BGIOSGA024130

From RiceWiki
Revision as of 16:50, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024130

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA024130, complete gene.

LocusTag

OJ1612_A04.135

Ensembl Transcript ID

BGIOSGA024130-TA

Ensembl Protein ID

BGIOSGA024130-PA

Length

3767

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19807398..19811164

Sequence Coding Region

19809947..19811164,19808984..19809166,19807398..19807682

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19807398..19811164 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19807398..19811164 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGGCGGTGCTCGTCCCCATCGACGAAGGCAGCGACGGGGAGGGCGGTAGCGCCACGGACGTCGCAGCCCCCTCCCCCGCTCCCATGGACATCGACGGCGACGACGACGGGCGCGACCGCGGAGGAGAAGGCGATGGCGCTGCGGCGAGCGTCCCGGCCGCCGACGGAAGTAGCGCCGCGCTCTCCCTGACGCTGGGTCTCCACGTCCACGGCGACGGAGGCGGCGCGGACCGCCTCAGCGATCTCCACGAAGACATCCTCGCCAAAATTCTGGGCCATCTCAGGGACATCCGCAACGTCGCCACCACCGCGGTCCTCTCCAGGCGCTGGCTCGACCTCTGGACCCTGGTCGACATCATCGTCTTGCAGTATGATGAGCCCCCCGACTCCAGAATCGTGCAGGAAGTTCTCGCCGCCCGCGCGAGGAATGGTTCCACGGCCACGGACATCCGCCTGCTCGAGGTCACCTCCCTCAACAGCGCCACGCCGGACGCCACGGCCTCCTGGCTCCGCGTCGCCGCGCCCCGCCTCACCGGCGAGCTCTTCTTCCGCAACAGGTCCTCGGTTCCGTCCGAAATTCTCAACGAGGAGATGGACGTCGTGGAGCAGCTGGTCGAGGAGCTTGGGGACTTGGTGGTGGACGAATCGGGCGCCTTCGAGCTGCCCTGCTTCATGAGGGTCACCAAGATAACGCTGAGCCTGTGGTTTCTCGGCCTATCGCTGCCACCATCGGGTGTCTTCGCCAAGCTCAGGGAGCTGCACCTGGTGCACGTCCAGTTCAATGGCGAACTCACCATGGAAGATGCCATGCTCCCCTCCTTGGAATGGCTAGAGATTCGCCATTCCAGTGGCTTGGCCTCCCTGACGCTCAGGCTGGCGCCTCTGACCCTGATGACTCTGTACAATGTGCGGCGGTTGCGTCGGCTCAACGCCGTGCTTCCAGGGCTCGAGGTGTTGTCTGTAACGGAATGCTTCCTCGAGGATCTGGAGGGTGTGAGCATTGTGGCAGAGGAGCTGGAGGACCTGCGGTGGCTAGATATGTACCAGCCTGGATTGGTCTACTTCAAGAGGATGCCGCGCCTGCAGATGTTGTTGCCCCCCGCTGTTTATCCTTATGGATTGCAGAACGTTTTCTTCAATCGGAGCTGTCAGATGCTTCTCAATCTCTGTCCAAGCATTGACGGTCTCCTGCTGTTCGTTGAAATTGAACTAGAGCAAGGCGACAAGCATGGCGTTAGGCCTTTAATGGAAGGCATTACCCAACTCCCTCACATTAAGATCTTGTGCTTGAATTTACTAACACGAGGGCATGCTTATGGAGCTAGTGTGTTGCATATTCTGACAATGTGTACTGGTATAGCAGTGCTGGGCCTGAGAATAGAAGAAGATTTCCAGGTTGAAAATGCTTGTCCAGTGAACTGCCTCTGTGACCGGCCACGAAACTGGAGAGATAAGGACATTTCGATGAGATCTCTCACAGAAATAGTGATCCTCAACTTCAGAGGGAAGCAACATGAGCTTGACCTTGTGAGGGTCTTAGTCCAGGTAGCACCAGCCCTTGACCTTGTAAGAATGACATGTCACCGTTCGTTAGCTGCTTTTGGGGTAGAGTTGCTACGTGCCTATGTACGAAGTTTTGCAAGCTTTAGGACTTCTGTGGAAGTGAGTCAAAGTAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAPAVLVPIDEGSDGEGGSATDVAAPSPAPMDIDGDDDGRDRGGEGDGAAASVPAADGSSAALSLTLGLHVHGDGGGADRLSDLHEDILAKILGHLRDIRNVATTAVLSRRWLDLWTLVDIIVLQYDEPPDSRIVQEVLAARARNGSTATDIRLLEVTSLNSATPDATASWLRVAAPRLTGELFFRNRSSVPSEILNEEMDVVEQLVEELGDLVVDESGAFELPCFMRVTKITLSLWFLGLSLPPSGVFAKLRELHLVHVQFNGELTMEDAMLPSLEWLEIRHSSGLASLTLRLAPLTLMTLYNVRRLRRLNAVLPGLEVLSVTECFLEDLEGVSIVAEELEDLRWLDMYQPGLVYFKRMPRLQMLLPPAVYPYGLQNVFFNRSCQMLLNLCPSIDGLLLFVEIELEQGDKHGVRPLMEGITQLPHIKILCLNLLTRGHAYGASVLHILTMCTGIAVLGLRIEEDFQVENACPVNCLCDRPRNWRDKDISMRSLTEIVILNFRGKQHELDLVRVLVQVAPALDLVRMTCHRSLAAFGVELLRAYVRSFASFRTSVEVSQSN</aaseq>

Gene Sequence

<dnaseqindica>1..1218#1999..2181#3483..3767#ATGGCGCCGGCGGTGCTCGTCCCCATCGACGAAGGCAGCGACGGGGAGGGCGGTAGCGCCACGGACGTCGCAGCCCCCTCCCCCGCTCCCATGGACATCGACGGCGACGACGACGGGCGCGACCGCGGAGGAGAAGGCGATGGCGCTGCGGCGAGCGTCCCGGCCGCCGACGGAAGTAGCGCCGCGCTCTCCCTGACGCTGGGTCTCCACGTCCACGGCGACGGAGGCGGCGCGGACCGCCTCAGCGATCTCCACGAAGACATCCTCGCCAAAATTCTGGGCCATCTCAGGGACATCCGCAACGTCGCCACCACCGCGGTCCTCTCCAGGCGCTGGCTCGACCTCTGGACCCTGGTCGACATCATCGTCTTGCAGTATGATGAGCCCCCCGACTCCAGAATCGTGCAGGAAGTTCTCGCCGCCCGCGCGAGGAATGGTTCCACGGCCACGGACATCCGCCTGCTCGAGGTCACCTCCCTCAACAGCGCCACGCCGGACGCCACGGCCTCCTGGCTCCGCGTCGCCGCGCCCCGCCTCACCGGCGAGCTCTTCTTCCGCAACAGGTCCTCGGTTCCGTCCGAAATTCTCAACGAGGAGATGGACGTCGTGGAGCAGCTGGTCGAGGAGCTTGGGGACTTGGTGGTGGACGAATCGGGCGCCTTCGAGCTGCCCTGCTTCATGAGGGTCACCAAGATAACGCTGAGCCTGTGGTTTCTCGGCCTATCGCTGCCACCATCGGGTGTCTTCGCCAAGCTCAGGGAGCTGCACCTGGTGCACGTCCAGTTCAATGGCGAACTCACCATGGAAGATGCCATGCTCCCCTCCTTGGAATGGCTAGAGATTCGCCATTCCAGTGGCTTGGCCTCCCTGACGCTCAGGCTGGCGCCTCTGACCCTGATGACTCTGTACAATGTGCGGCGGTTGCGTCGGCTCAACGCCGTGCTTCCAGGGCTCGAGGTGTTGTCTGTAACGGAATGCTTCCTCGAGGATCTGGAGGGTGTGAGCATTGTGGCAGAGGAGCTGGAGGACCTGCGGTGGCTAGATATGTACCAGCCTGGATTGGTCTACTTCAAGAGGATGCCGCGCCTGCAGATGTTGTTGCCCCCCGCTGTTTATCCTTATGGATTGCAGAACGTTTTCTTCAATCGGAGCTGTCAGATGCTTCTCAATCTCTGTCCAAGCATTGACGGTCTCCTGCTGTTCGTTGAAATTGAACTAGTGAGTGCCTCTTTTTCCTCTGTTTCAGTCAAGTAATCAATTGTGTATTGCTCGAACTGCAATGTGGATTATCAGATGATTATCCTTCAGAATATGCAATTTTCTATTGCAAACTTGCAATTGTTAAGTTTAGATCATCTAAGCTCATGAGTGTTTAGGCTCAACACTCAATGCTCGATTCAGCTGCAGTTTTTTGTTGGCCTATCTTTTGCATTGTTGAGAGTTGAATATCTTGAATACTAGTTAGAAAGTTGCAGAATAGGAGAACAATCTTGAACTGAACTTCAAATGTATACTTGACCTTAGGAAAATAATTTTATCAGCACATTTTCAAGTGATACTTGTTTCTGTACAAAGGATCAATTGCTGCATTCATGTTTACTGAGCTAGCATAATTGCGAGTCATCCATGCTTGCATTTCTCGATATGCTGCAGTTTCTGAGTTGTCGTTACCAAAGAGATCGTCATTGATTATCAGTTGTTTCACCATTATGTGGTTGTTGAACATGATTACATAAGCCTGCAGATACATCTAATTCACTTGCACTACAATTGAATTCAGATTATATTAATTTCTATTACATCTGGCCGAAAAGCAGCATCCAAAGTTCCAAACTGAAAATGTTGACTCTGCAGCAAATTACTAGATCGTTACTTGTCTGCAAGCAAATTACTGATTCTTCAACTGTATGGCCTTCTGTCAAACATTTCTTTGCTCTTTCCCAGTTAGTTTTGCATTTTGTCTGAGATTACCTCTGTTAACTTCCTACAAATTCATAGGAGCAAGGCGACAAGCATGGCGTTAGGCCTTTAATGGAAGGCATTACCCAACTCCCTCACATTAAGATCTTGTGCTTGAATTTACTAACACGAGGGCATGCTTATGGAGCTAGTGTGTTGCATATTCTGACAATGTGTACTGGTATAGCAGTGCTGGGCCTGAGAATAGAAGAAGATTTCCAGGTAATCATGTTTCCTATGAATTCCGAACAACTGCGTTTTTTAATTCTAATTTCTATACCTGCAGTAAATTCTTAAGTGTAATTACAAACGCTCTGTTGGTTTAGGCAGGAAGTTACTCCCTCAGTCCCATATTTGACTCATCCCATTTGTGTCCCAAAATAAGTTCATTTTTAAGCAAACATTGCATCAGAGTTTGCGAAAGTGAAAAATAATTGTATAGGAAGTAGATAAAGCGAGAAATAATTGCATTGGGATTGAATAAAGTAGGGATATACTAGTTCTTAGTGTTTGTATTGGTATGTGTGGGATGATAGAAAAATAAGCTTATTTTGGGACATAGGTAGTACTACTCCGTCCTATAATAGATGTCGCTTTGACTTTCTGCTTGCAATTTTTGACCATTCGTCTTATTTGAAAAATTAGTGTAAATATAAAAAAAGATAAGTCATACTTAAATACTTTTGATAATAAACAAGTTAAAAAAATAAATAATAATTCCATAATTTTTTGAATAAGACGAATGATCAAACGTTACAAATAAAAACTCAAAGCAACAAGTATTTTGGGAAGGATGTAGTATCAATTATGCCTATTTATGACATAGCAAAAGCTAACTCTTGATATGAATTAATTTAATCTGGGCCTTTTGTTTCCCTATTCACATATTACTTGTCTTATCATCATAGCCCTCTTGGACAATATAATTTCCTACTGTCCTTTTAAATGATCCAGTCTGTCAGAGATGTAATAGATCCATGAAAGTTTTGGTAGCACTGAAAGTCATGCTTCATTGTGTGAACATATTATCCATCCTATGTGACATGCATTAAACCTGATTAGAAAAACAAAATCATGACAGGAAAAACTGCTGTTTCAATTTTCATCATTCCTTTCAGGGTGTGTTTAGTTCCTTAAAAAAGTTGAAAGTTTGAAGAAAGTTGGGAGTTTAGAAAAAAAGTTGGAAGTTTACGTGTGTAAGAAAGTTTTTGATGTGATATGATGTGATGGAAAGTTGGGAATAGGGGGAAACTAAACACGGCCTTACTAGGCCGTGTTTAGTTTCTGAAATTGGGGAGAAGTTTGGGGAAAGTTGGTAGTTTGGAAAAAAAGTTGGGAGTTTATGTGTGTAGGAAAGTTTTGGATGTGATGTGATGTGATGGAAAGTTGGGAGTTGGGGGAAGTTTGGTGTGAACTAAACACACCCTAGGTGCCGAACAATATGAACCTTCCGCAGTTACTCAACGTGTCAGACGATGAATCTCATTAACACCTTGTACTTTGTTCTGATCTTGTAATTTCAGGTTGAAAATGCTTGTCCAGTGAACTGCCTCTGTGACCGGCCACGAAACTGGAGAGATAAGGACATTTCGATGAGATCTCTCACAGAAATAGTGATCCTCAACTTCAGAGGGAAGCAACATGAGCTTGACCTTGTGAGGGTCTTAGTCCAGGTAGCACCAGCCCTTGACCTTGTAAGAATGACATGTCACCGTTCGTTAGCTGCTTTTGGGGTAGAGTTGCTACGTGCCTATGTACGAAGTTTTGCAAGCTTTAGGACTTCTGTGGAAGTGAGTCAAAGTAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024130