BGIOSGA014731

From RiceWiki
Revision as of 15:58, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA014731

Description

cDNA, clone: J043005G13, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA014731, complete gene.

LocusTag

OSIGBA0157K09-H0214G12.21

Ensembl Transcript ID

BGIOSGA014731-TA

Ensembl Protein ID

BGIOSGA014731-PA

Length

6678

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24294442..24301119

Sequence Coding Region

24301060..24301119,24299772..24300012,24297468..24297687,24296908..24297307,24296493..24296600
,24295989..24296189,24295741..24295839,24294736..24294903,24294442..24294630

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24294442..24301119 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24294442..24301119 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGCGACCAGGCCCTTTGACCGAATGGCCATGGCAATGGATGGGGGGCTACAAGTACCTGGTCCTGGCTCCTGTGGCCATGCACACGGCACACAGGTTGGCCACCAAGGGGTGGGGAGACTTTGACCCAGCGTACACTTTCATGTTGCCAACTCTGCTGCTGAGGATGATCCACAACCAGATCTGGATCAGTTTGTCTCGATACCAGACTGCTCGCAGGAAGCACCTCATTGTTGATCGCAGTCTCGACTTCGAGCAGGTGGACCGAGTATTATACTTGGCATGGGCACGGGCAGCTGTCATCCATCCGTTTGCTGAACATTTAGCCTATTTCCTGCTATTTTCAATCTCCATATTGCCGCCAATTTTTATGGGCTGTGGTTCTGTCCTGGCTGGTGTCTTGTACATTACTTACATTGATTTCATGAATAACATGGGCCACTGCAATTTTGAGCTGATGCCAAAGTGGATGTTCCAAACTTTTCCTCCTCTCAAGTATCTCATATATACTCCATCGTTTCACTCTCTCCATCATACCCAGTTCCGTACAAACTACTCATTGTTCATGCCATTCTATGACTACATTTACAACACCATGGATAGTTCAAGTGATGAGTTGTATGAGAGATCATTGAAAGGAACAGAGGAAACACCAGATATTGTTCACCTGACACATATGACTTCCTTGAAATCAACGTATCATCTAAGGATTGGGATTACTTCCATATCATCTAAACCATGCAATGACTCAGTGTGGTATATGTGGATGCTATGGCCTGTTGCGTGGTTATCAATGGTACTGGCATGGATTTATGGATCTTCAGCATTTGTTGTCGAGAGACTAAAACTGAAGAAGTTCAGCATGCAAGTATGGGCACTACCAAGATACAACTTCCAAGTAATGGATTCATCCGCATATGGCTTGTCTTGGGAAAGTAAGTCCATCAACAACTTGATCGAGAAGGCAATATTAGATGCTAATGAAAAAGGGGTCAAAGTGCTCAGTCTAGGACTTCTAAATCAGGCAGAACAACTCAATGGAAGCGGTGAATTGTTTGCCAAAAAATATCCAAGATTAAGGGTACGACTTATTGATGGAAGCGGCTTAGCAACTGCCGTGGTGCTCAATAGCATACCTTTTGGTACAAAGCAAGTTTTTCTCTGTGGAAGTAATTCTAAGGTGACCCGTGCAACAGCCATAGCTTTATGTCAGAGAGGTGTCCAGGTAATCCTGAATCAAGAGAAAGAATATGGAATGCTCAAGTCTCGAGTTCCAGAGAGTAGAGCTATCTATCTGAAATTCTCTAATGATGAAACACCACAGATTTGGATAGGAGATAGCATAGACGATGCACAAGGGAGGGCACCAAAGGGAACTATATTTATTCCCACGTCACAGTTCCCCCTTAAGAAGGCACGCAAGGACTGCACTTACTTGAGTAACCCAGCAATGAAGATCCCAGAGACAATGCAGAATGTCCACACCTGTGAGAATTGGCTGCCAAGAAGGGTGATGAGTGCATGGCGCATTGCTGGAATATTGCATGCTTTAGAAGGTTGGGAAATGCATGAATGTGGAGATGATATGATGACCATTGAGAAGACTTGGTCGGCAGCTATTAAGCATGGATTCAAACCTCTGACAAAACCTTGCTCTCTGAATTCTGGAACGGACCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MATRPGPLTEWPWQWMGGYKYLVLAPVAMHTAHRLATKGWGDFDPAYTFMLPTLLLRMIHNQIWISLSRYQTARRKHLIVDRSLDFEQVDRVLYLAWARAAVIHPFAEHLAYFLLFSISILPPIFMGCGSVLAGVLYITYIDFMNNMGHCNFELMPKWMFQTFPPLKYLIYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDSSSDELYERSLKGTEETPDIVHLTHMTSLKSTYHLRIGITSISSKPCNDSVWYMWMLWPVAWLSMVLAWIYGSSAFVVERLKLKKFSMQVWALPRYNFQVMDSSAYGLSWESKSINNLIEKAILDANEKGVKVLSLGLLNQAEQLNGSGELFAKKYPRLRVRLIDGSGLATAVVLNSIPFGTKQVFLCGSNSKVTRATAIALCQRGVQVILNQEKEYGMLKSRVPESRAIYLKFSNDETPQIWIGDSIDDAQGRAPKGTIFIPTSQFPLKKARKDCTYLSNPAMKIPETMQNVHTCENWLPRRVMSAWRIAGILHALEGWEMHECGDDMMTIEKTWSAAIKHGFKPLTKPCSLNSGTDL</aaseq>

Gene Sequence

<dnaseqindica>1..60#1108..1348#3433..3652#3813..4212#4520..4627#4931..5131#5281..5379#6217..6384#6490..6678#ATGGCGACGCGACCAGGCCCTTTGACCGAATGGCCATGGCAATGGATGGGGGGCTACAAGGTATGCCAAGAATTTGCCAGCATGTCCTACTCCTTCCATACAGGATGTCTTGTTCGAGAAATATATTAAACCAACTCCAATCCATTTACCAATTAACATGCTATTAGAGGATTGCACAAACCATCATCGTTTAGTTTTCGATTTTTCATGAATATATTGATGGATGAATTAGTCGTCGTCGTTCTTGTTTCTTTAGTACCCTTAGTAGTTCCTATACCGGTCATATTTCTTGGGTTATTTACAAGCGGTATTCAAGTAATGCGTGATCATAATAATGTCTAGTTGAAGGAGATCAAGAGAATTAATCAATATTAGTTGAAATATTATCAAGGAAAAACTAATCATTACCAGAATGATGGCTTGAACATGAATTTGAGCCACACGGGGTTCTGAAACAATGGAAGGTCTCCATGCATTGTCAATTAGGGATTGCAGCAAATTTGATTTCCATAGGGTCAACAATTGGACCATGCTCAAGCATATCCTAACAAGTTATTGGAACCGCATACGTTGCATAGATATAGATCAGAAGCTGTCTTTCTCGTGTTCGTGCATTTTTGGCCCGCAGATTATTTTCAAATTGTGTAGTTACCTCACTTAGCCATGATATGATTTCTTGTTAGTCCAACAATATATTCCATCTCCACACCCAGAAAAAAAATGCTTCAAGAAAACGATGGAAGTAAACCATGGTGCCAATCATTCGCCCAAAATATATGGCAGGTTTCTTTGCTTGCATGATCTGATCAATACTGACAGTACCATCGTCCAACATGTGCCCAATCTCCTCTGTTGACGTCTCAGATTCTTTGGCTCAATAAGTTGCACAATCGCCAAATGACATAAGTACCAGCCGTCTAAATATGGCAGTAGCTGTACATTTCAAGCAGTTTCATGATTCAACTGAACTGACACTGTAAACTGCAAATCCACGGTGATAAACTTGATGACGATCAACTGAAAAACCTTTCAAAGACAAGATGTCATTCCAACATAATTTGTTCCCACCACCCAGTACTTGACCGAATGCTTTCTGTCCATGCACAGTACCTGGTCCTGGCTCCTGTGGCCATGCACACGGCACACAGGTTGGCCACCAAGGGGTGGGGAGACTTTGACCCAGCGTACACTTTCATGTTGCCAACTCTGCTGCTGAGGATGATCCACAACCAGATCTGGATCAGTTTGTCTCGATACCAGACTGCTCGCAGGAAGCACCTCATTGTTGATCGCAGTCTCGACTTCGAGCAGGTGGACCGAGTATTATACTTGGCATGGGCACGGGCAGGTATGCGATGCCCAAGTAATCCTTGCGTTGGTGGGAAATATCTCCACTGCAGGCAAATCTACTCGTGTTAATTGAAATGATGATTGATCCTTGCTATTATGTGCAGGGATGATCAGATCATCTTGAACGGACTTCTGTTCTACCTGGGCTACGCAATCATCCCGAACTTTCGCCTAATGCCAGTGTGGAGAACCAATGGAGCCCTCATCACTATCTTGCTTCACATGGGACCTGTCGAGTTCCTCTACTACTGGTTTCACAGGGCACTGCACCACCATTTTCTCTACTCGCGTTACCACTCGCACCACCACGCATCCATCGTCACTGAGCCCATAACCTGTAAGTAACGACACTAAAACAACAAGAATCAACACAATGATATATCCAACTTATTCTCTAAGGTGGTGTTTGGGAAGAAGGGACTAAACTTTATAGTCCCTCTCACAAAAGTATAAGTCCCTCCTATAGGGATTAAAATTTTTTGTGACTTTGAGTCCCTCCTTCCCAAACACCACCTAAATCTACAACTAGATGCACAAACAACGATGCCTCAAGAACATAGTTATTATCCAAGAGCTTTAAATAGGAATAAATAATGGCAACATGAAATGGCGAACATGGAACTGATCTTCTTGTTTATTGATTGTTTCAGAAAAAGCGCGGTAAGGTTTTAGAACATTTTTACAGGTTTATGATTCGCCCCACGCCACTAGTTTGCAGAAGTAACAATTGTTTTTCCTGTTGCATCTTAAGACAACTGCCAAGAACACTAGATAAGTGACATTGTGCCAGTTTGAGAGCATCAACAAACACATCAAAGTCCCCAAAGATGGACAAAACAAGACAAAGTGTACCTTAAATTTACTATATAAATAAATCAAAGCATGAGTACCCTGTAATATTGCACTGTGTGATTTTGATCAGCTTCAGTAAATGTGTAATTGCAGATGATGGTAAGATGTTAAAAAAAACAAAGCACTTCTCATGTGATATTCACATCAATCTGCCGCCAAAGTAGCACCACATGCTATCATGATGCTAAGAGCACACAAAGTTCTTATCATAGAAACATGAAATGCATCACTCAACTTTCATCACCAAAAACTATTCATGAGCCAGTAATTCACAGTAATTGCTTTTAGTAGTTAACAGTAAGTAAGGTGCATGTACTGTTACACATGTAAGACCATTCTTTTTTTTGTTACATGTTTGTCATTGCTCCTACAATTTATGCTACTAGCACACATCATATTTATGTTACTTCACAGTCAGTTTTTTTTTTACCAACAATGGCTTGAAGAGTGTAAAAACATACAAAATAAATAATTGTTTATATAGCTCATTTACTAACGTACTGGAAGATATCAAAGTACCATCGGTATTTTTTTTGTCTATACTACATGGCATCAACTGAATTCCTGAGAATAATTTGTTGCTGTGAGCACAAAAAGTTAAAAGCTTAGAGATTTTTTTTTTTAATTTTTTGAACCTTTTCTATTTTAAATTTTAAAAATAAACTCATGCAAAACTTATTTTCAAAATCTGAACCATATGGCCTTGCCAGCCCGCCTGGCGTGGCAAAACAACACTGCCACGCCGCCTGTAGCGGGCGTGACAGTTTTGTCCTGTCACTCCAGCGAGAGCGGCGTGGCCAAATAACGTTGTCACGCCAGCAGGAGCGGCGTGACAATATTGTTTTGCCACGCCAGTTTGGCCAACGTGGCCAAAAGGTTCATATCTTGAAAATAAGTTTTGGATGGGTTTATTTTTAAAATTAAAAATTAAAAAGGTTTAAAAATTTTAAAAAATCAAGCTTAGATGAATCTAAGAGAAAGTATTGAGCTATATGTAGTCTCTCAAAGCCATAACACAATTCTCAACTAAGGTGTTATGTCATTGGTCCTTACACCAGCTCATCTACTTTGAATTTGCCTTCTTCGCTTGGACTAACGTATTAACTCACTAGATGTTCATTATGTTGGCAACGCGTATTATTGTGTTGCAGATAGCATGTTGTGCAACATTTATGCAGTAATTCCACAGCCTCCTTTGATTCTAATGCAATTTTAATATATGACTGGCAGCTGTCATCCATCCGTTTGCTGAACATTTAGCCTATTTCCTGCTATTTTCAATCTCCATATTGCCGCCAATTTTTATGGGCTGTGGTTCTGTCCTGGCTGGTGTCTTGTACATTACTTACATTGATTTCATGAATAACATGGGCCACTGCAATTTTGAGCTGATGCCAAAGTGGATGTTCCAAACTTTTCCTCCTCTCAAGTATCTCATATATACTCCATCGTAAGTATAAAATTTTAACATCAAGTTCACAATCTGACCAACATATTAGCAGTCCACTAGGTAATGGACTTGGGATTTGTTGCATTCTTAGTCAAAGCTGACAAGTGGATTATGGATAGAAGTATATAAAAAAACTACTTATTTTTGTTCCATTTCACAGGTTTCACTCTCTCCATCATACCCAGTTCCGTACAAACTACTCATTGTTCATGCCATTCTATGACTACATTTACAACACCATGGATAGTTCAAGTGATGAGTTGTATGAGAGATCATTGAAAGGAACAGAGGAAACACCAGATATTGTTCACCTGACACATATGACTTCCTTGAAATCAACGTATCATCTAAGGATTGGGATTACTTCCATATCATCTAAACCATGCAATGACTCAGTGTGGTATATGTGGATGCTATGGCCTGTTGCGTGGTTATCAATGGTACTGGCATGGATTTATGGATCTTCAGCATTTGTTGTCGAGAGACTAAAACTGAAGAAGTTCAGCATGCAAGTATGGGCACTACCAAGATACAACTTCCAAGTAATGGATTCATCCGCAGTAAGAGCAAGTTTAATAGTATAGCCCACTATTAGCTTCAATTCATCTATAGCCAATCTAATAGCCAATTCATACAATAGTTGCTTACTATACTATTAATATATGGTCCCACCTGTCATACACACATTGCGTCTTGGAGTCCATGCTGCAGCTGGCTACAGATCTGTAGCCCGCTCTTCTCTCTCATCTTTTATTTCATTAAAATATATTTACAGCCGGCTAATAGTCTGCTATTGTACCTGCTCTAAGATTGCTATGCCTTAACAGTTAACAGTTTGAAAACTGCTAACAAGTTCTTTCCATGCAGTATGGCTTGTCTTGGGAAAGTAAGTCCATCAACAACTTGATCGAGAAGGCAATATTAGATGCTAATGAAAAAGGGGTCAAAGTGCTCAGTCTAGGACTTCTAAATCAGGCATGATGATAATTATTGTATTGCATAATTTTCTTTTATACTATTACAACCTTTCTGTATAAATATGGATTCAAGTACATTAGCAAAATGCATGCAAGAATAACATTTTGTCTACTTCTAACAACTTCGTAGAATTAGTCAGTTTTTTACCAGAATCATTGTGAAATGTCAGGTCATGCATAAACACATACAAATTTCTTTGAAAAAAATTGTACAAAAAACATTGATTTGTTTCATCCAAACTTCAGAAGTGTACCATTTAATCAGATGGCCATGATTTTAGACCTCATTTCATCGTTGCAGGCAGAACAACTCAATGGAAGCGGTGAATTGTTTGCCAAAAAATATCCAAGATTAAGGGTACGACTTATTGATGGAAGCGGCTTAGCAACTGCCGTGGTGCTCAATAGCATACCTTTTGGTACAAAGCAAGTTTTTCTCTGTGGAAGTAATTCTAAGGTGACCCGTGCAACAGCCATAGCTTTATGTCAGAGAGGTGTCCAGGTAAATCTAGCAGCCTCCCACTTTGTTATGTTCGATACATTTTTATAATCATTTAGTAGATTATTTTTTATATTAAATTATCTTAATGTATTAAAACTTGGGTTATAAATCTTGCTATAATCCAGACTATTCCACATATTTTTGTGCAGGTAATCCTGAATCAAGAGAAAGAATATGGAATGCTCAAGTCTCGAGTTCCAGAGAGTAGAGCTATCTATCTGAAATTCTCTAATGATGAAACACCACAGGTAAAATAAGGAGGGAGTTTTCCTCAAGAAGCATAAATTGGTGAATAAATAGTACTGTGGTACCATAGACACTACTGGAGCTTGGTAGGCTAGTAAAAATCTCAACTATAAACCTTGTTAAAAGAATTCAAACAAGTTATTCATGCATCATGCTATCACACGAGTTCCCATATGTGTGACACTATATTATATAACCACTATTGGGATTGCATCAAATGACGAGTAAATTAGTGGGTGATGTATATTAGTAATACTTTAATGCTCCTTCAAAATTTGTCCACAACTTTAAGACCATTCCCAACCCAATGACTAGGATGATGTCCATAGCATTAAATAAGCTAGCACCTATGATGAAAAATGATGTGTCAAGTGAATAAATGAGGAAAGAGAAGAAAATTATGTCTTGCATGAAACATAGTTTCTACACAACACCCAAGACATCATGTGAGATAAGTAGCATTAAATTTAAGTATGGAATATTGGTGTTTGTATTGAAATAGTAGTGTCTAGTACTAGTTCTTGATGAGGCGGAGTTTATGGAAACTATGTCTAGTGTCTTGGGTTAGGATTGACCTAAGGGGTCCTTAGAGTACTACTTCTCCCACCCAACTACCAGTCATTTAATTTTCACCCAATTTTACCCCCAAACCACCCTCCCACTCCCCTAACATCCGTCATCATTAATGAGGGGGTACATGCATCTCTTCCTTTCATCCTTAATATCTCAAAAAAAAACAGCTAGGATACCTTGTGGACAGAGGTTCATAAAAGAGATAACCAAGAAAAAAAAACTCATGCAAGCTTATTATATTCATGATTATACTCCCATTGCAACAGATTTGGATAGGAGATAGCATAGACGATGCACAAGGGAGGGCACCAAAGGGAACTATATTTATTCCCACGTCACAGTTCCCCCTTAAGAAGGCACGCAAGGACTGCACTTACTTGAGTAACCCAGCAATGAAGATCCCAGAGACAATGCAGAATGTCCACACCTGTGAGGTATTTTGAGCTAAACAAAATGGGCCCATATGTTATATACCAACTATTTCTCCATGCCTAAATTTACCAACATTGACATGAGTATACTACTGGCTGTATGAACAGAATTGGCTGCCAAGAAGGGTGATGAGTGCATGGCGCATTGCTGGAATATTGCATGCTTTAGAAGGTTGGGAAATGCATGAATGTGGAGATGATATGATGACCATTGAGAAGACTTGGTCGGCAGCTATTAAGCATGGATTCAAACCTCTGACAAAACCTTGCTCTCTGAATTCTGGAACGGACCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014731