BGIOSGA011036

From RiceWiki
Revision as of 15:37, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011036

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011036, complete gene.

LocusTag

OS03G0268200

Ensembl Transcript ID

BGIOSGA011036-TA

Ensembl Protein ID

BGIOSGA011036-PA

Length

5245

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9509192..9514436

Sequence Coding Region

9514164..9514436,9513478..9513595),complement(9513330..9513388,9513125..9513189),complement(9512174..9512267
,9512002..9512082),complement(9511814..9511919,9511065..9511137),complement(9510634..9510989
,9510173..9510543),complement(9509650..9509923,9509496..9509566),complement(9509192..9509395

Genome Context

<gbrowseImage1> name=IndicaChromosome03:9509192..9514436 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:9509192..9514436 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGACCGCGCCGCGGGGAGCGGCGGCGGGGGAGGGGGAGGAAGCGGCGTGCGGAGGGTAGGGGACTACGTGCTGGTGCGGCAGATCGGGTCGGGGGCGTACGCGCGGGTCTGGCTCGGGAAGCACCGCACGCGGGGCACGGAGGTGGCCTTGAAGGAGATCGCCGTGGAGCGGCTTAGCAGCAAGCTCCGCGAGAGCCTCCTCTCCGAGGTCGACATCCTCCGGCGCATCCGTCATCCCAACGTCATCGCCCTCCACGAGTCCATCAGGGATGGTGGGAAAATATATCTTGTATTAGAGTACTGTCGAGGTGGTGACTTACACTCATACCTTCAGCAGCATAAAAGGGTTTCTGAAACAGTTGCTAAGCATTTCATCCAGCAGCTAGCATCTGGTCTGCAGATGCTGCGTGAAAACAACGTGGTTCATCGAGATCTAAAACCACAGAACATTCTTCTTGTTGCAAATAATGAAAATTCCCTCTTGAAGATTGCGGACTTTGGATTTGCAAAGTTTTTAGAACCTTCTTCTCTGGCTGAAACACTTTGCGGTTCACCGCTTTACATGGCTCCAGAAGTCATGCAAGCTCAGAAGTATGATGCAAAGGCAGATTTGTGGAGTGTTGGTATAATTCTATATCAACTTGTTACCGGATCTCCTCCTTTTACCGGGGATAGTCAAATCCAGTTGCTGAGAAATATACTCAATACACGAGAAATACGATTTCCATCTGATTGCGACTTGAGCCATGGCTGCATTGACTTATGCAGAAAGTTACTGCGAATCAATTCAGTGGAACGCCTTACCGTTGAAGAGTTTGTGAACCATCCATTTCTCGCTGAACATGCTTTGGAGAGAACCTTGAGCCGGACACCATCGGACATAAGAGATGGCTTTCCATTCATTAATAGCAGTCCTACGAGACCTTCAAGCCAAAGTTCACAGGAAGATTGTATGCCTTTTCCTTTGGATGATGAGTCAACTGGACAGGATGAAGGTCCTGTTTCTGATAGTAAGAGTGCAATAAAATCCTATGGGTTTGCCACGAGTAAAAGGCTTGATAAAACTTCAGGTCAGAGTCCAACGAAACATGCAAGTCTGGTCTCTAAATATATTAGGGGAAATAATTACGCATCTAGTAGTCAACGCCTGGACCATCCTAGGAGAATCAAGGAAAACAAGGGTGATGAAGGGCACAACCCTAAAGGTGGTTATCCAGAAGATTCCCCTATCATTGATTCATTAGAGTTTGTAGATCAGGAATATGTCTTTGTGCACCCAGAGGGATCCTCCTCTTCGATGAATGACTCCCGACAGCGCACCATGCCATCAAAACTTGACAGTTCTTCTCTTTCACCACCGAAGTTATTAACTGCTGTGAGTGCACCAAGGCCAATACATGGCATGGCAATTAACAGACAGCAATCTGGTGGAACTGGTAGCTTGGACAGTCACTGCTCTCCAGTATCTGGTACTTCACAAGGATCTGCAGATCTCAACGATGCTATGGATCAACCACCATCTGATTGTCTGACCAGGGTTAGATTATTGGAGCAGTATGCGTCTACCATAGCAGAATTGGTGAAAGAAAAGATTAAAGATGCCAAGCACTTAGAGGGATTCTCGATTCAGCTAGTTGTTCTTGCAACCTGGAAGCAAGCAATTTACATCTGCACTTCTTATGCATCTTCTGCCACAAGAGAGAGTCCTTCCCATGATGTCACCGCGAAGGGTTTTGGCTCAAATGCTCCCCATTTGCTTGCAAACTCTCAACTGTTATATGATACATGCATGGAGATAGAGAGTCAGTTTTTGGTTCAAATGGAATATGCTGAAGAACTTGCCAACACTATAGGACAGACAATTGATGCTACAGAAATGCCAGATGCGATAGAAATCATATTTCAGACCGCGCTTAACCTGGGAAGACATGGTGGTGTTGATGAGATGATGGGGAAATCAGCATCTGCCATGGTGCTGTACTCGAAGGCAGTATCCATGCTGCGCTTTCTCCTGACTGAGGCACCGTCACTCGCCCTGAACCCCGCTCTGTCCCTAACAAGAGATGATCGACGCCGCCTGCGCACATACATTGAAGCCGTTAACGCTAGGCTCGTCCCGTTGCAATACCAGCGGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MGDRAAGSGGGGGGGSGVRRVGDYVLVRQIGSGAYARVWLGKHRTRGTEVALKEIAVERLSSKLRESLLSEVDILRRIRHPNVIALHESIRDGGKIYLVLEYCRGGDLHSYLQQHKRVSETVAKHFIQQLASGLQMLRENNVVHRDLKPQNILLVANNENSLLKIADFGFAKFLEPSSLAETLCGSPLYMAPEVMQAQKYDAKADLWSVGIILYQLVTGSPPFTGDSQIQLLRNILNTREIRFPSDCDLSHGCIDLCRKLLRINSVERLTVEEFVNHPFLAEHALERTLSRTPSDIRDGFPFINSSPTRPSSQSSQEDCMPFPLDDESTGQDEGPVSDSKSAIKSYGFATSKRLDKTSGQSPTKHASLVSKYIRGNNYASSSQRLDHPRRIKENKGDEGHNPKGGYPEDSPIIDSLEFVDQEYVFVHPEGSSSSMNDSRQRTMPSKLDSSSLSPPKLLTAVSAPRPIHGMAINRQQSGGTGSLDSHCSPVSGTSQGSADLNDAMDQPPSDCLTRVRLLEQYASTIAELVKEKIKDAKHLEGFSIQLVVLATWKQAIYICTSYASSATRESPSHDVTAKGFGSNAPHLLANSQLLYDTCMEIESQFLVQMEYAEELANTIGQTIDATEMPDAIEIIFQTALNLGRHGGVDEMMGKSASAMVLYSKAVSMLRFLLTEAPSLALNPALSLTRDDRRRLRTYIEAVNARLVPLQYQRH</aaseq>

Gene Sequence

<dnaseqindica>1..273#842..959#1049..1107#1248..1312#2170..2263#2355..2435#2518..2623#3300..3372#3448..3803#3894..4264#4514..4787#4871..4941#5042..5245#ATGGGGGACCGCGCCGCGGGGAGCGGCGGCGGGGGAGGGGGAGGAAGCGGCGTGCGGAGGGTAGGGGACTACGTGCTGGTGCGGCAGATCGGGTCGGGGGCGTACGCGCGGGTCTGGCTCGGGAAGCACCGCACGCGGGGCACGGAGGTGGCCTTGAAGGAGATCGCCGTGGAGCGGCTTAGCAGCAAGCTCCGCGAGAGCCTCCTCTCCGAGGTCGACATCCTCCGGCGCATCCGTCATCCCAACGTCATCGCCCTCCACGAGTCCATCAGGGTACCCCGATCCTCGGATCAACGCCCTTCTACTGTTTATATTTTGCGCAATTGCGTTCGATTTGTTAGGATTTCATGCGGACGGCGACTGTTTATAAACCTCGGATGAATAAAATCGGGAGTTCTTATAGTCTCTCTTTTAGTTGAATTCTTCTGAGCTTTCTTGGTATTCAGATGCCTCAAGCAAAGGAGAACTCATTGGGCTTGACGTTCATTTGGGTGGTGATACTATGCAAAGTTTTAACTTAATGCTAGTACCATAGCGTAAGTTGTTTAACTTTGGATGTTTGTTCGCTGGCTGTGGAAGCAAAACATTAAAATTCCAAATTTGGTAACTTGTTTGTTTTGGATATATTTTCTGGTGGAATTTAGGAAACTATACCATTAGTTGTTCCCTCCTTAGAGTTCAAAAGCATACCTAACATGTTTAATTATGCCTCCGATATTAATATTTCTAGGTGTTCCACGAAAGGGAAGCTTCCCTCTAGGGAGATTGTTGGACATAATTATTTCTTCACTCTCATATCTAACTATTATTTGCGTATCTCTTTGTTATTTGATGATTTTAGGATGGTGGGAAAATATATCTTGTATTAGAGTACTGTCGAGGTGGTGACTTACACTCATACCTTCAGCAGCATAAAAGGGTTTCTGAAACAGTTGCTAAGCATTTCATCCAGCAGCTAGGCAAGCACTTTCTCAGAACCTCAGTGTCTTGCACTATTTATTGCTTTATCTCTCCCCAGAGCCAAAATCACATTCTCTTCTTTATGCAGCATCTGGTCTGCAGATGCTGCGTGAAAACAACGTGGTTCATCGAGATCTAAAACCACAGGTTAAATTATTTAATTTACTGTTATTGAGTGGATATTTCCATTATATCTTCATATTTAATGACAAAGAATTGATGAAAGAAACGGAATTTCCTGACATTTTGTTTTGTTTTCTATCCTGAATTTGTGGCTGTTCAAATAGAACATTCTTCTTGTTGCAAATAATGAAAATTCCCTCTTGAAGATTGCGGACTTTGGATTTGCAAAGTAAGTTACTTATGTTTGATTGCTTTTATTTTGGAGTTATATTATCTTATTTTCCACATGGCCTTTTTTATTGAGTTTATCAGCAATGAGTTTGATACCTGGTTTAAGAATCCCCTAATAGGTCTGTAGAAATCGCTCCTACCTGAAATGAAATTGCAGTATTGTGAAAGAAACGGTGTTGTGCATTTTAAAATGGAATAACTTCTCAAGAAGTTCTGAAAAAAATACAGTCAATTTGCACTATTTCAAAAGAAAAGGTGCATCATTTGAAAGTCTCATCTTCATGTCTTGAAAGATGTTAGAGACATTCCATTTAAAGAATGAAATATTATGTGCATCACTTTTTAGGCCCCCTTCAGGATTTGGCTCCACAACTGCAGCATGCCTTCATTGTTACAAAAAAATATTTCATGTACCAATACACCTATGTCGCATATGTATTACTCCAATTAAGCTATCATTGTTACAAAAAAAAAAAGCTATCTTGAGTCCAATTAATTCTCTACACTCAATTCTACTTTTTTTTTATTGAACAGTCCTACTCCGTAATGTAATGTCCTTTGAATTCACACAGAGTTTTACACAAAAATCTGTGCATAAAAGCTAAGTACGAAACATTCTTGAGGACAACTAGATAAGTATCGTGCAGGGAAAGAGAATAAGATCATGTTGCTTTGTGCTTGATCCTGTGTTTCTCTGCTTCCTTGCATATTTTATTACAGCCATGACAAAATTGGCACCTCAGCTTTCTCTCTGCTTCTCATTCATCGATGGTTGGATCAAGTGAGGCTTGGTGGGAGGGTTAGACGCGGATAGTATCAGAAATGTGTACTTACCTTTTCTATTCTTGCAAGCAGGTTTTTAGAACCTTCTTCTCTGGCTGAAACACTTTGCGGTTCACCGCTTTACATGGCTCCAGAAGTCATGCAAGCTCAGAAGTATGATGCAAAGGTCAGGGCTTTTTTCTGCTTCCTTGTGAGCTTTATCATGTACTTTTACCTGTTCTTGACTCGTGCTTCATGCCCGATTTCTGACAGAACAGGCAGATTTGTGGAGTGTTGGTATAATTCTATATCAACTTGTTACCGGATCTCCTCCTTTTACCGGGGATAGTCAAATCCAGGTTTATTCAAATTTTCCACATGACCTGATTTCTAGTGCATTATTAAATCAGGCTACTACTGAAAAATGTTATTTCCCATCAGTTGCTGAGAAATATACTCAATACACGAGAAATACGATTTCCATCTGATTGCGACTTGAGCCATGGCTGCATTGACTTATGCAGAAAGTTACTGCGAATCAATTCAGGTACGAATCCTCTGCTACACTTATGTATAGTTATATATAAAAACAAGTTTCATAAGACTTCCACATGTCATTATTTTTTCTTACATCCTTACCAGGAAGGGTAAAATTTTCCAGAATTATACTGTGACATGACTGATATTACGCCAAAGAAAAACATGAATGACTATCATTCAAGAGTAGACTTGGGTGGGTGACATTGTAATTAGTCCCTGTTTTCTCACCTATATTATTCACATGTGACCTTCTAGATGTAGTCTTGTAATCAGTATGTCTTACATGAAGACAGCTTAGAGATTTATTCGTGCTAGAAAAAAAAAAGGTTCTGCGTGTATAAAGCTGTTGCAGGAAATATGTTACACTCCATGGCATGCAGCAGGACACAACTCATGAACTATGCTGCACCCAAGGAAGTTTATATATTTGGTTGCTTCTCAGTAGTTTATCTGATCAACAATGTGTTAGAAGCCATTGCAGTTGTATGGTTTCTTCACTCGATCAGTTTATACCACTGCTTACTGTCTGTCGTAATCCTGAAACCCTGTGGGCTGTCGCACTTATAAAGCAACTTAAGTTTGTTCAAAAGTAGCAGATTAACTATCACTTTACATGATTATTGTTATGCTGACGTTACAAGTGAGAATTAATACTTAATGATTCTGTGCCAATATTAATGCAGTGGAACGCCTTACCGTTGAAGAGTTTGTGAACCATCCATTTCTCGCTGAACATGCTTTGGAGAGAACCTTGAGGTAATATATTCTTTGCTATAGTTTTACTTCTACAGCATCACGTGACATGTTTGATATTCTGTATTGCATTGACAGCCGGACACCATCGGACATAAGAGATGGCTTTCCATTCATTAATAGCAGTCCTACGAGACCTTCAAGCCAAAGTTCACAGGAAGATTGTATGCCTTTTCCTTTGGATGATGAGTCAACTGGACAGGATGAAGGTCCTGTTTCTGATAGTAAGAGTGCAATAAAATCCTATGGGTTTGCCACGAGTAAAAGGCTTGATAAAACTTCAGGTCAGAGTCCAACGAAACATGCAAGTCTGGTCTCTAAATATATTAGGGGAAATAATTACGCATCTAGTAGTCAACGCCTGGACCATCCTAGGAGAATCAAGGAAAACAAGGGTGATGAAGGGCACAACCCTAAAGGTGGTTATCCAGAAGGTATTGCAGTCTGTTGTGACTATCACATGTTTCATTATAATTGTGAAAAAGTTCTTACTAAATTTGTTATTTCCTTACTTGTAAATGTAGATTCCCCTATCATTGATTCATTAGAGTTTGTAGATCAGGAATATGTCTTTGTGCACCCAGAGGGATCCTCCTCTTCGATGAATGACTCCCGACAGCGCACCATGCCATCAAAACTTGACAGTTCTTCTCTTTCACCACCGAAGTTATTAACTGCTGTGAGTGCACCAAGGCCAATACATGGCATGGCAATTAACAGACAGCAATCTGGTGGAACTGGTAGCTTGGACAGTCACTGCTCTCCAGTATCTGGTACTTCACAAGGATCTGCAGATCTCAACGATGCTATGGATCAACCACCATCTGATTGTCTGACCAGGGTTAGATTATTGGAGCAGTATGCGTCTACCATAGCAGAATTGGTGAAAGAAAAGGTAACTTTCTTCTCAGTGGACTCAAATTTCCTTGCCTCCTTTTTGACTTCCTTCTGTTTAACATTGACCAAAGTTCTCATCCTTTTGATATGTTTGGATTCTCTGTCCAAAACATTGTGGTGAAGCTTATTTACCATATAAACTAAGGTCTTGTGTTTCATTCATCTGCCTGAGACAAGTCTTTATCTATGCAATTGCAAATGCTAACCATGCTTTTGTTTTGCTGATCAACCACCCAAACTTTTGTAGATTAAAGATGCCAAGCACTTAGAGGGATTCTCGATTCAGCTAGTTGTTCTTGCAACCTGGAAGCAAGCAATTTACATCTGCACTTCTTATGCATCTTCTGCCACAAGAGAGAGTCCTTCCCATGATGTCACCGCGAAGGGTTTTGGCTCAAATGCTCCCCATTTGCTTGCAAACTCTCAACTGTTATATGATACATGCATGGAGATAGAGAGTCAGTTTTTGGTTCAAATGGAATATGCTGAAGAACTTGCCAACACTATAGGACAGACAATTGGTATGTTACCTTGCCTAGGAGCTTTAAATCGTTGGTTGAACTTCTTGAATGCTGAATTGCTGATTGTGAGCTTATGCTTGCAGATGCTACAGAAATGCCAGATGCGATAGAAATCATATTTCAGACCGCGCTTAACCTGGGAAGACATGGTGGTGTAAGTCAATATCAAGCACACTGTCTTACATAGCAGAACGAAAGCTTGGTGTGCACTCTTATCCCACTCTTTTTGTGTGTTTTGTTATGCTAAATTGCAGGTTGATGAGATGATGGGGAAATCAGCATCTGCCATGGTGCTGTACTCGAAGGCAGTATCCATGCTGCGCTTTCTCCTGACTGAGGCACCGTCACTCGCCCTGAACCCCGCTCTGTCCCTAACAAGAGATGATCGACGCCGCCTGCGCACATACATTGAAGCCGTTAACGCTAGGCTCGTCCCGTTGCAATACCAGCGGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011036