Os08g0101800

From RiceWiki
Revision as of 20:43, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0101800

Description

Protein of unknown function DUF821, CAP10-like family protein

Version

NM_001067299.1 GI:115474334 GeneID:4344422

Length

5149 bp

Definition

Oryza sativa Japonica Group Os08g0101800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:101232..106380

Sequence Coding Region

101601..101936,104607..106010

Expression

GEO Profiles:Os08g0101800

Genome Context

<gbrowseImage1> name=NC_008401:101232..106380 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:101232..106380 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggggaagtagcaataatcacaagtcgaagtcggaggaggaaggcgtggccttggtgcaggtagcggaagagggcgagacgacgacgaagcagcagcagcagccggactcaaataaggcggcggcggaggaggaggaggaggaggccggctacggctacagcaattggtggtcaacgtgggtgtcgtcggcggtgaagaagcgagtgcgggcgccgggtcgcgtgggtatcgtcgtcgtcgtcggcggattcgtcctgctggccttgctcgccgccgtcgccgccaccaccaccaccacctggccgcaactcgtcgatttcaccggcgccgtttcgtcgttcctgcagtttggcaatggtgacggtgcacggcgccacaggcctcaccgcactagtctcgtttccattccaattccattcacctgcggcagcggcaatgacacgggcacatgcccccgctatgcggcgtcagctccggcgccggcgcctgcatcgatgtcgccgccgccaccacagacgtcgacggtggattactgtccgtcctacttccggcacatagagctggacctggcggcgtggttggcgtcaggcatcagtcgggaggcggtggagcgggggcggcggcaggcgcacttccggctgctggtggtggggggccgcgcctacgtggagacgtaccggcgtgcgttccagacgcgcgacgtgttcacgcagtggggcatcctccagctgctccgccgctacccggggcgcgtccccgacctggacctcatgttcaactgcgacgacatgcccgaggtgcgcgccgccgcctaccccgaccgggccgccgcgccgcccctcttccgctactgcaaggacccctccaccctggacgtgctcttcccggactggtccttctggggatggccggaggtgaacatccggccatgggcgccgctgctcgcggagatggcggaggagaaggcgcggctgccgtggagccgaagggagccctacgcctactggaagggcaacccggacgtgtcgccgctgcggcaggagctcctccgctgcaaccactccctcccccccgacgacacggtcaggttgtaccgccaggactggggcttcgccaaccgcaacgccttccgcgactccaacctggcccgccagtgtcgccaccgctacaagctgtacgtgcagggccgctcctggtccgtcagccgcaagtacatcctcgcctgcgactcgcccgtcctcgccgtcgccacgccctaccaggacttcttctcccgaggcctcgccgccggcaagcactactggcccatcgacccctcccgctccaagctgtgccgcgacatccgcttcgccgtgcgatggggcaacgcccacccggcgcaggcgcagcgcatgggcctcgccggcagcgccttcgccacggacgacatggccatggactacgtctacgactacatgctgcacgtgctcacgcgctacgcctcgctgctccgctacaagcccaccgtgccggaccgcgccgtggagctgtgcccggagtccatggcgtgcccccgccgaggccgcgaccgcgacttcatgatgcagtccagggagcagtacgtggccgactaccagccctgcaccattccaccgccgccgctcaccgccgatgacgccaccaacatggcccacagggatgccgaggtgctcagcaacatcgacaagatgatcataacggaggacaagcacaattaa</cdnaseq>

Protein Sequence

<aaseq>MRGSSNNHKSKSEEEGVALVQVAEEGETTTKQQQQPDSNKAAAE EEEEEAGYGYSNWWSTWVSSAVKKRVRAPGRVGIVVVVGGFVLLALLAAVAATTTTTW PQLVDFTGAVSSFLQFGNGDGARRHRPHRTSLVSIPIPFTCGSGNDTGTCPRYAASAP APAPASMSPPPPQTSTVDYCPSYFRHIELDLAAWLASGISREAVERGRRQAHFRLLVV GGRAYVETYRRAFQTRDVFTQWGILQLLRRYPGRVPDLDLMFNCDDMPEVRAAAYPDR AAAPPLFRYCKDPSTLDVLFPDWSFWGWPEVNIRPWAPLLAEMAEEKARLPWSRREPY AYWKGNPDVSPLRQELLRCNHSLPPDDTVRLYRQDWGFANRNAFRDSNLARQCRHRYK LYVQGRSWSVSRKYILACDSPVLAVATPYQDFFSRGLAAGKHYWPIDPSRSKLCRDIR FAVRWGNAHPAQAQRMGLAGSAFATDDMAMDYVYDYMLHVLTRYASLLRYKPTVPDRA VELCPESMACPRRGRDRDFMMQSREQYVADYQPCTIPPPPLTADDATNMAHRDAEVLS NIDKMIITEDKHN</aaseq>

Gene Sequence

<dnaseqindica>370..705#3376..4779#agctagatgtagcttaattagctagctagccgctcaagtcatatatatatatatatatgctagctagagggaagacgaaggagttagctagctaggagagggcgagagatgagcagcagctagaagcagctgatctatctatctatctatctatctatctatctatctatctatgtagagctcactcatgtatgcatatatacttggatctcctctcctctccggtcatctcatatatacgtatctatatcgatatagatcgcctgccggtttatagttagatatgcatgtatcgatcgggatactattactaatatatagttagttaaaccaaattaagatcgatcaaatacaatatatcgatcgatcatgaggggaagtagcaataatcacaagtcgaagtcggaggaggaaggcgtggccttggtgcaggtagcggaagagggcgagacgacgacgaagcagcagcagcagccggactcaaataaggcggcggcggaggaggaggaggaggaggccggctacggctacagcaattggtggtcaacgtgggtgtcgtcggcggtgaagaagcgagtgcgggcgccgggtcgcgtgggtatcgtcgtcgtcgtcggcggattcgtcctgctggccttgctcgccgccgtcgccgccaccaccaccaccacctggccgcaactcgtcgatttcaccggcgccgttgtaagtcaagtccctcgctcaattatcatttctttcttcaatatatcaattcgatcgtgcatgcatataccttatataattcattcattcaactccgatgcgatcgatccacttgtttttttttaccgctagcagctagcgacgatgcacgtacgacgcacgaccacaggcccaggagttatatttatttattagttgatgaattgaaattagtatatacgaaactttaatttgtcgctcaaatcagcctcaattaaaatttcaacatatattggggttaacaaatttattttggtggagttttttcttctgagagaaagaactttccaaattatattatataaggtatgtaataattaattgtgatcaagattatatttagtttttttactctaccaaaatttagtaacgatgaaatttggtaaagttgtgaacacatgccgaccggccggccataatttccaagtttgacgtcaaacaccgtacccaatacaatctagctagttttatttggtttagcacctggattactagctaattactagtggtaactaacttacagcatgctcatgctgtcacgcattgaatgttgactagcttaattcttctttccaccaacaaatgaccacatcatatatagctagctacagatccacggaaactagctagcgctgcttgttagtgcgcatttccattttccaccctctatattaatttacacatgtatacacctgaatcaacacgcttcgatcaatggatatgcatcttaaattaattaatttcacccaaattgtattttgtatgcatatatatatgcatgcatatatagttgggcttataactgtacttgtagacgactgacagatcaattaatataatatagatagctagatggatatatagatccaatagaaagcaagcaaagccatgcaagcagtatggtccgtgttcacgacgaaagtgcttgatcacgagatacacggcactgtagctagtttgttaagctaagctggagtagttgattaactcctggggatattaagcttagtagtactcgctccatgtccaacaccgttgattttttaaacaatgtttgacatttatcttattcaattttttttacaaatataaaaataccatgcttaaagaataaatcaagtcacaataaaattaatgataattacataatttttttaaataaattgaatggttaaacgctgataaaagattaattgtattatatattaaaatacggagggagtatatattaatcctatcaaaagactactgcatcagatatatttataacgagtgaaaaaacactactagtacatataattatgttactattactagtggttctatggttctgcggcgcgcgccttggtttttcacaaggaaagtaaaccagatgatcatgcatcacaacgcactataaatcgccaaaaacagtagtagtacataaatgcatgcatgtagtttacttaattttgaacacacatatttattgattaaaaatagtactccaattgtaggacgtcctatttttaagaaaaattaaactcggtaacttttaactaataatctaactatgtactacatatactaattattatgcacgttatatcactagattcatattttaaagtactttcttgtgatgctagttgcatgtttgttgaaaacatagattgaaataaattaatggtcaaagtatgttattaaagagcgtgtaaaaaaatataggcattataatttaagacggagctaggagtatatgtttccattagagatacaaaattaaaaggagacacttcattacttatgacaaattaacccctcattagttagaatttatagtgaaattaagattaagggtagtataataattacgtaatgcgcgtatatggttggttgtttttagcctaagtatatatatacgtgtatgaatgatataagttcttcgaggctagctgttgagttgagtcaactgcgtacgttgtaagtacatagaatatataaggatgcatgacgttactactcaccgctgtacgatctcaggttggaataattcatttactaacaaaaccgcgcgttgaaattaagcgccacaacatgtggaaaaacttgttcgacttttaatttggctcgcagactttgagcgatcgaagaactagatagctaagcgagctagtgagtacgtgtccaatccatcacaatcgatgatggttgaataaacatacattaggccattatcatcttgacctaaagtgattttaatttaacaatatttgaagctgtgcgcttccgatggagatcgacaaacaacggcttccatacggcaacttaataaatttgatggagatgtatagctgtacctgttgctcgtcgattcgtcgtcttggtcgtgcatgcatcaatggaattacaaccactcttccttacaactagctagtcttggtcgcccgtcatgcttaatttgcatcaatggaattacaactagactttactactattaattaattcctcactaattaagtaataaatagtagtactggttattttacctaatcatctatacttagctagtatctgaccgattatatattagttaattaataaatttaatcattttctgtactgtacatgcatgatggatggatggagcagtcgtcgttcctgcagtttggcaatggtgacggtgcacggcgccacaggcctcaccgcactagtctcgtttccattccaattccattcacctgcggcagcggcaatgacacgggcacatgcccccgctatgcggcgtcagctccggcgccggcgcctgcatcgatgtcgccgccgccaccacagacgtcgacggtggattactgtccgtcctacttccggcacatagagctggacctggcggcgtggttggcgtcaggcatcagtcgggaggcggtggagcgggggcggcggcaggcgcacttccggctgctggtggtggggggccgcgcctacgtggagacgtaccggcgtgcgttccagacgcgcgacgtgttcacgcagtggggcatcctccagctgctccgccgctacccggggcgcgtccccgacctggacctcatgttcaactgcgacgacatgcccgaggtgcgcgccgccgcctaccccgaccgggccgccgcgccgcccctcttccgctactgcaaggacccctccaccctggacgtgctcttcccggactggtccttctggggatggccggaggtgaacatccggccatgggcgccgctgctcgcggagatggcggaggagaaggcgcggctgccgtggagccgaagggagccctacgcctactggaagggcaacccggacgtgtcgccgctgcggcaggagctcctccgctgcaaccactccctcccccccgacgacacggtcaggttgtaccgccaggactggggcttcgccaaccgcaacgccttccgcgactccaacctggcccgccagtgtcgccaccgctacaagctgtacgtgcagggccgctcctggtccgtcagccgcaagtacatcctcgcctgcgactcgcccgtcctcgccgtcgccacgccctaccaggacttcttctcccgaggcctcgccgccggcaagcactactggcccatcgacccctcccgctccaagctgtgccgcgacatccgcttcgccgtgcgatggggcaacgcccacccggcgcaggcgcagcgcatgggcctcgccggcagcgccttcgccacggacgacatggccatggactacgtctacgactacatgctgcacgtgctcacgcgctacgcctcgctgctccgctacaagcccaccgtgccggaccgcgccgtggagctgtgcccggagtccatggcgtgcccccgccgaggccgcgaccgcgacttcatgatgcagtccagggagcagtacgtggccgactaccagccctgcaccattccaccgccgccgctcaccgccgatgacgccaccaacatggcccacagggatgccgaggtgctcagcaacatcgacaagatgatcataacggaggacaagcacaattaaccaataataacatatttcttaattatgtgcttgctgctgtaattgtttccttcatttcataaataaatatgatatattaccacgtgctgttactgtactagtgttgatttagcatgacaaattgaatatccattctcagttattgtatcatgtaggcgcgcacacttaattaaacagaggagaacaaattaaagcggagtacaatagctagctagtttgccaataaagcagagtacgagatctggctagctcctttgcacattcgcaactatattttttatttttcttacagcttgtacaaattaaatttaaacttgtatatttgtgaagtgatatatttcatattaatctatattactaattttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0101800, RefSeq:Os08g0101800