Os12g0112250

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os12g0112250

Description

Saposin B domain containing protein

Version

NM_001189830.1 GI:297728790 GeneID:9267024

Length

2498 bp

Definition

Oryza sativa Japonica Group Os12g0112250, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:627444..629941

Sequence Coding Region

627796..627877,628706..628944,629129..629326,629415..629474,629596..629754

Expression

GEO Profiles:Os12g0112250

Genome Context

<gbrowseImage1> name=NC_008405:627444..629941 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:627444..629941 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttcaaagtcgcttcctttctcctactcctgttaatcgtcacctgcggagctgctcaaggtcaaggcaatgattttgttgtccttgatctaaaaacaactgaggtcggggaagatgctagcccaatgtacaaggagcaaattgcgttgaccaagatacctgtaactcttctgaggagcaagcacagctcactgtgctcggcttgtgaaaacatcacaagcgaagcagtcaactttcttagtgagaaacaaatacaagataagataatgactatccttcatgacacttgttctcagacattctcctttgagcaaaagtgtcttgagactatggactcctatgcaactctcgtctttgcaaaaattgctgagattaagccagatgagttctgcaaacagtatggcctctgcagggacatggctcttttatcagctatgaaaagtgaaagcacatgcgtattctgccaccacatcatcgatgaaattatgtccaaactgaaagatcctgatgcagagtttgagatcattcaattactactcaaggaatgcaacaagattgaaggtcatcagcagcagtgcaagaggatggttctgcagtacgtccctctggttctagtgaacggtgagaagttcctggagaagaacgatgtgtgcgcaatgatccaagcctgtgatgcaggcaagaggaaggcattcaacttgttctctgcacggaaattggtgcgtgacgcatga</cdnaseq>

Protein Sequence

<aaseq>MDFKVASFLLLLLIVTCGAAQGQGNDFVVLDLKTTEVGEDASPM YKEQIALTKIPVTLLRSKHSSLCSACENITSEAVNFLSEKQIQDKIMTILHDTCSQTF SFEQKCLETMDSYATLVFAKIAEIKPDEFCKQYGLCRDMALLSAMKSESTCVFCHHII DEIMSKLKDPDAEFEIIQLLLKECNKIEGHQQQCKRMVLQYVPLVLVNGEKFLEKNDV CAMIQACDAGKRKAFNLFSARKLVRDA</aaseq>

Gene Sequence

<dnaseqindica>353..434#1263..1501#1686..1883#1972..2031#2153..2311#actctataattgcagcggcaagatcgattttttacaaaccaacaaagcagaaaggattcacgcgccgccgcttgcgatttgtgagttgtctttcccctttcgattccccctcctctcttccttcccctatcgtcaactagctcgagttgcttgcttgttccctctgctgcttcctctcttgtgtggattggattcccggcctggccctttctttttcctcttctctcctagattagaatcgtcgcgatttgattcctcaatctctcgatttggccgccctatctgttattaatccccaattgttcttcacacacatactcaattgcaggtcaattgcagccagaaagaggcgatggatttcaaagtcgcttcctttctcctactcctgttaatcgtcacctgcggagctgctcaaggtcaaggcaatgattttggtacgccctaatccaacaccttcccttcctcccttacctatgctcctcctggctcctgcatgcagtttggaaccaacatgtcaaacattctcaagggaaaattggacaagttttttattgtgcgtagtaaagtatcattctaaaatttatatatatgggcagctgctgtgggtattttatttggttgaaattcaacttgaggataacctgctactgatcctcttagcttggttattcattgcctgcaaaatgcatccattatttttgttcaagctttgccatgcactcgttacaaagtcccatgttcatctcacaatggtacacaatgataaacattgtggtcacaataaattattgatagagaaaaaggaaaaagaggatagcctaatctaattgttggcatctctgatttctctcgtatgttaaacctaggctagttattatttatttatgctagttatggtatgttttaacagtgttacttttttaaaaatttctgcaacaccaattattggttatgggtacatacttctcataaaaaggattatggatacatacaacaaggctagagatgcaatatcacataatgtgacaggaattaactggttccagcttcacagaaatgagaatgtgcttcccaattattggcaatggtttacttttacttcttaatatgtaatagaaattattattttttgctgacgaccttcatgatattttattcaggcaaaattagttatgtagcaccgaaatttcacgatcttattttcattctatttatttgtttgcaccgaaattaccttttgtttattattcattccttctcagttgtccttgatctaaaaacaactgaggtcggggaagatgctagcccaatgtacaaggagcaaattgcgttgaccaagatacctgtaactcttctgaggagcaagcacagctcactgtgctcggcttgtgaaaacatcacaagcgaagcagtcaactttcttagtgagaaacaaatacaagataagataatgactatccttcatgacacttgttctcagacattctcctttgagcaaaaggtaattgttcccttttgatttggtttgttagatcttatatattgtgtctgtatattagaaatacaaccaatttgatcaaaagatatgacacatgtaggaatttgattcccttactaaagtaccaagaaggaaagatattccatgaacaatagtagtttaacatgatcactttgtatgtctgcagtgtcttgagactatggactcctatgcaactctcgtctttgcaaaaattgctgagattaagccagatgagttctgcaaacagtatggcctctgcagggacatggctcttttatcagctatgaaaagtgaaagcacatgcgtattctgccaccacatcatcgatgaaattatgtccaaactgaaagatcctgatgcagaggtgattgattttccctcgattacacaattacatcgataaataatgagcatacatttggaccctaacatcttgtgtgtgatgtttgcagtttgagatcattcaattactactcaaggaatgcaacaagattgaaggtcatcagcagcaggtaaaacatttgaagtagtttgtaaaaattctctctctgacccaataatgcttgtttggttaatgtacatgtctacatgagtgatatgggttgatgaaatcgtacgttttcttgttgacagtgcaagaggatggttctgcagtacgtccctctggttctagtgaacggtgagaagttcctggagaagaacgatgtgtgcgcaatgatccaagcctgtgatgcaggcaagaggaaggcattcaacttgttctctgcacggaaattggtgcgtgacgcatgaagtagtaggaagcgtgcatacacgaatcaagttgtggtaggcatggagaagacgaagaagtgatggcagcttgtacatatggttgttattaatgatataggcaatactactctgtgaaggggataatccgataattgtatgcacacatttgaactgtttgtctgatagtaatggctatacttacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0112250, RefSeq:Os12g0112250