Os08g0101600
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0101600 |
|---|---|
| Description |
Single-strand DNA endonuclease-1 |
| Version |
NM_001067297.1 GI:115474330 GeneID:4344420 |
| Length |
4095 bp |
| Definition |
Oryza sativa Japonica Group Os08g0101600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:86814..90908 |
| Sequence Coding Region |
86827..87508,87773..87903,87976..88076,88196..88278,88501..88600 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:86814..90908 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:86814..90908 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggggtgaagaacctgtgggacatcctggagtcgtgcaagaagaagctcccgctccaccacctccagaacaagaaggtgtgcgtggacctgtcgtgctggctggtccagatgtacagcgccaaccgctcgccggccttcgccaaggacaaggtctacctcaagaacctcttccaccgcatccgcgccctcctcgccctcaactgcaccctcctcttcgtcaccgatggggctataccttcacttaagttggccacttaccgccgtcgcctcggatccatttctcatgctgctaaagaatcagatcagcccaattcacacccatccatttcactgcgtcgcaacaagggttccgagttctcctgcatgattaaagaggccaagcgtctcggcatggccctcggcatcccttgcttggacggattggaggaggctgaagcacagtgtgcatccctagatctagagtcactctgtgatggctgtttcacttcagactcggatgcttttctttttggcgctaggactgtttatagagatgttttcataggggagggtggctatgtcatttgctatgaaatggaagacatagagaaaactcttggctttggcaggaactcgctgatatcacttgcagtgctccttggtagtgattattctaatggagttaatgggtttggcccagaaacagcatgccggcttgttaagtctgtaggcgacaatttaattcttgatcagattttgtctaatggagttaaagctactagaaaatgtaaagggaaaaatagtggaaacaaggtggacgacatgtgccccaaagcaagttcctgcgaggttggcatgactcaagactctgatggtcaatttcgtgacgtcataaatgcatatctggagccaaaatgtcactcacctgattcggaagctgtgcagagggtatgcggacagcacccatttcttcggccacagcttcaaaaaatatgcgaggaatattttgattggagtccagagaaaactgatcaatatatacttccgaagattgctgagagagaacttcggaggttttcagaccttcgctctgcgtcttcagcactaggaataaaacctttgttgagtgagataccagtaccatgccctgtactggcgattgtgaagcagaggaaagttcatgggaatgaatgttatgaggtttcatggagaaatatagaagggctccaagtttcagtagtccctggggatcttgttaaaagtgcgtgcccggagaaaataacagaatttttggagaagaagggtgaagagaagaagcagaagaggagagcaaggccaaagaaatcagggcaggctgcagtgaaagatgttgatgaacagctccaagagttgctgcttggtattgaagctgatagtggtggcatattgggtgctacagccagtgtgtgtcagactctgacagcagcctacactgtggctgtggaagatgtagttgatctgtcgtctccttctcctcctcttcggaagctctccaagtcccaaaagaagatgatggccgaggatgtcaatgtggctggtatgaacatgaacaagatggagtcagaaagtagttttagcacgcaatcaagtactagtgatgttgacaaccagctgattgatctgtcttcacccctggctggtggtgataatggtatgaaaggtggaagaagagccctggcagacataagcaatgttggttcacacagcactgagacagacggaggaggaggaggtggtggtggtgtggcatcggtcggccatggaaccaccatcgacctatcttctccgtcgccggccataggcgacagatcaagggttcatcacgatgatgatgatgtaatacacgagaggaaagcaagggacctgagaatgttcctggacagcatacggaacgagctgtattga</cdnaseq> |
| Protein Sequence |
<aaseq>MGVKNLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQMYSANRS PAFAKDKVYLKNLFHRIRALLALNCTLLFVTDGAIPSLKLATYRRRLGSISHAAKESD QPNSHPSISLRRNKGSEFSCMIKEAKRLGMALGIPCLDGLEEAEAQCASLDLESLCDG CFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDIEKTLGFGRNSLISLAVLLGSDY SNGVNGFGPETACRLVKSVGDNLILDQILSNGVKATRKCKGKNSGNKVDDMCPKASSC EVGMTQDSDGQFRDVINAYLEPKCHSPDSEAVQRVCGQHPFLRPQLQKICEEYFDWSP EKTDQYILPKIAERELRRFSDLRSASSALGIKPLLSEIPVPCPVLAIVKQRKVHGNEC YEVSWRNIEGLQVSVVPGDLVKSACPEKITEFLEKKGEEKKQKRRARPKKSGQAAVKD VDEQLQELLLGIEADSGGILGATASVCQTLTAAYTVAVEDVVDLSSPSPPLRKLSKSQ KKMMAEDVNVAGMNMNKMESESSFSTQSSTSDVDNQLIDLSSPLAGGDNGMKGGRRAL ADISNVGSHSTETDGGGGGGGGVASVGHGTTIDLSSPSPAIGDRSRVHHDDDDVIHER KARDLRMFLDSIRNELY</aaseq> |
| Gene Sequence |
<dnaseqindica>3401..4082#3006..3136#2833..2933#2631..2713#2309..2408#2049..2196#1839..1898#1217..1290#1008..1080#863..914#665..798#514..575#274..431#109..176#gagaaatgcaaatcggaatttgaagtttggagtcaccgccgccgttgaggtccgtcgtctcgtccgagtccggtccggcggaagtaggggcggaagtgcgggcgggagatgggggtgaagaacctgtgggacatcctggagtcgtgcaagaagaagctcccgctccaccacctccagtgagtccccgatcgatcgatcgatccgccattaaaattaaaattaatttccggggagggtttgctaatggattgggaaatgaaatggtggaggaaggaacaagaaggtgtgcgtggacctgtcgtgctggctggtccagatgtacagcgccaaccgctcgccggccttcgccaaggacaaggtctacctcaagaacctcttccaccgcatccgcgccctcctcgccctcaactgcaccctcctcttcgtcaccggtaatcccattctccttttctacttttcatttctagtatttctcacactcagacgccagattgaattttttttgtttgtcagatggggctataccttcacttaagttggccacttaccgccgtcgcctcggatccatttctcatgtctctgccactcactctctacttctgcactgcaaacaaccttttgcttaattacttgtactacattgcttgcttcccctgttgtttaggctgctaaagaatcagatcagcccaattcacacccatccatttcactgcgtcgcaacaagggttccgagttctcctgcatgattaaagaggccaagcgtctcggcatggccctcggcatcccttgcttggacgggtacatacatgctttccattctccaaataactaaacatggtctcaccgttattttcttcaacagattggaggaggctgaagcacagtgtgcatccctagatctagagtcactctgtgtaagtatgatgatacttgtcctaatcacatcaattgtacctgcccccttctttatttatttatttatttatttatttcttttcttctttcaggatggctgtttcacttcagactcggatgcttttctttttggcgctaggactgtttatagagatgttttcataggtgaagctgattgcttattggcttgcatcacaactcatcaacaattttgttgctgcctgctgccttgttctattatcaactagtctttgcttatatatttatctggaaatcctactcatgttctcaatcaaattaggggagggtggctatgtcatttgctatgaaatggaagacatagagaaaactcttggctttggcaggaactcgctggtaagttgcaatgaatttgttctgcccgagtttcaacttatgggatctcttctgaacaaatgttttgactgcttgtgacatatcacaaagatgtaaaataaacttacttaaatatgccccttatgctcctagaaagatcacttagacttttgtcagttaatggcttaacacggtcaaagcaactaatagataaagacctttaagagtagactgcactgcaggcacaacagcttagtaagtgaatgcaatgtgctgatttaaaacaagaacttgcaagttgtatgcatagagcaacaccattttctcaactctgatatcacaagaaaatgtctcagcgcactcttaaaaatcctttgggtaattatcatgtattagtcagagattacgggatgttgcatgtaattgctgatgacttgtatgacaatatgatgcaataacaatattacatctcccaccaatgacttttttttgggcttctgattctcaggattttttttttgtgtgataatgcgtaaattcttattgtcctgacttgacaacctttccagatatcacttgcagtgctccttggtagtgattattctaatggagttaatgggtttggcccagtaagtacaaaaaaaactgtcattttcattgtcttagtataacatgcatctgttcttatatgtttctatatgaaatctgacactcgacgacaagatgggaatcatggagcttatcattatatttgtaatggtgctcttttaatgttccaggaaacagcatgccggcttgttaagtctgtaggcgacaatttaattcttgatcagattttgtctaatggagttaaagctactagaaaatgtaaagggaaaaatagtggaaacaaggtggacgacatgtgccccaaagcaagttcctgcggtaagcagactctgtggtgcttttctctaaaatttaagtaattagctatgccataaacatgttgtggacagggaatacgcaacatcatttatgtaatatccttgttttacagaggttggcatgactcaagactctgatggtcaatttcgtgacgtcataaatgcatatctggagccaaaatgtcactcacctgattcggaagctgtgcagaggtaaaagagttagtggaaaactacttcgctgtatagtttatttgtctcggattttgaggttcagccccaattgctgatatgatactttgctttcagtatgtgttcacctttttatatttttcttgtcatttttgggtgattctgtggaaaattgatcagggtgttaaagataggggttgcttaaattgcttttctgaaggttcgtttgttctatctccatagggtatgcggacagcacccatttcttcggccacagcttcaaaaaatatgcgaggaatattttgattggagtccagagaaaactggtactctctgaagtcctcgactgttatgatgattagcattattagtatgtgcaagaggaaggcagtaacatgttttaataggtatggatcctgacttgttttcttctgtatgtctgcagatcaatatatacttccgaagattgctgagagagaacttcggaggttttcagaccttcgctctgcgtcttcagcactaggaataaaacctttgttgagtgaggtaaaaactttggtctgtctgaagcaaacgttttacatgtacctttctcaagtctaagtatctaatttacagataccagtaccatgccctgtactggcgattgtgaagcagaggaaagttcatgggaatgaatgttatgaggtttcatggagaaatatagaagggctccaagtttcagtagtccctggggatcttgttaaaaggtagtaacactgtaacagtcctctcttatccggcaatagcaacagtgattgtgtgctgctggcacatttttctgaatattgcgaggtgcgattatgcacagaaagcatgcataagacacatattaggagttcaagtagaagtctattgaatccagaagttagttgcttgatgcaacaaaccattgccgctcatgcacttttcattttactcttaaggaggaggattcttgcccttcctaaatgcttttgcctgtgcaattgcagtgcgtgcccggagaaaataacagaatttttggagaagaagggtgaagagaagaagcagaagaggagagcaaggccaaagaaatcagggcaggctgcagtgaaagatgttgatgaacagctccaagagttgctgcttggtattgaagctgatagtggtggcatattgggtgctacagccagtgtgtgtcagactctgacagcagcctacactgtggctgtggaagatgtagttgatctgtcgtctccttctcctcctcttcggaagctctccaagtcccaaaagaagatgatggccgaggatgtcaatgtggctggtatgaacatgaacaagatggagtcagaaagtagttttagcacgcaatcaagtactagtgatgttgacaaccagctgattgatctgtcttcacccctggctggtggtgataatggtatgaaaggtggaagaagagccctggcagacataagcaatgttggttcacacagcactgagacagacggaggaggaggaggtggtggtggtgtggcatcggtcggccatggaaccaccatcgacctatcttctccgtcgccggccataggcgacagatcaagggttcatcacgatgatgatgatgtaatacacgagaggaaagcaagggacctgagaatgttcctggacagcatacggaacgagctgtattgagtgattatttatg</dnaseqindica> |
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