTGACTGGTGTTCTTATAAAAAAGGACATTCTTTTAACACTAAATATGCAGCTTATCTTCCCGTTCTTGGAGTTGGACATTAAGTACTTTGATCTCGGACTTCCATACCGTGATCAAACCGACGATAAAGTCACAGTGGAGGCAGCAGAGGCTACCCTCAAGTAAGAACTTTATGCTAAGTAAGCTTTACAAGGACAGAGTCACTTGATGCTTGATTTGTAGTCGAATTGCTAATGTGCAGTTGCGTATATTAGGTATCTATACATTCAATGTACTATTTGATCAGTGCAAAGGAATTTCCTTGTGCATTTCTGACAGCCTGTTACTTATTTACTTGTTCCTTCAGTTCTGCTTAGTATTGTTGCCTGTGTTTGAACATTTCACTGCATATTCTGCAGTGTATACCTATGTTAATTGTTTATGTTCTCTGCTCCTCCAATCATTCGTAGGTACAATGTGGCCATCAAGTGTGCAACCATTACACCAGGTATATTTGTGTTGATGCGTGTTGACAAATGTCAATGGTTTGCAATGATTTTGTTACTGAGTATTGTATCAAAACTATGACAGATGAAGCAAGGGTTAAAGAGTTCAGCCTAAAATCCATGTGGAAGAGCCCAAACGGCACAATTAGAAATATCCTAAATGGTAAGGTGCTGCTGTAATTCCATCTGGTTCAGACACTCTGAATTCTGATATTCATGTTTCTGCTCTTGCTACCTTCAGGCACTGTGTTCAGAGAACCAATAATCTGCAAAAACATCCCTCGGCTTGTTCCAGGTATTGGAAAACACCAGACATTATTACTATTTTTTATGCAATCTTTCTTACACTTACTGAAATGAAATGGTTGTGTTTTCAGGATGGACTAAGCCCATTTGCATTGGAAGGCACGCATTTGGTGATCAGTACCGTGCAACGGATGCAGTTATCAAGGGACCTGGCAAGCTTAAATTGGTTTATGGTACGCTACCTTATGTACCTTAGACACACATAAATGGAATATTTTTTCCTAGCTAAACCTCATAATTTATACTCCCTCCGTCTCTTAATATAAGGAATTTTGACATTTTGCCTGCACTGTTTGGCCATTTTGTCTTATTCAAAAAAATTTGGAATTATTATTTATTTTTTTGTGACTTACTTTATTATCCAAAGTACTTTAAGCACAACTTTTCGTTTTTTATATTTGCACAATTTTTTTGAATAAGACAAGTGGTCAAACAGTGCAAGCAAAATGTCGAAATCCCTTATATTATGGGACGGATGGAGTAATTGCAACGTAGATGGTATAGACCAATTGGCATGAATTAGATTTTTACCTTTTTACTTTCTTTTTTTCCTACTGTTAAGAGGGAAAAGATGAGGAGATTGAGCTGGAGGTGTTCAACTTCACTGGTGCTGGAGGAGTGGCACAGTCTATGTACAACACTGACGAGGTACAGCTTGCCACTTTCTATTGTTCGTTTCAAGCATGCGTATGTCATTTTTTTTTGTGATTCATGCTCTTAGCGTTTGATTTTGTAGTCCATCCGTTCCTTTGCTGAGGCCTCTATGGCCACTGCTTATGAGAAGAAATGGCCATTGTACCTCAGCACCAAAAACACAATTTTGAAGAAATATGATGGCAGGTATTGATGTTTCTAGCCTATTCTAACACTGACCCTTTTTGCCCTTGCTGTACCTTTGCCATCGTATAATGCAATTATGCATTGGTCTGACTAGTTGGGATTTATTTGCAGGTTCAAGGACATCTTCCAGGAGGTATATGAAGCTCAGTGGAAATCAAAATTTGAGGCTGCTGGAATATGGTACATTTCCACATTTCCTTTTCTTTCCTTGATTTTTCATCCTGGTATCTAGTGTTTGGTGACTTTGGTCTCTGTCAGGTATGAGCATCGTCTCATTGATGACATGGTTGCCTATGCACTCAAGAGTGAAGGAGGCTATGTTTGGGCTTGCAAGAACTATGATGGAGATGTGCAGAGTGATTTCTTAGCACAAGGTTATATACCCAATTTCTTGCCTTTGCAATTTGTACTCAAACTTTGAGTAATGTATGCTTTCTCTTGGTTAAGAAAAAAATGCCGAACAATCATGGTTAAATGGTATTTGAGCTTGTAATGACAATAGATTTCTTCAATTGCAGGTTTTGGATCATTGGGTTTGATGACATCAGTTTTGGTAGGTAACCACATTTTATTATTCTTGTTATTTATTGATGGTAAATGTGTCACTATGCCTGGTGATACTATTTTTTACTTTGTTATAAGGAAACAAGTTATTTCACTTGGATGTGTGCTAGACATGGTTTTTATAATGGTGCTAACTGGTTCATGCACTCATGTTCTAGGTATGTCCTGATGGGAAAACCATTGAAGCTGAAGCTGCCCATGGGACTGTCACCCGTCATTACCGTGTTCGTCAGAAAGGTGGTGAAACTAGCACAAACAGCATTGCCTCAATCTTTGCCTGGACAAGAGGACTTGCACACAGGTACAGTTATCAACACTGAATTGCTCTATTGTATATGGAATTTTTTTGGTATATTGTCGAGTTTGCATGGTTGGAAAGAGGTGGTAGCATTGCGTTCTGCCGATAATGCAGGATATGTTGCTCAACTACCATGGTTCTGACCTGTGATTTCTCGATTACCACTTGTTGTGTGATATAGGGCAAAGCTAGATGACAATGCTAGGCTACTGGACTTCACTCAGAAGCTTGAAGCTGCCTGCATTGGCGCTGTCGAGTCTGGGAAGATGACCAAGGACCTTGCTCTGCTTGTTCACGGATCTTCAAAGTACGTTACTCAGCTATTATATGCTCTGAGGAATTGCAGTCTCAACGCTGCTACATCAATCTATACTGTATCTTTAACTGACTATTATCCTGCACTTACAGTGTCACGAGGAGTCATTACCTGAACACTGAAGAGTTCATCGATGCTGTTGCTGACGAGCTCAGATCAAGGCTGGCAGCCAACTAA</dnaseqindica> |
| External Link(s) |
