BGIOSGA010381

From RiceWiki
Revision as of 15:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA010381

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010381, complete gene.

LocusTag

OsI_12344

Ensembl Transcript ID

BGIOSGA010381-TA

Ensembl Protein ID

BGIOSGA010381-PA

Length

3142

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23906225..23909366

Sequence Coding Region

23909355..23909366,23908953..23909070,23907900..23907979,23906225..23906473

Genome Context

<gbrowseImage1> name=IndicaChromosome03:23906225..23909366 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:23906225..23909366 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCTGCAGGAGGATTTTGAGGAGTACGCTGAGAAGGTGAAGACCTTGCCGGAGAGCACTAGCAACGAGGACAAGCTTATCCTCTATGGACTCTACAAGCAGGCCACCGTTGGAGATGTGAATACTTGCAAATCAAAGGAGGAAGCAATGAGCGACTACATCACCAAGGTGAAGCAACTCCAGGAGGAGGCTGCTGCTCTCAAGGCTCACCAGGCACAGCAGCAGCAGCATGTAGAACCCCAGCCCGGACCAGCATCCACCGCCGCCGCCACACCACTCGCCGCCGTACCGACCGGGTTTGATACTCCCTCCGTTTCAGTATCAGTGGAAATCTCAAGAAAATTCGATCGAAACATCTTGCAAACCTGCAAATTCAGTGGCCATGGATGCCCAGAAAAATTGCCGGGACAAAAGTCATCAAATTCCAGCGAGTTCTTGGTGGCTGGTGCCCACTAG</cdnaseq>

Protein Sequence

<aaseq>MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTCKSKEEAMSDYITKVKQLQEEAAALKAHQAQQQQHVEPQPGPASTAAATPLAAVPTGFDTPSVSVSVEISRKFDRNILQTCKFSGHGCPEKLPGQKSSNSSEFLVAGAH</aaseq>

Gene Sequence

<dnaseqindica>1..12#297..414#1388..1467#2894..3142#ATGGGTCTGCAGGTATAAAGAATTACAGATCACTCTCTCAATCCACCAACGTTACCGTTCTACGCTTAATACCGCTATAAAGATCAAATCTTTAACCATCGTTCAGTGAGTCTTGTCAAGATCTATGAGATGCAACCTTCTTGTTTAAGATGCTGCAATTATTCCGTGAATTGTAATTTTCCGTTGCTTTGCGAAGTGTAATTGGCTTAAGATTGGAACTTCTGAAGAAAGATTTAGCGTGACAGTGTGATTGAAGCATGATCTGCTAACAATTTGTGTCTGATATACAATTGTAGGAGGATTTTGAGGAGTACGCTGAGAAGGTGAAGACCTTGCCGGAGAGCACTAGCAACGAGGACAAGCTTATCCTCTATGGACTCTACAAGCAGGCCACCGTTGGAGATGTGAATACTTGTATGTATACCGAATATTTGGTATTGAGTATTCAGTTGTTACTTCTGTTTTTTCAGGCATGTTCTGGATGTGGAGCACAATTATTGAGTTACTAGCGTACTGTGTTTGATTTCATTCAGAGACGTACAGTTTACATGGCATGGATTATGATCCCTAACACAAGATCTCATAGATCGCTATGATTTTTTTTATCACTCCCCAAAAAATCTGTCTGATTTGAAACAATACCGTTCTTTCATAGAATCTTTCACATCAAATTTATGGTGTATTGGGTTCTTCCCCATATTTTTATAATAATTTGTGACTGCAACAATTGATATTGACCCGCACACTACAACAATTGATATGGAGTAGAAATTTGCTGCATCTAGCTTTTCATAGCTTTCCATGTTCAGTCTTCTACTGTGACTATGTCCTTTCACAACATGTTTGTGAAATCTTATAGTTTTTATCTATATTTTTGGTTTTGTGCTGAAAAGTAGAAGCTACTACATGGTACATGTGCTTTGACTATCTATTTCTTTGTATAACTTTTTTTTTTTACTAAATCACCCGCCAGGGGGGGGGGGGGGGGGCTCCCACCTGAATTTGTCATTGCAATGAGGGGGAGAACAAAAGTATTTCTTTGCCTAACTTGTAAAATCTCACTGCTCCTTCCAAATTTTGACTATCTATTGCCCTCTTGTCCCTTTTCTAATCAATCAGTCAATTTCTGATATGAATTTGACTCAGCTTGCCAACAGCTCTTCATATGGACTTGTCACGACGATGTTGCTTAGTATTTCCTTTTCTATAATCTTCTGAAGCTCGTCCTGGCATATTCGCCCAGAGGGACAGGGCGAAACATGGAAGGCTGTTGAAGGTCCATATGCTTCTCTCTGTCCTTACATAACTGTGTCTTCCTGTCTGTCCATTCTAATACTCTTGCCTGTTTCTCCGTGCTCCTGAACTGAATTTTTTGCATTCTTCGCAGGCAAATCAAAGGAGGAAGCAATGAGCGACTACATCACCAAGGTGAAGCAACTCCAGGAGGAGGCTGCTGCTCTCAAGGCTGTGTTTAGGGCCTATTTAGTTAGTGAAATGAATATTTTTGAGTGTCACATCGGACGTTTGACCAGATGTCGAAGGGGTTTTCGGACACAAATGAAAAAACAAATTGTATACTCGCCTGGAACCCGCGAGATGAATCTTTTGAGCCTAATTAAGCCGTCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATATTAGGCTCAAAAGATCCGTTTCGCGATTTACATGCAAACTATGCAATTGGTTTTTTTAATCTATATTTAATGCTCCATACATGTGTCCAAAGATTTGATGTGATGTTTTTACGAAAAGTTGGTGTGTCAAATTTTTTTTGACGTATACGGACACACATTTGAAGCATTAAACATAGACTAATAACAAAACAAATTACAGATTCCGCCTGTAAACTGTGAGACGAATCTATTAAGCCTAATTAATTCGTCATTAGTAAATGTTTGTTGTAGCACCACATTATCAAATCATGGCATAATTAAGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGCAATTGGTTTTTTTCGTCCATATTTAAGGCTCAAAAGCTGAACAAACTCTGTGCTATCTGGTTGCGCTTTCCATTCTATCCATTTGGGATGTGAACTACTCCCTTCATCGATATTTATTTTTGTTACTTACTTTATTATCCAAAGTACTTTAAACACAATTTTTCGGTTTTTATATTTGCACAAATTTTTTGAATAAGGTGGTCAAACAGTGCAAGCAAAAAGTCAAAATTCCTTATATTCCGAGACGGAGGGAGTATGTACCTCTTTGTGTACTGTTGCATAATTTATACATAAGTTTGTATGTGTAAAAAAGTTTGATGTGATGAAAAAGTTGAAAGTTTGAAGAAAAACGTTGGGAACTAAACAAGGCCTTAGTCCTATGGATCATAATATCCTGTAATCTTTCATCTCTCTGTCTGTGTACTGCACAATAGAAAAATAATGGTTGCCAAGCCAGTTACATGCCCCAATTTCAAGTGGTAATAAGCAGTAATAACCATCATATCCTGGATCATATTCCTATCTCAGAAGACAACACAATATAAAGAGAAAACAAATGTATTGATCAGAAGGCCAAAAACATATATATGAAAAATGAAAATGCTTAATTGTTCATAGTTAGATAGATCAACAACACTGCACTGCACACAAATATACTGTTTACTCATCATGTTCATTCATTCTACACATGCATGATCTCATCTGGCAATGGCAACTTGGCAAGAAGCCAAGAAATTCCTGCAAAAAAAATGAAATCTTCAGAGATGTCCATAGCCTAAGACCTGACCACCTGAGAAGAGGTTGAGGCAGAGCAGCCGAGCAGTGAAGCAGCCAGCAGCGTCCCTGGAATCCACAACCTGACACCCTCGTTGGCGAACATGGCGCACAGCACCAGGCACAGCAGCAGCAGCATGTAGAACCCCAGCCCGGACCAGCATCCACCGCCGCCGCCACACCACTCGCCGCCGTACCGACCGGGTTTGATACTCCCTCCGTTTCAGTATCAGTGGAAATCTCAAGAAAATTCGATCGAAACATCTTGCAAACCTGCAAATTCAGTGGCCATGGATGCCCAGAAAAATTGCCGGGACAAAAGTCATCAAATTCCAGCGAGTTCTTGGTGGCTGGTGCCCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010381