BGIOSGA010294

From RiceWiki
Revision as of 15:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA010294

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010294, complete gene.

LocusTag

OJ1523_A02.4

Ensembl Transcript ID

BGIOSGA010294-TA

Ensembl Protein ID

BGIOSGA010294-PA

Length

4099

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25702408..25706506

Sequence Coding Region

25706379..25706506,25704228..25704366,25704030..25704152,25703903..25703946,25703705..25703830
,25702774..25702858,25702624..25702680,25702408..25702497

Genome Context

<gbrowseImage1> name=IndicaChromosome03:25702408..25706506 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:25702408..25706506 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATCAAATCAAATCAAATCCCCAAATCAAAGTTTACCAAAATTCCGTGGCAGAGGTCTCCCTCCCCTCCTCTTCTTGGAGTCGTCTCCTCGCGCAAGCCGCATCCCCTCCCCACAACTGGACCAGGATTTACATGGCTTCAAACGCTGGCAAGAAGCTCATTCAGATCGATGTGAGCTCTGATACGGTGTGCCCATGGTGCTTTGTCGGGAAAAAGAACCTCGAGAAAGCTATGGAGCAAAACAAGGACAAGTTTGATTTCGAGGTCCGCTGGCATCCATTCTTTTTAAATCCGAATGCACCTAAGGAAGGCATCAAGAAATCTGATTACTACCGGATGAAGTTTGGCCCTATTCAGTTTGAGCATGCAACTGCTCGTATGACGGAGATATTTAGAGGACTTGGGATGGAATATGACATGTCTGGGTTGATTGGAAATACAATGGACAGCCATAGGCTCATAACTCTTGCTGGGCACCAAGGTTATGACAAACAAAGTGCTCTTGTTGAAGAATTATTCCAAAGTTACTTTTGCCATGGAAAGTTTATTGGTGATCGGCAAGTTCTGCTGGATGCTGCAAGAAAGGTGGGCATAGAAGGAGCAGAAGAACTTCTTCAAGATTCTAACAAAGGAGTCGATGAGGTCAAGGAAGAACTCAACAAATATTCCTCTGGAATTTCTGGTGTTCCTCACTTTGTGATAAATGGGAAATTTCAGCTCAGCGGCGGCCAGCCTCCAAATGCATTCACAAGGGCTTTTGATGTTGCTGCAAAAGATGGGGCTCAATGA</cdnaseq>

Protein Sequence

<aaseq>MNQIKSNPQIKVYQNSVAEVSLPSSSWSRLLAQAASPPHNWTRIYMASNAGKKLIQIDVSSDTVCPWCFVGKKNLEKAMEQNKDKFDFEVRWHPFFLNPNAPKEGIKKSDYYRMKFGPIQFEHATARMTEIFRGLGMEYDMSGLIGNTMDSHRLITLAGHQGYDKQSALVEELFQSYFCHGKFIGDRQVLLDAARKVGIEGAEELLQDSNKGVDEVKEELNKYSSGISGVPHFVINGKFQLSGGQPPNAFTRAFDVAAKDGAQ</aaseq>

Gene Sequence

<dnaseqindica>1..128#2141..2279#2355..2477#2561..2604#2677..2802#3649..3733#3827..3883#4010..4099#ATGAATCAAATCAAATCAAATCCCCAAATCAAAGTTTACCAAAATTCCGTGGCAGAGGTCTCCCTCCCCTCCTCTTCTTGGAGTCGTCTCCTCGCGCAAGCCGCATCCCCTCCCCACAACTGGACCAGGTTCGGATCAACCCTCCAGCTCGATCCTATCCTCTCCCTCTCCCCTTTGAATGAAACCATCGATGCATACTTGCATATACTCTTGTCTGCTCTTCTGTTCATCCCAAGAAAACAGGCGGTTCTAATTTCTTCCAGTACAGTTGTTAGTTGTTTACTGCTCTCTAGGGATGCAAGAAACTGATCTTTACTGTGTGTTTTTTTTTCTTTACTAAACCAACAGGGGAACTTGCCAATTACTATATTTCAATAGGAAACTGATCTTTAATTAATTGATTGATCAATTGATACTTTGATAGTTACTACCTTTCTGTGTTTCATAGTTCTCCTTTATACTAGGCATAGCAGAGAAAGGCGCTGTTCTTGCGTTATTTATGCTGATGCCAGCCACAAGACATTTTCTTCCAAAGACTGATGATCATCGATTTATCATTGATATTGCCAACCGGTTGGCTAGATTAATACATTGGTGAGAAAAATTAGAGCAAGTGAGCAAAGATAGGAGAAGATGAACTACCATTTTCATTTTCTACAAGCCATGTTAATCCCCAATTCTGCACCTAAGTCAATTTTCAGTTATTTTAAATTTATTTTTCCTTTTTATTTGTTTTCTAAAACCAATTTTGCTTTTTGTTTGTTTGGCGTAGAGCTTAGTGATAACAAAACCATGGAGTCATAATCACGGTTTGTACAGCCTTTTTTTTTTTTTGCAGAGGAAACTTTCAGCCAATTTCTATTTTCAAAGAAAGGAAGGAACCCTGTTATAGATTAGAGAGAATCCCTTATATGCCACTCCAAATTAACCAGCTCCCTTATATACCACTTCAAATTGGCTTCTCCTTTTTATGCCACCGGTTCAAGTTTCTCCTCCCTTTTATGCCATTGCCGCCAGTCCACCGCTAGTTGACCGTTAACTTCATTGTAAAAAGACGCATTTGTCCTTGAGAATTAGTATACAACCAATAATATGTATTTTAGTACTAATATAGCTACTGGATACAATATATGAAAATTGATTTTTTTCTGCATCACATGCAATTTTAGCCATTACCATCACAAATAAATTTTCAATGTAAGCATGAAATATGCAGTTTTCCAATAATATTTTTAATATAAAGAGCATTTTCACTGGTTCTGATAAAATTTTGTTTACTCAAAAAGGATTTAAAATAAATTAGTTATGATTTTTTGAAGTTTACACATTTTTTAGTTGAGAGGGCATATTGGTCATTTACGAAAAAAACTAACCTTTTACTAACAGTCAACTAACACTATAGTGGTGGGAGTGGCATAAAAGGGTGGAAAAACTTAAACTAGTGGCATATAAGGGAGAAGCCAATTTTGAGTGGCATATAAGGGAACTGGTCAAATTCTAGTGGCATATAAGGGATTCTCTCTTAAAGATTAATATGTAATAGAATTTAGGTTACAAACACTTGGATAAGCAGCTAGTAGCCATGGCCAAAAACCAAAAGAAAATGCTAGGGCCATTACGAGGCTATGGGAGGACGATATAACATCGAATAATTAAGTCACCAAATTACACCAAACTGTTACATTGCTCACTTCCACTTATCAATGTTCTCGTTAATAAGAATGACACCGCATGGGCCTCAAGCTCCTCATTTTGAAAGGTCCTCATATCATGTTCCTCCCACATATGCCAACTGTATATGAGAACTTCATTGAGATGGTCTTCCACATCCCCAACTCTTTTAATTTTCTGACAGCCACTCTGGTTGGTGATTTTCTCCCACACAGTTGAAGATCAAATGTCTTTGCTGTTTCTAGTTGCAGATCGCATAGCAAATAAACCGTGTTTTGAGGCCATCTGCAGATCACTAGCTTGTGTGTTCGATGAAAAATTCGGATCACTAGCTTGACAGGTGTTAGGATCTTGGCCTGTACCAGCAACCATTCAAAATATTTACTTGTTTTCAGTCCTTGCTTTCCGGATCCATGAGGCGCCTTGATCCGATTTCTGATTAGCTTCTTTGTGAATAATACACATGCAGGATTTACATGGCTTCAAACGCTGGCAAGAAGCTCATTCAGATCGATGTGAGCTCTGATACGGTGTGCCCATGGTGCTTTGTCGGGAAAAAGAACCTCGAGAAAGCTATGGAGCAAAACAAGGACAAGTTTGATTTCGAGGTTTCACTTCAAAATTATTGTTGTCCAACTTCATGGTCATACAGCGTAAAACTAGCGTGTCTTTTTGCTGATTAGGTCCGCTGGCATCCATTCTTTTTAAATCCGAATGCACCTAAGGAAGGCATCAAGAAATCTGATTACTACCGGATGAAGTTTGGCCCTATTCAGTTTGAGCATGCAACTGCTCGTATGACGGAGGTTAATACATTTGAACAATGCAAAGGCAGAGTTTGTTCACATCATATATATCATATTCAGCCTTTTATTTGCTCTTTTTGCAGATATTTAGAGGACTTGGGATGGAATATGACATGTCTGGGTTGATGTAAGCTATAGTCTTGAATTTTTTTTTAGCATGCATCATTGGCTAGTTCGCTGATACAAATACTTAATACAGTGGAAATACAATGGACAGCCATAGGCTCATAACTCTTGCTGGGCACCAAGGTTATGACAAACAAAGTGCTCTTGTTGAAGAATTATTCCAAAGTTACTTTTGCCATGGAAAGTTTATTGGTGATCGGTGAGTATGTATTCAAGATTGTAGGAATGGATTTATAATCTTATTGCACTTTATTTTTCTTTGTCAATTCTGCATATTCGGTCATATATATTTGTGACAAACTATTATTGATTTAGAACATGTCAGAAATGGGACAACATGAGAAATCACATAAATCAGCCATACTTAATCGTTTTTCTATGTATGAGGCTTTCAGCAAGATGCATAATACATCTTTCCTGTTGGTAGTGGTACATTGAAGGGCGTGCATTTTTCTTTTCTGTGCTATATTACTCCTTGAGACAAACTCGTAATAAACACACTCATTTTATGTTGCTAAAATGAAGAATGACTGATGAAATTCCGAAAAGGAATATGTCAGACCTTTTCATATTGGAATCGTTATCTAGATTATCACATTCTACTATGGATGCGAGTTATTTAGAATGTTAAACCCAAGCAGATAGCACGTTGTGCATTTTCCGTTGTTACATGTGCTGCTTCAGTATTGGCAAATGAAAATAACCAACCAATTTCTTTGTTCTGGTGCGTAAGGGTTGTGAATAGTTTCTCAGCATTTACTATACTGCTGAAGTTTTTTCCTAGATGTCCCTTTTTAGGCACCTTTTCTTTATGCAAAGTTGCAGTCAGAAATGATTCCATGCTATCTATCAATGATAAATTTTTGTAGGAGTTTTGATGTTTGGGCAAGAAAAGTACCCTTTATCTTCTTGATTTGCTTCAGCAAACATGTCCACCTGCCAACTTAGCTACCCATCCTGCTTCCCTATATATATTTTTATGTTGACAATAAGTGATTTTATACAATATTATTCAATCTTGTGAATAATTTCCAAATGCTTGAAGGCAAGTTCTGCTGGATGCTGCAAGAAAGGTGGGCATAGAAGGAGCAGAAGAACTTCTTCAAGATTCTAACAAAGGAGTCGATGAGGTACATTTCCACCGATGTTCACTTCTAGTGACCATCTTTTTGTGACAGATGCAATCGAATCAAATATCCTAACATTTCTTTTGGGGATAAAAGGTCAAGGAAGAACTCAACAAATATTCCTCTGGAATTTCTGGTGTTCCTCACTTTGTGGTATGAGGACTAATTAAATGATCATATCTATCATCTCTTGCACTTTTTATCTTATCACTTGGTCAGTGACTGGATACTTGTCCATGATAATTCAAACTACTGTGTCTTTTTTTCTTTACTTTCCAGATAAATGGGAAATTTCAGCTCAGCGGCGGCCAGCCTCCAAATGCATTCACAAGGGCTTTTGATGTTGCTGCAAAAGATGGGGCTCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010294