BGIOSGA025949

From RiceWiki
Revision as of 16:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA025949

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025949, complete gene.

LocusTag

OS07G0563700

Ensembl Transcript ID

BGIOSGA025949-TA

Ensembl Protein ID

BGIOSGA025949-PA

Length

5065

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20596542..20601606

Sequence Coding Region

20596542..20596703,20597378..20597692,20597766..20600860,20601039..20601137,20601258..20601606

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20596542..20601606 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20596542..20601606 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAACCTAAAGGTGGTTACCCGGATAGCGCAGAAGCTTCAGCTCCAGCTCGACGGGGAGACCGTGGTAGTCTCCGCCGTCGACGCCGAGCGCCGCCGCGCCTTCTTCGTCTCCTCCGAGAACTTCCTCTACTCCGTCGACCTCCCCGCCCCCACCCAGCAATCACTGCAATGGAGTGAAAGTACCCTAGACTCTGATGCAGAGGAGGTTGTTCTTGAACCTGGAGATTACATAGTTGCCATGGATTATCTAATGGAGAAGGAGTCTTTGCTGCTTGGTTCATCAACCGGTTGTCTATTATTGTATAATGTGGATGAGAAAACTACTGAAGTTGTGGGACGACTGGAGGGTGGTGTGAAGACCATTGCTTCTAGTCCTGATGGGGCCCTTATTTCTGTTACGACTGGGTTTGGACAATTGCTCATCATGACAAACGATTGGGAAGTGCTGTTTGAGACTTCTCTCGACCCTCATTATGATCTTACAGGTGATATCAACAGTCCCAATGGTCACATCCAAAGTTCTATTTCTTGGCGGGGTGATGGAAAGTTTTTTGCTACTCTTGGTGGGCTTGAAGGGAGCTCTCAGAAACTTACTATTTGGGAACGTGAATCAGGAAATATACATTCTTCTTCAGATACCAAGGCTTTTATAGGAGCATCACTTGATTGGATGCCAAGTGGAGCCAAGGTTGCCACTGCCCATGACCTGAAGACAGAGGGAAAGTGCCCTCTCATTGTATTCTATGAAAAGAATGGCTTAGAAAGGAGCCACTTTTCCATTGATGAGCCAGCAGAGGCTGTCATCCAAGCTTTAAAATGGAACTGCAATTCTGAACTCTTAGCTGCTCTAGTCTCTTGTGGCCAGTATGATGTTATCAAAGTATGGTCCTGCAGTAACAATCACTGGTACTTGAAACAAGAACTGCGATACACAAAGAAAGAAGGGGTGAGGTTCTATTGGGATCAAACAAAACCAATGCATCTCATCTGCTGGACATTAGGTGGTCAGGTTATTACGCACAGGTTTGCTTGGACTACTGCTGTCAGTGAGACTTCGATTGCGCTTGTTATTGATGGTTCCCATGTCCTTGTAACTCCTCTCAGTTTGGGTCTCATGCCACCCCCCATGTCTTTGTTCCATCTTACATTTCCTTGTGCTGTGAATGAGGTTTCTTTTCTATCCGATAACTCGAAAAACCATATTGCTGCTTATCTTTCTAATGGCAGCTTGTGTGTGTCGGTACTTCCGGTGGCAGATACTTGGGAAGAGTTTGAAGGCAGTGGCATAAGTGTTGACCCTTGCTTTTCTGAGTCAACACTGAATAACTATATGCACCTGACTTGGATTGATACGTGTACCTTGATCGGCATTTGTTGCCGCGCTGATGCCTTCTCTTCAACACCAATGAGGTCCAGTGAAGCTAGTAGCCTTCTAGAGAAAAATGACTCGCCATATTTTATCAATGAGATTGAACTTGTATGTTCCGAGGATTCTTTGCTAGGTTCAGCCTGTTCATCAGGTTGGCAGGCAAAAATATCGAAGAAAATGCCTCTGCAGGCTGCAGTTATTGGAATATCTCAAAATCCAGCAAAAGAAGGTTCAGCCTTTATTCAGTTAAGTGGAGGAAGGTTTGTTGAATACTGCTCAAAAGTGAATTTGTTTAGAATGTCTGCCCCGGTACAAGTTAGTGAAACAGGTTCCGACCATACTTTTCCAACATCATGCCCTTGGATGACTGCTGTTCAATGCCATGAAAATGGAATGGTTAGGACACTTCTCTTTGGACTTGATGATAGCAGCAAGTTGCATGTGGGCAAAAGGTTATTAAGCAGTAACTGTAGCAGCTTCACATTCTATTCCAGTGCTTATGGAGCAAAAGAGCAGGTTGTGACCCACTTGCTTGTGACTACTAAGCAGGATCTTTTATTCATCGTGGATATCAGTGAGATTTTACTTAAAAATGGCGAAGTGACAACCGATAGCCATATCAGGAGTCATCCTCGAGGAAAGCAAAGCAAAGAGCATATCACTGTATGGGAAAAGGGGGCAAAGCTGATTGGTGTTCTCCATGGTGATGAAGCAGCTGTCATAATGCAAACCACCCGTGGTAACTTGGAGTGTATCTACCCCAGGAAGCTGGTCCTTGTTTCAATTGTTCAGGCACTGGTTCAGGGACGTTTTAGAGATGCATTTGACATGGTAAGGCGCCATCGGATTGATTTCAATATGGTTGTTGACTACTGTGGCTGGAAATCTTTTATGAAGTCAGCGGCAGATTTTGTTAAACAAGTCAATAACCTTAGCCACATCACTGAATTTGTTTGTTCAATAAAGAATGAGAATGTCAGCAGCAAATTGTATGAGACCTACATATCATTTCCTGATCACTGTGCAACCTCTGTGGCTGATACTGTAAATTCTCATGGTCTGTTGTCAGACAACAAAGTCACATCTGTACTGATGGCAATTCGAAAAGCCCTTGAGGTGCAGGTGGAAGAAAGCTCATCAAGAGAACTCTGCATACTGACTACTTTAGCCCGTAGCGAACCTCCTCTGTTGGAGGAAGCACTGAATAGAATAAAAGTTATCCGAGAACTGGAACTTCTTGGGGTTGATGATGCCAGGAGAAAGCTCTACCCATCTGCTGAAGAGTCCCTGAAGCACTTGCTATGGTTAACCGAACCAGAAGCTGTTTTTAATGCTGCTTTGGGACTGTATGATCTGAATCTTTCTGCTATAGTAGCTTTAAATTCCCAAAAAGATCCAAAAGAGTTCCTTCCTTTTCTCAAGAGTCTTGAATGCCTTCCTCCTGCTATTATGAAGTACACAGTTGATTTAAGACTCGGAAGATATGAAAGTGCTCTCAAGAACATTGTTTCTGCTGGCGACGAGTATCATGAGGACTGTATGAAACTCCTCAACGCTAACCCTCAATTGTTCCCTTTGGGGCTCCAGTTATTCACTGACCCAGATAAAAGGCATCAAATTCTTGAGGCATGGGGTGATCAACTTTCTGAAGAGAAATGCTTTGCAGATGCTGCAATAACTTATCAATGCTGTTCGTCGTATCAGAAATCTTTGAAGGCGTATCGTGATTGTGGGGATTGGAGAGGTGTGTTCACTGTTGCAGGTCTTCTGAAGTTTAAAAAGGAAGAAATTCTTCAACTAGCACATGACCTATGTGATGAGTTCCAAGCACTTGGGAAACCAGGAGATGCTGCTAAAATAGCACTGGAGTATTGCTCAGATGTCGATAGAGGTGTTGGTTACTTTATCACGGCAAGAGAATGGGAAGAAGCTCTTCGGGTAGCTTATATGCACAGCAGGCAAGATCTGGTTGATACTGTTAGAGATGCAGCTTTGGAATGTTCTGCTTTGCTGATTTCTGAGTATCAGGAAGGATTGCTAAAGGTGGGTAAATATCTGGCCCGTTATGTTGCTGTACGGCAGAGGAGACTGTCACTTGCAGCCAAGCTCCAGTCTGAAGACCGATTTATGGATGTTGAAGACGACAGCATTTCAGAAGTCAGCACTAGCTTCAGCGAAATGAGTGCATATACCACAAGGTCAACAAAGGAATCTAGTGCTTCCGTCATATCTAGCAGTGCCAGCAAGTCAAGAGGGGCAAGGCGACAAAAGAAAGGTGGCAAGATACGAGCTGGAAGCCCTGGGGAGGAGATGGCACTTGTGGAGCATCTCAAAGGGATGTCTCTGACCTCTGGTGCTCTAACTGAGCTTAAAAGCCTACTTGTGGTTCTAATACAACTGGGAAGAGAAGAAACCGCCCGTCAGGTGCAGCTGGCTGGAGACAATTTTGAGGTATCTCAAAGGGCTGCAGTCAAGTTGGCTGAGGATACTGTATCCAACGACAAGATAGACGAGAATGCACATACGCTTGAGAATTACGTGAAAATGCTGAGAGCTCATCAGTCAGCTGATAGTGAAACCACCTGTTGGCGAATCAAAGCATTGTCGCCGCCTTGGACCGGGGTATACTCCAATTCACATGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MKNLKVVTRIAQKLQLQLDGETVVVSAVDAERRRAFFVSSENFLYSVDLPAPTQQSLQWSESTLDSDAEEVVLEPGDYIVAMDYLMEKESLLLGSSTGCLLLYNVDEKTTEVVGRLEGGVKTIASSPDGALISVTTGFGQLLIMTNDWEVLFETSLDPHYDLTGDINSPNGHIQSSISWRGDGKFFATLGGLEGSSQKLTIWERESGNIHSSSDTKAFIGASLDWMPSGAKVATAHDLKTEGKCPLIVFYEKNGLERSHFSIDEPAEAVIQALKWNCNSELLAALVSCGQYDVIKVWSCSNNHWYLKQELRYTKKEGVRFYWDQTKPMHLICWTLGGQVITHRFAWTTAVSETSIALVIDGSHVLVTPLSLGLMPPPMSLFHLTFPCAVNEVSFLSDNSKNHIAAYLSNGSLCVSVLPVADTWEEFEGSGISVDPCFSESTLNNYMHLTWIDTCTLIGICCRADAFSSTPMRSSEASSLLEKNDSPYFINEIELVCSEDSLLGSACSSGWQAKISKKMPLQAAVIGISQNPAKEGSAFIQLSGGRFVEYCSKVNLFRMSAPVQVSETGSDHTFPTSCPWMTAVQCHENGMVRTLLFGLDDSSKLHVGKRLLSSNCSSFTFYSSAYGAKEQVVTHLLVTTKQDLLFIVDISEILLKNGEVTTDSHIRSHPRGKQSKEHITVWEKGAKLIGVLHGDEAAVIMQTTRGNLECIYPRKLVLVSIVQALVQGRFRDAFDMVRRHRIDFNMVVDYCGWKSFMKSAADFVKQVNNLSHITEFVCSIKNENVSSKLYETYISFPDHCATSVADTVNSHGLLSDNKVTSVLMAIRKALEVQVEESSSRELCILTTLARSEPPLLEEALNRIKVIRELELLGVDDARRKLYPSAEESLKHLLWLTEPEAVFNAALGLYDLNLSAIVALNSQKDPKEFLPFLKSLECLPPAIMKYTVDLRLGRYESALKNIVSAGDEYHEDCMKLLNANPQLFPLGLQLFTDPDKRHQILEAWGDQLSEEKCFADAAITYQCCSSYQKSLKAYRDCGDWRGVFTVAGLLKFKKEEILQLAHDLCDEFQALGKPGDAAKIALEYCSDVDRGVGYFITAREWEEALRVAYMHSRQDLVDTVRDAALECSALLISEYQEGLLKVGKYLARYVAVRQRRLSLAAKLQSEDRFMDVEDDSISEVSTSFSEMSAYTTRSTKESSASVISSSASKSRGARRQKKGGKIRAGSPGEEMALVEHLKGMSLTSGALTELKSLLVVLIQLGREETARQVQLAGDNFEVSQRAAVKLAEDTVSNDKIDENAHTLENYVKMLRAHQSADSETTCWRIKALSPPWTGVYSNSHE</aaseq>

Gene Sequence

<dnaseqindica>1..162#837..1151#1225..4319#4498..4596#4717..5065#ATGAAGAACCTAAAGGTGGTTACCCGGATAGCGCAGAAGCTTCAGCTCCAGCTCGACGGGGAGACCGTGGTAGTCTCCGCCGTCGACGCCGAGCGCCGCCGCGCCTTCTTCGTCTCCTCCGAGAACTTCCTCTACTCCGTCGACCTCCCCGCCCCCACCCAGGTACGGTTCCTCTGCTCACCAATTTGTTATACTGCTTGAAATCTTCGTTTTATTGTTTGCCTCGCAACGTAGCAATAGTAGTACCACGCTCAGTACAAGAGGGATACACATATTATATGGTGTTAATTTACCATGCGTATGATTCTCAGATTCCAGTTTTTTGGGTCAATACACCCGTTTATACTTCTCACTAAATTTGGGCAGAACACTATGATTTTTTTTTTGTACAACGAAACAAACAAACACATCGTCATCTTCAATTTGCTATGGTAGCACTGAGCGTGTACCTTCTAACCTAAATATTTGATATTTAGGACAAGATCTTTTTCAAACTTTTAAAATTCCAACCATCAATAATTTCTCAAATTCTTAGTTTAAAACAAAAGTAATGGTGTTTGTAGATTTTCCTTGGAAAGTACTTCCTGCTTCTGTTTATATACGACGTCGTCATATATAAATGGAAGGAGAGTAATATCATAAACTTGCTATATTTTATAAACTTTTTCTAGTATAAATTTTATGGTTGGAATTTTGAAAGTTTGATCAAATCTTGTCCTAAACGTCAAATATTTATGGCCGAAGGGAGTATATAATCTGTTTTTTTAGTCAATATGATTATTACCTTTTCTTTTGCTAGTATTTCTGTTTTGCTGATTGCCTATTTTGTCTTTCAGCAATCACTGCAATGGAGTGAAAGTACCCTAGACTCTGATGCAGAGGAGGTTGTTCTTGAACCTGGAGATTACATAGTTGCCATGGATTATCTAATGGAGAAGGAGTCTTTGCTGCTTGGTTCATCAACCGGTTGTCTATTATTGTATAATGTGGATGAGAAAACTACTGAAGTTGTGGGACGACTGGAGGGTGGTGTGAAGACCATTGCTTCTAGTCCTGATGGGGCCCTTATTTCTGTTACGACTGGGTTTGGACAATTGCTCATCATGACAAACGATTGGGAAGTGCTGTTTGAGACTTCTCTCGACCCTCATGTAAGTTTTTGTTTACATGATCTGACTAAAGATATGACTAAAATGTTCTCATTCTACACATGCTTGTTTCCAGTATGATCTTACAGGTGATATCAACAGTCCCAATGGTCACATCCAAAGTTCTATTTCTTGGCGGGGTGATGGAAAGTTTTTTGCTACTCTTGGTGGGCTTGAAGGGAGCTCTCAGAAACTTACTATTTGGGAACGTGAATCAGGAAATATACATTCTTCTTCAGATACCAAGGCTTTTATAGGAGCATCACTTGATTGGATGCCAAGTGGAGCCAAGGTTGCCACTGCCCATGACCTGAAGACAGAGGGAAAGTGCCCTCTCATTGTATTCTATGAAAAGAATGGCTTAGAAAGGAGCCACTTTTCCATTGATGAGCCAGCAGAGGCTGTCATCCAAGCTTTAAAATGGAACTGCAATTCTGAACTCTTAGCTGCTCTAGTCTCTTGTGGCCAGTATGATGTTATCAAAGTATGGTCCTGCAGTAACAATCACTGGTACTTGAAACAAGAACTGCGATACACAAAGAAAGAAGGGGTGAGGTTCTATTGGGATCAAACAAAACCAATGCATCTCATCTGCTGGACATTAGGTGGTCAGGTTATTACGCACAGGTTTGCTTGGACTACTGCTGTCAGTGAGACTTCGATTGCGCTTGTTATTGATGGTTCCCATGTCCTTGTAACTCCTCTCAGTTTGGGTCTCATGCCACCCCCCATGTCTTTGTTCCATCTTACATTTCCTTGTGCTGTGAATGAGGTTTCTTTTCTATCCGATAACTCGAAAAACCATATTGCTGCTTATCTTTCTAATGGCAGCTTGTGTGTGTCGGTACTTCCGGTGGCAGATACTTGGGAAGAGTTTGAAGGCAGTGGCATAAGTGTTGACCCTTGCTTTTCTGAGTCAACACTGAATAACTATATGCACCTGACTTGGATTGATACGTGTACCTTGATCGGCATTTGTTGCCGCGCTGATGCCTTCTCTTCAACACCAATGAGGTCCAGTGAAGCTAGTAGCCTTCTAGAGAAAAATGACTCGCCATATTTTATCAATGAGATTGAACTTGTATGTTCCGAGGATTCTTTGCTAGGTTCAGCCTGTTCATCAGGTTGGCAGGCAAAAATATCGAAGAAAATGCCTCTGCAGGCTGCAGTTATTGGAATATCTCAAAATCCAGCAAAAGAAGGTTCAGCCTTTATTCAGTTAAGTGGAGGAAGGTTTGTTGAATACTGCTCAAAAGTGAATTTGTTTAGAATGTCTGCCCCGGTACAAGTTAGTGAAACAGGTTCCGACCATACTTTTCCAACATCATGCCCTTGGATGACTGCTGTTCAATGCCATGAAAATGGAATGGTTAGGACACTTCTCTTTGGACTTGATGATAGCAGCAAGTTGCATGTGGGCAAAAGGTTATTAAGCAGTAACTGTAGCAGCTTCACATTCTATTCCAGTGCTTATGGAGCAAAAGAGCAGGTTGTGACCCACTTGCTTGTGACTACTAAGCAGGATCTTTTATTCATCGTGGATATCAGTGAGATTTTACTTAAAAATGGCGAAGTGACAACCGATAGCCATATCAGGAGTCATCCTCGAGGAAAGCAAAGCAAAGAGCATATCACTGTATGGGAAAAGGGGGCAAAGCTGATTGGTGTTCTCCATGGTGATGAAGCAGCTGTCATAATGCAAACCACCCGTGGTAACTTGGAGTGTATCTACCCCAGGAAGCTGGTCCTTGTTTCAATTGTTCAGGCACTGGTTCAGGGACGTTTTAGAGATGCATTTGACATGGTAAGGCGCCATCGGATTGATTTCAATATGGTTGTTGACTACTGTGGCTGGAAATCTTTTATGAAGTCAGCGGCAGATTTTGTTAAACAAGTCAATAACCTTAGCCACATCACTGAATTTGTTTGTTCAATAAAGAATGAGAATGTCAGCAGCAAATTGTATGAGACCTACATATCATTTCCTGATCACTGTGCAACCTCTGTGGCTGATACTGTAAATTCTCATGGTCTGTTGTCAGACAACAAAGTCACATCTGTACTGATGGCAATTCGAAAAGCCCTTGAGGTGCAGGTGGAAGAAAGCTCATCAAGAGAACTCTGCATACTGACTACTTTAGCCCGTAGCGAACCTCCTCTGTTGGAGGAAGCACTGAATAGAATAAAAGTTATCCGAGAACTGGAACTTCTTGGGGTTGATGATGCCAGGAGAAAGCTCTACCCATCTGCTGAAGAGTCCCTGAAGCACTTGCTATGGTTAACCGAACCAGAAGCTGTTTTTAATGCTGCTTTGGGACTGTATGATCTGAATCTTTCTGCTATAGTAGCTTTAAATTCCCAAAAAGATCCAAAAGAGTTCCTTCCTTTTCTCAAGAGTCTTGAATGCCTTCCTCCTGCTATTATGAAGTACACAGTTGATTTAAGACTCGGAAGATATGAAAGTGCTCTCAAGAACATTGTTTCTGCTGGCGACGAGTATCATGAGGACTGTATGAAACTCCTCAACGCTAACCCTCAATTGTTCCCTTTGGGGCTCCAGTTATTCACTGACCCAGATAAAAGGCATCAAATTCTTGAGGCATGGGGTGATCAACTTTCTGAAGAGAAATGCTTTGCAGATGCTGCAATAACTTATCAATGCTGTTCGTCGTATCAGAAATCTTTGAAGGCGTATCGTGATTGTGGGGATTGGAGAGGTGTGTTCACTGTTGCAGGTCTTCTGAAGTTTAAAAAGGAAGAAATTCTTCAACTAGCACATGACCTATGTGATGAGTTCCAAGCACTTGGGAAACCAGGAGATGCTGCTAAAATAGCACTGGAGTATTGCTCAGATGTCGATAGAGGTGTTGGTTACTTTATCACGGCAAGAGAATGGGAAGAAGCTCTTCGGGTAGCTTATATGCACAGCAGGCAAGATCTGGTTGATACTGTTAGAGATGCAGCTTTGGAATGTTCTGCTTTGCTGATTTCTGAGTATCAGGAAGGATTGCTAAAGGTGGGTAAATATCTGGCCCGTTATGTTGCTGTACGGCAGAGGAGACTGTCACTTGCAGCCAAGCTCCAGTCTGAAGACCGATTTATGGATGTTGAAGACGACAGCATTTCAGAAGTCAGCACTAGCTTCAGCGAAATGAGTGCATATACCACAAGGTGTGTCATCTGCCATTTTTATCTGCGCATCCTCTCTGACCCAATTTTATCTTCTGTTTTTAGTTCTTTTTTTCACTATTTAGTTCCAAGTCCTCCTGCTTTAGGATCAACTGAAACTTCAATCAATGTTGAGTAACATTGTTGAACCCATACGAAATTCTAAATGCTGCTCGTGCAGGTCAACAAAGGAATCTAGTGCTTCCGTCATATCTAGCAGTGCCAGCAAGTCAAGAGGGGCAAGGCGACAAAAGAAAGGTGGCAAGATACGAGCTGGAAGGTAGGCGGCTTCTGTTGAGAGTTTTTTTTTTAAAATAAAATAAAATAAAATCCGAGTGGTTTCTTAAGACGTCAATTCTCCGTTTGTTTTTTCAACTCACCGTCAACTTTATTTGTGCAGCCCTGGGGAGGAGATGGCACTTGTGGAGCATCTCAAAGGGATGTCTCTGACCTCTGGTGCTCTAACTGAGCTTAAAAGCCTACTTGTGGTTCTAATACAACTGGGAAGAGAAGAAACCGCCCGTCAGGTGCAGCTGGCTGGAGACAATTTTGAGGTATCTCAAAGGGCTGCAGTCAAGTTGGCTGAGGATACTGTATCCAACGACAAGATAGACGAGAATGCACATACGCTTGAGAATTACGTGAAAATGCTGAGAGCTCATCAGTCAGCTGATAGTGAAACCACCTGTTGGCGAATCAAAGCATTGTCGCCGCCTTGGACCGGGGTATACTCCAATTCACATGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025949