BGIOSGA013958

From RiceWiki
Revision as of 15:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013958

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013958, complete gene.

LocusTag

OSJNBA0015N08.20

Ensembl Transcript ID

BGIOSGA013958-TA

Ensembl Protein ID

BGIOSGA013958-PA

Length

2167

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40292223..40294389

Sequence Coding Region

40292223..40292235,40292351..40292490,40292824..40293209,40293315..40293495,40293882..40293974
,40294051..40294190,40294290..40294389

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40292223..40294389 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40292223..40294389 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCTCAAGAAGAGAAGACGAGCGTCAAGTCGGAGGAGGCCTCGTCGGCGGCGGAGGAGCAGCCACCTCAAGCTGCAGCTCCGCCGCCGCGCAGGGGTGTGCCGCCGGCCAACCCCTTCGACTTCTCAACCATGATGAACTTGCTCAATGATCCGAGCATAAAGGAGATGGCGGAGCAGATCGCCAAGGACCCGGCGTTCACGGAGATGGCGGAGCAGCTGCAGAAGACGGTGCAGTCGCCGCCGGCGCGGGGGGCGGCGCAGGAGGCTGCGGCGGCGGCGGCGCCGGCGCTGGACCCGAGCAAGTACGTGTCGACGATGCAGCAGCTGATGCAGAACCCGCAGTTCGTGGCGATGGCGGAGCGGCTGGGCAGCGCGCTGATGCAGGACCCGGCCATGTCGTCCATGCTTGGCGGCCTCACCAACCCCGCCCACAAGGAGCAGCTCGAGGCCCGCATCGCCCGCATGAAGGACGACCCCTCCCTCAAGCCCATCCTCGACGAGATCGAGAACGGCGGCCCCGCCGCCATGATGAAGTATTGGAACGACCCTGAAGCGCTGCAGAAGTTCGGGAGGGCGATGGGCGTCGGCCCGTCGGGCGAGGGCGCGGCGGCGGCCGGCGGCGAGCACGAGGAGGCGGAGGAAGAGGGCGGGGAGGAGGGCGAGTACGAGGACGAGTCCGTCATCCACCACACTGCCAGCGTCGGCGATGTCGAGGGCCTGAAGAAAGCATTGGAGGAAGGCGTGGACAAGGACGAGGAGGATTCGGAAGGGAGGAGAGGCCTGCATTTCGCTTGCGGCTATGGCGAGCTGAAATGCGCGCAGGTTCTCCTGGAGGCCGGCGCGGCCGTGGACGCGGTGGACAAGAACAAGAACACGGCGCTGCACTACGCCGCCGGCTACGGCCGCAAGGACTGCGTCGCCCTCCTGCTCGACCACGGCGCCGCCGTGACGGTGCAGAACCTGGACGGGAAGACGGCCATCGACGTGGCGAAACTCAACAACCAGGAGGAAGTCCTCAAGCTGCTCGAGAAGCACGCCTTCGTATAG</cdnaseq>

Protein Sequence

<aaseq>MASQEEKTSVKSEEASSAAEEQPPQAAAPPPRRGVPPANPFDFSTMMNLLNDPSIKEMAEQIAKDPAFTEMAEQLQKTVQSPPARGAAQEAAAAAAPALDPSKYVSTMQQLMQNPQFVAMAERLGSALMQDPAMSSMLGGLTNPAHKEQLEARIARMKDDPSLKPILDEIENGGPAAMMKYWNDPEALQKFGRAMGVGPSGEGAAAAGGEHEEAEEEGGEEGEYEDESVIHHTASVGDVEGLKKALEEGVDKDEEDSEGRRGLHFACGYGELKCAQVLLEAGAAVDAVDKNKNTALHYAAGYGRKDCVALLLDHGAAVTVQNLDGKTAIDVAKLNNQEEVLKLLEKHAFV</aaseq>

Gene Sequence

<dnaseqindica>1..13#129..268#602..987#1093..1273#1660..1752#1829..1968#2068..2167#ATGGCTTCTCAAGGTCAAAAGAACTGATTTGCTGTTTATTTCTTCAATTCTTTCTTTCTTGTTTGATTTGCTCCGGCTCAATTCTTTCTGATACTGATAAGAGACGACATGAGTAATTGTGTGCGCAGAAGAGAAGACGAGCGTCAAGTCGGAGGAGGCCTCGTCGGCGGCGGAGGAGCAGCCACCTCAAGCTGCAGCTCCGCCGCCGCGCAGGGGTGTGCCGCCGGCCAACCCCTTCGACTTCTCAACCATGATGAACTTGCTCAATGTAAGCTTACCTCGCTGCTGACTTATTTCACTAATTGCCTACTCGTTTGAGCGTAATTTCCTCAACTATATTTTGGGTATAATCTCCTCTTGAACCTAAGTTATCCGATAATTAATTAATTATCAGTTACCTGTTCAAGATTGAGTTAATTAAGCAACTCACTATATAACCAACCAGGTGTTGTTGCTTATTAGCTGAGATGGAAGCTGGATTGATTAATTATACAGTTCATGCAATTACTAGTAATAATTAGTGAGTCCATTGATGAAATGATGAGCAGAAAAAATAATTAGATATGAATAATCTGCATGGTAATTTGTTTGTTTGGAGCAGGATCCGAGCATAAAGGAGATGGCGGAGCAGATCGCCAAGGACCCGGCGTTCACGGAGATGGCGGAGCAGCTGCAGAAGACGGTGCAGTCGCCGCCGGCGCGGGGGGCGGCGCAGGAGGCTGCGGCGGCGGCGGCGCCGGCGCTGGACCCGAGCAAGTACGTGTCGACGATGCAGCAGCTGATGCAGAACCCGCAGTTCGTGGCGATGGCGGAGCGGCTGGGCAGCGCGCTGATGCAGGACCCGGCCATGTCGTCCATGCTTGGCGGCCTCACCAACCCCGCCCACAAGGAGCAGCTCGAGGCCCGCATCGCCCGCATGAAGGACGACCCCTCCCTCAAGCCCATCCTCGACGAGATCGAGAACGGCGGCCCCGCCGCCATGATGAAGTAAGCATAGTTGCAATTGGCGCCATGGCTGGTTGAGTTCGTCGTCGTCGTCGTCGTCGATCTCGAAAGCAAATGAGCAATGGCAATACTTGTTGCTTCCTTCAGGTATTGGAACGACCCTGAAGCGCTGCAGAAGTTCGGGAGGGCGATGGGCGTCGGCCCGTCGGGCGAGGGCGCGGCGGCGGCCGGCGGCGAGCACGAGGAGGCGGAGGAAGAGGGCGGGGAGGAGGGCGAGTACGAGGACGAGTCCGTCATCCACCACACTGCCAGCGTCGGCGATGTCGAGGTCTCTAAATCAATTCTCACTTCTATTACTGCCTACTCTCTCCTTTTCAAGACAAGATGGTGAAAATCAAACCATTTTAAATTTAACTAAATTATAGACAAATATAGTAATATTTATAATACTAAATTAGTTTTTTTCTTGATTATTTATAGAGTAATATTTACAATACAAAATCAATAATTGAATATATTCGCATAATAAATTTGTTTAGGATTGAAAATGTTATTATTTTTTTCTATAAACTTGTTTAAATCTAAAGCTGTTTCACTTTGATTAAATTTAAAACGTTTTACAATCTGAAACAGAGGGAGTACTAATTATGCGCATTTGCTCAAGTAAAATCTGCATCTTTTCCTTCATCTTCAACACGCATTGGCATCGTTCAGGGCCTGAAGAAAGCATTGGAGGAAGGCGTGGACAAGGACGAGGAGGATTCGGAAGGGAGGAGAGGCCTGCATTTCGCTTGCGGCTATGGCGAGGTAAGCATCATGCATGCAGTTCTCAGTGAACATCTTGTTCAGTTATCTGATCGATTCGTTGCTTGTGTTTGCGCAGCTGAAATGCGCGCAGGTTCTCCTGGAGGCCGGCGCGGCCGTGGACGCGGTGGACAAGAACAAGAACACGGCGCTGCACTACGCCGCCGGCTACGGCCGCAAGGACTGCGTCGCCCTCCTGCTCGACCACGGCGCCGCCGTGTAAGTCCATCGCATCTGCAATTCTGCATGCATATGCCCATGCCATCCATCAATGGACATCTGACTGAAACTAACCCGGTTTGGTTGTGCAATGTGCAGGACGGTGCAGAACCTGGACGGGAAGACGGCCATCGACGTGGCGAAACTCAACAACCAGGAGGAAGTCCTCAAGCTGCTCGAGAAGCACGCCTTCGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013958