BGIOSGA015293

From RiceWiki
Revision as of 16:01, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA015293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015293, complete gene.

LocusTag

OS04G0349700

Ensembl Transcript ID

BGIOSGA015293-TA

Ensembl Protein ID

BGIOSGA015293-PA

Length

4815

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14166532..14171346

Sequence Coding Region

14170946..14171346,14166532..14169310

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14166532..14171346 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14166532..14171346 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCTCCCGTAGTACCAGCATGCTCCTGCTGTCCCCGCTCGTTGTTCACCTGCTCCTCCTGCTTGCGATCATCCAACACTCCTGCTCCCTCGGCACCTACAGCAGCAGCAGCATCAACCAAACTGCAAAGGTGCCGTACTGCCGGCCCGACCAGGCCTCGGCGCTGCTCCGGCTGAGGAGGCGCTCCTTCTCCCCCACCAACGATTCCGCGTGCACCCTCGCGTCGTGGCGCCCCGGCACCGACTGCTGCGCCTGGGAGGGCGTCGCCTGCAGCACCAGCACCGGCACCGGCACCGGCGGCGGCGGCGGCCGTGTCACCACCCTCGACCTCGGCGGATGCTGGCTGGAGATCAGCGCCGCCGGCCTCCACCCCGCTCTCTTCGAACTCACCTCCCTCAGGTACCTGGACCTCTCGGAGAACAGCCTGAACGCTAACGACTCCGAGCTCCCGGCCACTGGGTTCGAGCGGCTCACCGAGCTCACCCACCTCAACCTCTCCTACTCCGACTTCACAGGAAACATACCACGCGGGATACGGCGGCTCAGCAGACTGGCGTCTCTCGACCTGTCAAACTGGATCTATCTCGTTGAAGCAGACAACGATTACTTCCTCCCGCTCGGCGCAGGGCGGTGGCCCGTCGTCGAGCCAGACATCGCATCGCTGCTCGCCAACCTCAGCAACCTGAGAGCGCTCGATCTGGGCAATGTTGACCTGTCCGGCAATGGCGCGGCATGGTGCGATGGATTGACCAACTCCACTCCTCGGCTCGAGGTTCTCAGGCTCAGAAACACCCACCTCGATGCTCCGATCTGCGGATCGCTGTCCGCCATTCGCTCCTTGGTCGAGATCAACCTGGAGTTCAACAAACTGCACGGCGGAATTCCGGATTCCTTGGCTGATCTGCCTTCCCTCGGTGTTCTTAGGCTCGCCTACAATCTCCTCCAAGGGCCATTCCCGATGAGGATATTTGGAAACAAGAAGTTGAGGGTCGTTGATATCAGCTATAATTTCAGACTGTCCGGTGTGCTGCCCGATTTCTCATCGGGTAGTGCTCTGACTGAGCTGCTCTGTAGCAACACTAACCTGTCTGGTCCCATCCCGAGTTCTGTAAGCAATCTCAAATCCTTGAAGAGTTTGGGTGTTGCAGCAGCTGGTGACGGTCACCGAGAAGAGCTTCCCTCTTCAATTGGTGAGCTCAGGTCCTTAACATCGTTACAGCTTTCTGGGTCTGGCATAGTAGGAGAAATGCCTTCTTGGGTTGCGAATTTGACTTCTTTGGAAACTCTGCAATTCTCCAACTGTGGCTTATCTGGTCAACTGCCTTCATTCATGGGTAATCTCAAGAACCTAAGTAACTTAAAATTGTATGCATGCAATTTTTCTGGTCAGGTACCTCCACATCTATTTAATCTAACTAATTTGGAAGTCATAAACCTTCATTCCAATGGTTTCATTGGCACAATCGAACTCAGCTCGTTCTTCAAATTGCCCAATCTATCAATACTGAATCTTTCAAACAACAAACTTTCTGTACAAGTCGGGGAACATAATTCTTCATGGGAACCCATCAATAATTTTGACACTCTATGTCTAGCATCTTGTAATATATCCAAGCTCCCTGATACCTTGAGGCACATGCAATCGGTTCAAGTTCTTGACTTTTCAAGCAACCACATCCATGGCACTATACCTCAGTGGGCATGGGATAATTGGATCAACTCGCTCATCCTGATGAACTTGTCACACAACCAATTCAGTGGTAGTATAGGATATGGCTCTGTCATTTCAGATGGTATGTTTGTTATTGATATCAGTTATAACCTATTTGAAGGTCACATACCTGTACCAGGACCACAGACCCAACTGTTTGATTGCTCGAACAATCGATTTTCATCCATGCCATCCAATTTTGGTTCTAATTTAAGCAGTATTTCCCTTCTCATGGCTTCCAGCAACAAGCTGTCCGGAGAAATTCCACCATCGATTTGTGAAGCAACAAGCCTTTTGCTCCTTGATCTCTCCAATAATGATTTTCTTGGCTCCATCCCTTCTTGTTTAATGGAGGATATGAGTGACCACCTGAATGTATTAAACTTGAAAGGAAATCAACTTGGTGGAAGATTGCCAAATAGCCTAAAGCAAGATTGTGCATTTGGGGCATTAGATTTTAGTGACAATCGGATTGAAGGGCAGTTACCCAGATCTCTAGTTGCTTGCAAAGACTTGGAGGCTTTTGATATCAGAAATAATCGTATTGATGATACATTTCCATGTTGGATGAGTATGCTTCCTAAACTTCAAGTCCTTGTTCTGAAATCCAACAAGTTTGTTGGGAATGTGGGGCCTTCTGTTTCTGGAGATAAAAATAGCTGTGAGTTTATAAAACTTCGAATTTTTGACTTGGCTTCAAACAATTTCTCTGGACTATTACAAAATGAATGGTTTAGAACAATGAAATCCATGATGACTAAAACTGTCAATGAGACGCTGGTCATGGAAAATCAATATGATCTACTTGGCCAAACATACCAAATTACCACTGCCATCACATACAAAGGGTCTGATATTACTTTTTCGAAGATATTGAGGACAATTGTAGTCATTGATGTTTCGGATAATGCGTTCTATGGTGCCATTCCCCAGTCTATTGGGGACCTAGTTCTACTTAGTGGGGTAAACATGTCACATAATGCCCTCACTGGACTGATCCCATCTCAGCTTGGCATGCTACATCAACTTGAGTCGCTCGACCTTTCTTCAAATGATCTTTCAGGAGAGATTCCACAAGAGTTGGCATCACTGGACTTCCTTTCAACATTGAATATATCCTACAATAAGTTGGAGGGAAGAATACCCGAGTCTCCCCACTTCTTGACATTCTCTAATCTCTCATTTCTAGGAAACATGGGTCTCTGTGGACTTCAGCTGTCCAAAGCATGCAACAACATATCATCAGATACGGTTCTACATCAATCAGAGAAGGTGTCAATAGACATTGTGTTGTTCCTTTTTGCCGGACTCGGATTTGGTGTTGGATTCGCAATTGCAATTCTCTTAACATGGGGAACCTCAAGGAGCTTGTCCTTAGCTTTACAGACTGTCGCAATGAGCTACCAGGGCAATGCTCTGTCTTCCACTCGTCCAGCTACTTCACCTAACCAATTACAGTATCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MISRSTSMLLLSPLVVHLLLLLAIIQHSCSLGTYSSSSINQTAKVPYCRPDQASALLRLRRRSFSPTNDSACTLASWRPGTDCCAWEGVACSTSTGTGTGGGGGRVTTLDLGGCWLEISAAGLHPALFELTSLRYLDLSENSLNANDSELPATGFERLTELTHLNLSYSDFTGNIPRGIRRLSRLASLDLSNWIYLVEADNDYFLPLGAGRWPVVEPDIASLLANLSNLRALDLGNVDLSGNGAAWCDGLTNSTPRLEVLRLRNTHLDAPICGSLSAIRSLVEINLEFNKLHGGIPDSLADLPSLGVLRLAYNLLQGPFPMRIFGNKKLRVVDISYNFRLSGVLPDFSSGSALTELLCSNTNLSGPIPSSVSNLKSLKSLGVAAAGDGHREELPSSIGELRSLTSLQLSGSGIVGEMPSWVANLTSLETLQFSNCGLSGQLPSFMGNLKNLSNLKLYACNFSGQVPPHLFNLTNLEVINLHSNGFIGTIELSSFFKLPNLSILNLSNNKLSVQVGEHNSSWEPINNFDTLCLASCNISKLPDTLRHMQSVQVLDFSSNHIHGTIPQWAWDNWINSLILMNLSHNQFSGSIGYGSVISDGMFVIDISYNLFEGHIPVPGPQTQLFDCSNNRFSSMPSNFGSNLSSISLLMASSNKLSGEIPPSICEATSLLLLDLSNNDFLGSIPSCLMEDMSDHLNVLNLKGNQLGGRLPNSLKQDCAFGALDFSDNRIEGQLPRSLVACKDLEAFDIRNNRIDDTFPCWMSMLPKLQVLVLKSNKFVGNVGPSVSGDKNSCEFIKLRIFDLASNNFSGLLQNEWFRTMKSMMTKTVNETLVMENQYDLLGQTYQITTAITYKGSDITFSKILRTIVVIDVSDNAFYGAIPQSIGDLVLLSGVNMSHNALTGLIPSQLGMLHQLESLDLSSNDLSGEIPQELASLDFLSTLNISYNKLEGRIPESPHFLTFSNLSFLGNMGLCGLQLSKACNNISSDTVLHQSEKVSIDIVLFLFAGLGFGVGFAIAILLTWGTSRSLSLALQTVAMSYQGNALSSTRPATSPNQLQYL</aaseq>

Gene Sequence

<dnaseqindica>1..401#2037..4815#ATGATCTCCCGTAGTACCAGCATGCTCCTGCTGTCCCCGCTCGTTGTTCACCTGCTCCTCCTGCTTGCGATCATCCAACACTCCTGCTCCCTCGGCACCTACAGCAGCAGCAGCATCAACCAAACTGCAAAGGTGCCGTACTGCCGGCCCGACCAGGCCTCGGCGCTGCTCCGGCTGAGGAGGCGCTCCTTCTCCCCCACCAACGATTCCGCGTGCACCCTCGCGTCGTGGCGCCCCGGCACCGACTGCTGCGCCTGGGAGGGCGTCGCCTGCAGCACCAGCACCGGCACCGGCACCGGCGGCGGCGGCGGCCGTGTCACCACCCTCGACCTCGGCGGATGCTGGCTGGAGATCAGCGCCGCCGGCCTCCACCCCGCTCTCTTCGAACTCACCTCCCTCAGGTATGAAAAGAATTTGACAATATATATGTATATTTTTTTTAGAATTTGTATTTATATACATGTTTGCGGGAAAATTACAAAAATATATTCTTAATTCCTTCGGGTAAGAAAGTAATATGAGAATATATATATTAATATTAAAAATATATATACATGTGTTTGGTTTGGGATATGATGTGATGGGTTGGATCCATCCTTGTTTTTTTTAATGGAATGATTCTGTTTTTTTAAGGAATATAATGGGTTGAAATGATCCTATATTTTATTTGGATGGAGCAATCAAAATGGGTTGTCTGGATACAATTACCTCGCACCTTAGTTGATGAGGTTACCTCTTATAGTCTACAAACTACAAGATAATATTTCTACATGATAATCATACTATTTAAAAATAAAATACCATTCATATACTATATTTGAAAATAAAATACAAATAACACGCATAATATGCTCTAGCAGCTTCATTTCTACAGCCCTAGGCCTGAGCACTCGTTCACTGCAGCCAAGATCAGTGGAGGCTTTGGGATTTCAACATATTGGACAAGCCACCAAATGATAAACAGTACCGGCAGTTACAATCATGCATAATTAGTGCACAGTCAAAATTTCAACCCATACATATAGAGTCTAAGCCAAACATAATAAGAAGTTCAAGTCATACACATAATAGTAAATTAAGTCTTACACGTAATAGCAAATTTAAGTATTGCACCTACTAGAGAGATCACTGCCTTAAAAATATTGGCAGTATAAGTCATACATTAACATAGGCCAACCGGCAACACATAATACCAAAAGAACTATCCAACTCATCCAACAAAGCTACATTGATCCAAGAAACTTATCATTATCATTAATGAACATAGCAACCCAATGTATCTTGTTTTCAAATGGAAGTCTATCAAAAGCTCTAGCAATGTGAGGGTTGGCAACCAAATGAGCATAGTAAACAGATATGTGGATCTCCTCAAACCCAGGAAGGCAGGCTTTTCAAGGTGTCAAATAAACCATCTGGCAGTTTTCACACATTCTCGAGAAAAACAGATATGCACAGATCTAACGAAATCCTCATGCAATGTTTAGGGTATTTTTACCGTAGAGAATGGGAACCCCGATCTGCGGTCGGTGGTTACGAATGGAGGAGATGAGGGTGAGCAGCTACCGGCAAGAGAGGAGGCACCACCACCCCTGCTCGTGCCCTGCTTGTGTGCCGGCTCAACCCTTCTACCGCCGCCGCCTCATCCCCGCGCGCCAGCTCGCCCGCCCACGCTCGCGCCGCCGCCACCCCGTGTCTCCTGTTGCTAACCCTAGAACAGACTGAGAGGAGATAAGAACAAAGGGGAAAAAAAGAGGTGAGACGCTTTTGTCTTACTGCGCGTGAGGCATGAGTCACTTGTGCGGAGGTGGGATCGTTTCGTCCGCCACTTTTTTTCCGGACGAGCCTGTCCCAAATATTGAAGGGATATTCTCTTTTGGAGCCATCCTATCCCTCCTAGTCTCTCAACTAAACAGATGCAAAAATGGGATGATCCCATCCCATCCCGGGATATCCTCCCAACCAAACACATGCTATATTTATATACATGTTGGTGGAAAAATTACGAAAATATACTCTTAAATTCTTTTTCCCCTCAGGTACCTGGACCTCTCGGAGAACAGCCTGAACGCTAACGACTCCGAGCTCCCGGCCACTGGGTTCGAGCGGCTCACCGAGCTCACCCACCTCAACCTCTCCTACTCCGACTTCACAGGAAACATACCACGCGGGATACGGCGGCTCAGCAGACTGGCGTCTCTCGACCTGTCAAACTGGATCTATCTCGTTGAAGCAGACAACGATTACTTCCTCCCGCTCGGCGCAGGGCGGTGGCCCGTCGTCGAGCCAGACATCGCATCGCTGCTCGCCAACCTCAGCAACCTGAGAGCGCTCGATCTGGGCAATGTTGACCTGTCCGGCAATGGCGCGGCATGGTGCGATGGATTGACCAACTCCACTCCTCGGCTCGAGGTTCTCAGGCTCAGAAACACCCACCTCGATGCTCCGATCTGCGGATCGCTGTCCGCCATTCGCTCCTTGGTCGAGATCAACCTGGAGTTCAACAAACTGCACGGCGGAATTCCGGATTCCTTGGCTGATCTGCCTTCCCTCGGTGTTCTTAGGCTCGCCTACAATCTCCTCCAAGGGCCATTCCCGATGAGGATATTTGGAAACAAGAAGTTGAGGGTCGTTGATATCAGCTATAATTTCAGACTGTCCGGTGTGCTGCCCGATTTCTCATCGGGTAGTGCTCTGACTGAGCTGCTCTGTAGCAACACTAACCTGTCTGGTCCCATCCCGAGTTCTGTAAGCAATCTCAAATCCTTGAAGAGTTTGGGTGTTGCAGCAGCTGGTGACGGTCACCGAGAAGAGCTTCCCTCTTCAATTGGTGAGCTCAGGTCCTTAACATCGTTACAGCTTTCTGGGTCTGGCATAGTAGGAGAAATGCCTTCTTGGGTTGCGAATTTGACTTCTTTGGAAACTCTGCAATTCTCCAACTGTGGCTTATCTGGTCAACTGCCTTCATTCATGGGTAATCTCAAGAACCTAAGTAACTTAAAATTGTATGCATGCAATTTTTCTGGTCAGGTACCTCCACATCTATTTAATCTAACTAATTTGGAAGTCATAAACCTTCATTCCAATGGTTTCATTGGCACAATCGAACTCAGCTCGTTCTTCAAATTGCCCAATCTATCAATACTGAATCTTTCAAACAACAAACTTTCTGTACAAGTCGGGGAACATAATTCTTCATGGGAACCCATCAATAATTTTGACACTCTATGTCTAGCATCTTGTAATATATCCAAGCTCCCTGATACCTTGAGGCACATGCAATCGGTTCAAGTTCTTGACTTTTCAAGCAACCACATCCATGGCACTATACCTCAGTGGGCATGGGATAATTGGATCAACTCGCTCATCCTGATGAACTTGTCACACAACCAATTCAGTGGTAGTATAGGATATGGCTCTGTCATTTCAGATGGTATGTTTGTTATTGATATCAGTTATAACCTATTTGAAGGTCACATACCTGTACCAGGACCACAGACCCAACTGTTTGATTGCTCGAACAATCGATTTTCATCCATGCCATCCAATTTTGGTTCTAATTTAAGCAGTATTTCCCTTCTCATGGCTTCCAGCAACAAGCTGTCCGGAGAAATTCCACCATCGATTTGTGAAGCAACAAGCCTTTTGCTCCTTGATCTCTCCAATAATGATTTTCTTGGCTCCATCCCTTCTTGTTTAATGGAGGATATGAGTGACCACCTGAATGTATTAAACTTGAAAGGAAATCAACTTGGTGGAAGATTGCCAAATAGCCTAAAGCAAGATTGTGCATTTGGGGCATTAGATTTTAGTGACAATCGGATTGAAGGGCAGTTACCCAGATCTCTAGTTGCTTGCAAAGACTTGGAGGCTTTTGATATCAGAAATAATCGTATTGATGATACATTTCCATGTTGGATGAGTATGCTTCCTAAACTTCAAGTCCTTGTTCTGAAATCCAACAAGTTTGTTGGGAATGTGGGGCCTTCTGTTTCTGGAGATAAAAATAGCTGTGAGTTTATAAAACTTCGAATTTTTGACTTGGCTTCAAACAATTTCTCTGGACTATTACAAAATGAATGGTTTAGAACAATGAAATCCATGATGACTAAAACTGTCAATGAGACGCTGGTCATGGAAAATCAATATGATCTACTTGGCCAAACATACCAAATTACCACTGCCATCACATACAAAGGGTCTGATATTACTTTTTCGAAGATATTGAGGACAATTGTAGTCATTGATGTTTCGGATAATGCGTTCTATGGTGCCATTCCCCAGTCTATTGGGGACCTAGTTCTACTTAGTGGGGTAAACATGTCACATAATGCCCTCACTGGACTGATCCCATCTCAGCTTGGCATGCTACATCAACTTGAGTCGCTCGACCTTTCTTCAAATGATCTTTCAGGAGAGATTCCACAAGAGTTGGCATCACTGGACTTCCTTTCAACATTGAATATATCCTACAATAAGTTGGAGGGAAGAATACCCGAGTCTCCCCACTTCTTGACATTCTCTAATCTCTCATTTCTAGGAAACATGGGTCTCTGTGGACTTCAGCTGTCCAAAGCATGCAACAACATATCATCAGATACGGTTCTACATCAATCAGAGAAGGTGTCAATAGACATTGTGTTGTTCCTTTTTGCCGGACTCGGATTTGGTGTTGGATTCGCAATTGCAATTCTCTTAACATGGGGAACCTCAAGGAGCTTGTCCTTAGCTTTACAGACTGTCGCAATGAGCTACCAGGGCAATGCTCTGTCTTCCACTCGTCCAGCTACTTCACCTAACCAATTACAGTATCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015293