BGIOSGA012220

From RiceWiki
Revision as of 15:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA012220

Description

Putative AUX1-like permeasePutative uncharacterized

Definition

Oryza sativa Indica Group BGIOSGA012220, complete gene.

LocusTag

OSRAU2

Ensembl Transcript ID

BGIOSGA012220-TA

Ensembl Protein ID

BGIOSGA012220-PA

Length

3495

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8172974..8176468

Sequence Coding Region

8172974..8173159,8173293..8173478,8173590..8173702,8173798..8173981,8174118..8174215
,8174888..8175353,8176127..8176468

Genome Context

<gbrowseImage1> name=IndicaChromosome03:8172974..8176468 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:8172974..8176468 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCGGCGGCTGACGGGAGCCTCGCCAACGAAAAGGCGCCGGCCGAGACGGTCGGCGTCGGCCGTTACGTCGAAATGGAGCAGGACGGCGGCGGACCCAGCACCGCAAAGTCCCGGCTCTCCGGCCTTCTCTGGCACGGCGGCTCAGCCTACGACGCCTGGTTCAGCTGCGCGTCCAACCAGGTGGCCCAGGTGCTCCTGACGCTGCCCTACTCGTTCTCCCAGCTGGGGATGCTCAGCGGCATACTGTTCCAGCTCTTCTACGGGCTGTTGGGCAGCTGGACGGCGTATCTCATCAGCATCCTGTACGTGGAGTACAGGACCAGGAAGGAGAGGGAGAAGGTGGACTTCAGGAACCATGTCATCCAGTGGTTCGAGGTGCTGGACGGCCTGCTGGGGAGGCATTGGAGAAACGTCGGCCTGGCCTTCAACTGCACCTTCCTACTCTTCGGCTCCGTCATCCAGCTCATCGCCTGCGCTAGCAACATCTACTACATCAACGACAAGCTGGACAAGAGGACGTGGACCTACATCTTCGGCGCGTGCTGCGCGACGACGGTGTTCATCCCGTCGTTCCACAACTACCGGATCTGGTCATTCCTCGGCCTCGTCATGACCACCTACACGGCCTGGTACCTCGCCGTCGCCTCCCTCATCCATGGCCAGGTCGATGGAGTGAAGCACTCGGGCCCAACAAAGATGGTCCTCTACTTCACCGGGGCCACAAACATTCTCTACACCTTCGGTGGGCACGCTGTTACTGTGGAGATCATGCACGCGATGTGGAGGCCGCAGAAGTTCAAGGCGATCTACCTGATGGCGACGCTGTACGTGCTGACGCTGACGCTGCCGTCGGCGGCGAGCGTGTACTGGGCGTTCGGGGACGAGCTGCTCACGCACTCGAATGCGCTGGCGCTGCTGCCGCGCACGGCGTTCCGGGACGCCGCCGTGGTGCTCATGCTCATCCACCAGTTCATCACCTTCGGCTTCGCCTGCACGCCGCTCTACTTCGTCTGGGAGAAGCTCATCGGACTCCACGACTGCCGCAGCCTCTGCAAGCGCGCCGCCGCGAGGCTCCCCGTCGTCGTGCCCATCTGGTTCCTCGCCATCATCTTCCCCTTCTTCGGGCCCATCAACTCCGCCGTCGGCTCCCTCCTCGTCAGCTTCACCGTCTACATCATCCCCGCCCTCGCGCACATGATCACCTTCCGCTCCGCGCACGCTCGTGAGAACGCCGTGGAGCCGCCGCCGCGGTTCGTGGGGCGATGGACGGGCACGTTCATCATCAACGCGTTCGTGGTGGCGTGGGTGCTGGTGGTCGGCTTCGGGTTCGGCGGCTGGGCCAGCATGACCAACTTCGTCCGCCAGATCGACACGTTCGGGCTCTTCACCAAGTGCTACCAGTGCCCGCCGCCCCCTCTGCCGCCGGCGGGCGCCGCTCCGAACGCCACCTGGCCGCCGTTCCCCGCGACGCCGTTCAACGCCACCACCGCCGGCCTCGCTCCGGCCCCTGCTCCTTCGCCGGCGCATTTCTTCGGCCGCCACCACCGGCATCACAGCCACGGGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSAADGSLANEKAPAETVGVGRYVEMEQDGGGPSTAKSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLAVASLIHGQVDGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIYLMATLYVLTLTLPSAASVYWAFGDELLTHSNALALLPRTAFRDAAVVLMLIHQFITFGFACTPLYFVWEKLIGLHDCRSLCKRAAARLPVVVPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMITFRSAHARENAVEPPPRFVGRWTGTFIINAFVVAWVLVVGFGFGGWASMTNFVRQIDTFGLFTKCYQCPPPPLPPAGAAPNATWPPFPATPFNATTAGLAPAPAPSPAHFFGRHHRHHSHGL</aaseq>

Gene Sequence

<dnaseqindica>1..186#320..505#617..729#825..1008#1145..1242#1915..2380#3154..3495#ATGGGCTCGGCGGCTGACGGGAGCCTCGCCAACGAAAAGGCGCCGGCCGAGACGGTCGGCGTCGGCCGTTACGTCGAAATGGAGCAGGACGGCGGCGGACCCAGCACCGCAAAGTCCCGGCTCTCCGGCCTTCTCTGGCACGGCGGCTCAGCCTACGACGCCTGGTTCAGCTGCGCGTCCAACCAGGTGACCACATTTTCTGATCGACGCTATGCTTGCTTCCATTTTCTTGCGAAATGCATGCAATCTAAGGTAGGTTTGTGCCGTGATCGATGTGTAGCCGTTCGGTTAAATCTGCATTGCTGTGTGCTTCGATCAGGTGGCCCAGGTGCTCCTGACGCTGCCCTACTCGTTCTCCCAGCTGGGGATGCTCAGCGGCATACTGTTCCAGCTCTTCTACGGGCTGTTGGGCAGCTGGACGGCGTATCTCATCAGCATCCTGTACGTGGAGTACAGGACCAGGAAGGAGAGGGAGAAGGTGGACTTCAGGAACCATGTCATCCAGGTAAACAAAAACTACATTGTTCAAATCCATTTCGCCGCCGTACGGTCTTCTCTTCTCTGTATGTTCTGTAAGTTCAGACCCTGAAGACCTCAACCATTGATGTGCATGCAGTGGTTCGAGGTGCTGGACGGCCTGCTGGGGAGGCATTGGAGAAACGTCGGCCTGGCCTTCAACTGCACCTTCCTACTCTTCGGCTCCGTCATCCAGCTCATCGCCTGCGCTAGGTACGTACCTGCAGCTACTAAAGCCACTGAAGTCTGAATGTACTCATTAGTATCTGTTTTAGCGTCTGTTTTATGTGTACAATGTGTGAGTGCAGCAACATCTACTACATCAACGACAAGCTGGACAAGAGGACGTGGACCTACATCTTCGGCGCGTGCTGCGCGACGACGGTGTTCATCCCGTCGTTCCACAACTACCGGATCTGGTCATTCCTCGGCCTCGTCATGACCACCTACACGGCCTGGTACCTCGCCGTCGCCTCCCTCATCCATGGCCAGGTAGTACAACACAAAAGCACCATCTGTTAGCATGCAGCATGCTTGCATTTCTCGTCTGAATAGCGAGGCGCATGCCTGAACATTATTACATTGCGTTGTGCTGAAAAAACACTTGTGTTTTTTGTATGAATATCAGGTCGATGGAGTGAAGCACTCGGGCCCAACAAAGATGGTCCTCTACTTCACCGGGGCCACAAACATTCTCTACACCTTCGGTGGGCACGCTGTTACTGTGTAAGCCGACAAACGCTCTCTATTCTATGCCCCTGTGTCAAAAGGAACACTGCACGAAATGGTCTCAGTCACATGCCACACCGTAGAGAGTACCGTAGGCTGCAAATTTTCTTTTCTGAAACTGCACAAATTCAACAAGCCAGCACATTTCAGAAAAGCAACTACGACTCGAATCAAAGCATCTACCCCGCACCGTTGCATCTTTGGCAGCGAACCCATGCACTCCCATTTCCAGGCTACACACTGGCAGGAGGAGTACTCCTCTGCTCATTCATTCATGGTTTGGACAGTCAAAAGAGCTATAGCTAGCGTCCAAACTCGGGAGAGCATTTGCTGCTTTACCTCAGGGTGGCTCCTGCGGCCTGCGCCTGCATTGCTGTAGATACGATGCCCATCCTGCCATCCACCACGGACCACGGATGGACAACGCCACGAAACATGCACGGACAAGGCACGGATGTCCACGTAACTCTGTACCGTGTACCCACGCTACGAGCTAGCAGTACAGTAAGGCAAAGGCAATAACGCCACGCCTCCGCTCTCAGTATCTGGTCACCCTCCTTGCAGGCTCGCAGTTACATCGATCGTTTACAGCAGCGTCAATACTGTAATAATTGACCAAACTGTCAAAGCAGTTTGTGACAACATTACGTGTGATTTTGGTGCGCGCAGGGAGATCATGCACGCGATGTGGAGGCCGCAGAAGTTCAAGGCGATCTACCTGATGGCGACGCTGTACGTGCTGACGCTGACGCTGCCGTCGGCGGCGAGCGTGTACTGGGCGTTCGGGGACGAGCTGCTCACGCACTCGAATGCGCTGGCGCTGCTGCCGCGCACGGCGTTCCGGGACGCCGCCGTGGTGCTCATGCTCATCCACCAGTTCATCACCTTCGGCTTCGCCTGCACGCCGCTCTACTTCGTCTGGGAGAAGCTCATCGGACTCCACGACTGCCGCAGCCTCTGCAAGCGCGCCGCCGCGAGGCTCCCCGTCGTCGTGCCCATCTGGTTCCTCGCCATCATCTTCCCCTTCTTCGGGCCCATCAACTCCGCCGTCGGCTCCCTCCTCGTCAGCTTCACCGTCTACATCATCCCCGCCCTCGCGCACATGATCACCTTCCGCTCCGCGCACGCTCGTGAGGTATAGTAAAAATCTTGCCATCTTTTTAATCACTGCGCTTTTTTTTTAACCTTTTGGTTTCACTTTTATCATGCGAGTTTACTAGTGTAGGACTTGCATGTCGCATTGCACTTTACATTGGCACGCCAAAGCTAGCTAGGTACTGATTAGATGCCACTTAGCACAGTGGTTATACATTTATCAAGTGAGTTAGACGAATGCTAGTTGGGTCCACCCTTGTTCGGGATGGACTATGGAAAGATGCTGATACAAAAGGTAACCTTGGTTATGATCAAGGGTGAAACATCATTAGGGTGGTAAGTATTGCCGCTGTTTTTGTCGTACTGAATGTAAGACAAAACTGCGGCAGTGTTGATCTGTCTTTTAACGTGGCAAGAAAAGCAAAAGGGTGCTAGTACCAAGCTTAGAAGTAGACTGTTGAGGAAAAACAGGAGACAGAGGGCTCTTTTGTACCATTCGTCCTGGTATATTTGGACGAGCATCGAACCACTCTCTTTGCAAGACGACACAAAAAAAAGTTCAGTATTACTTTCTCTGTTTCACAATGTAAGTCATTCTAGCATTTTTCACATTCATATTGATGTTAATGAATCTAGACATATATATATATATATGACTTATATTATAAAACGGAGTTAGTAGCAAATTTAGAAGTCATGTGATTTGTACTCAGTACTACATTTTAATGGAGTACAAGCTAGTAGCTGTGTGCTCTGTTGTTGTGATGGTGTGAGCCTGAACTGAGAATCCTTTGTCTGAATGCTAAACTGCAGAACGCCGTGGAGCCGCCGCCGCGGTTCGTGGGGCGATGGACGGGCACGTTCATCATCAACGCGTTCGTGGTGGCGTGGGTGCTGGTGGTCGGCTTCGGGTTCGGCGGCTGGGCCAGCATGACCAACTTCGTCCGCCAGATCGACACGTTCGGGCTCTTCACCAAGTGCTACCAGTGCCCGCCGCCCCCTCTGCCGCCGGCGGGCGCCGCTCCGAACGCCACCTGGCCGCCGTTCCCCGCGACGCCGTTCAACGCCACCACCGCCGGCCTCGCTCCGGCCCCTGCTCCTTCGCCGGCGCATTTCTTCGGCCGCCACCACCGGCATCACAGCCACGGGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012220