Os08g0155100

From RiceWiki
Revision as of 20:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0155100

Description

Major sperm protein domain containing protein

Version

NM_001067554.1 GI:115474844 GeneID:4344689

Length

3839 bp

Definition

Oryza sativa Japonica Group Os08g0155100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3170598..3174436

Sequence Coding Region

3170863..3170911,3171663..3171733,3171828..3171909,3172024..3172139,3172239..3172400
,3172505..3172549,3173444..3173521,3173979..3174089

Expression

GEO Profiles:Os08g0155100

Genome Context

<gbrowseImage1> name=NC_008401:3170598..3174436 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3170598..3174436 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgcgagtttcctcgagatccagccttcggagctctcattcccctttgaactactgaagcagagctcatgctccatgcaactcaccaataagaccgaccattatgttgcatttaaggtcaaaacaaccaacccaaagcaatactgtgtgcgccctaatattggcgtcgtattgccggggtctacatgtgatgttacagtgacgatgcaagcacagagggaggcacctccggatatgcagtgcaaggataagttccttgttcaaagtgttgcagctgagaatggtgcaacaactcaagatattagtgcagaaatgttcaataaggtggcaggaaaggttgttgaggaattcaagctacgtgtagtctatgtgccaacgactacatcctccgcaatgcctgaagactctgaacaaggaagttctgctcggccatttgcacaagaaaatggtatccataattcaacaatgccacaacctgtttttagatcatctgctgaaccaacaaaggagaggcccacagagccatcgtccatgatctccaaactaaatgaggagaatagggttgctattcagcaaaaccagaagttacgacatgagctggagctcctacggaaagaaagcagcaaaagcagtggcggtttctccctcaccttcttggccatcgttggtcttctcggcatcatcgtgggctacatcctcaagaagacatag</cdnaseq>

Protein Sequence

<aaseq>MSASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTT NPKQYCVRPNIGVVLPGSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDI SAEMFNKVAGKVVEEFKLRVVYVPTTTSSAMPEDSEQGSSARPFAQENGIHNSTMPQP VFRSSAEPTKERPTEPSSMISKLNEENRVAIQQNQKLRHELELLRKESSKSSGGFSLT FLAIVGLLGIIVGYILKKT</aaseq>

Gene Sequence

<dnaseqindica>266..314#1066..1136#1231..1312#1427..1542#1642..1803#1908..1952#2847..2924#3382..3492#cacgagctcgcgagcggagattttcccccacgatttttgctgttcatccgtgtgggggaggagagattccgcgtcgattggtggtcggatcggagcgaggagaagcccccgtgttcttggctttttttcccccgatcgaatccggtggaaagcgagcaataaaaaccacttcttttctttttcgtttctggttttctttttcttgttgggtttctcttcctcctgctcgagtttgatctcttgattcgtgaggagtgtggcgaagatgagcgcgagtttcctcgagatccagccttcggagctctcattcccctgtaagtttttggcccagatctcgcctccttcccctccccctgctcgaattgatcgatgtgagtcgttgatggatcttggtcaaagctttggatcttgggggtggaagagaggctgtttgctctctgtttgatccgtgtcagcttgagattcgtcgagtgctgtggtcgattcggccattggatcgtggaagagagaaagagagagagagagagagagagtgtgtgtgtgtgtgtgtgtgattcttgtggtggttgctcttgctgctactgcatgtgtgtctgccttgtttgttttgctgggatttgtgtgagctaggtctcgtgtggttggttgatgaatcgatacggggactaaatttggtgatggcctgcttcgcatttgcgtagaatcatcgtttggtagctgtctgtacttccaggagttttgggatcttgtcagctagtatgtgccttttgaccatgctgatctgctcctgatttgtcgggaagctcgaatgcaatgtccatgcaattcttcatggttattgggatttgattcgatggcagttataagtcttagattgatatagcatgcttagtatgttgatttttttttcatttttttacttaagtttgttgcttcttttttcattttgtcctaaaatgatagagtatgtctttgtagcgaatgtccggtgggttctattgtgttttttttttttttttgcttcagatattctcttgaaactaatttactgtttcgtatatgcagttgaactactgaagcagagctcatgctccatgcaactcaccaataagaccgaccattatgttgcatttaaggtaatctacttgagatgtcacctctcacacgtttctagttgtcaccattcatttctgaatgatttaaatctgttacctcatccatggctggcaggtcaaaacaaccaacccaaagcaatactgtgtgcgccctaatattggcgtcgtattgccggggtctacatgtgatgttacaggtagctgccactccattacatagtgaaactataggataataccagtacaagtctgtttaagatagatagctcagatatctatttagaagtctgcttaacatttggttttattagtgacgatgcaagcacagagggaggcacctccggatatgcagtgcaaggataagttccttgttcaaagtgttgcagctgagaatggtgcaacaactcaagatattagtgcagaaatggtaactactttgcagctcttcattttgtgttgtttcaatcaatttgctatatgcatctgttacaacatctcatcccttatgtttttattatgataacagttcaataaggtggcaggaaaggttgttgaggaattcaagctacgtgtagtctatgtgccaacgactacatcctccgcaatgcctgaagactctgaacaaggaagttctgctcggccatttgcacaagaaaatggtatccataattcaacaatgccacaacctgtaagtcgatcatgtttcctcatttctttattttgtgctcttgtttgtaatcagacttcggaggatctattttttaattatttgtaccgatgtgcaacatttaggtttttagatcatctgctgaaccaacaaaggagaggcccacagaggtagtctttttatcttacttttgtagttagatatttaattgaagaatcagtattattatagaaaagtattgcaactttctagatgaactaagtgtcaaataataatgttggaattatgtgatgtgcccttgttcttttcgactttacttattgtgctcaagtaactaataatgcacagcttatgataacaaagttaagtaaaactggagataattgcagagcataagcccaggcatcctggatctgagtatatgctgtagttgaattgcaagtgatcatgaatcctgactgccgcgcagcatgacattttagtgtttagtatgctttcatgagaccaaaattatagcttttgtttgctttcccagcatgcccctctttaaaattgaattgatgagcacaattacaacatatatgtggagatgcgacatgtacttataagtaattcatggatggcatgtcaccacatatatgtttattatctcactgaattgatttatgcaaaatatctgattacttgctaatatctaatctgaaagctagaatcaacttagctttaaattcagtactacacaagtcaatattttcttttggaaaaccggggcgccttggttgtttatgattcatatgaacttgtctatttgctgcaagcttttccttgctttagccatgaatgacagagtgcatccaatgagtgatgagcttggcacacaggaaaatataggtcatgatagtaatcaggcattttacgtaccgtatgagataattcagtgataatagaaaagccaaaatacaggaacaggagctacatttagttgttagcatgtctttatattccaaaatgcttttaagatttcttttgataaatcacttgttgatgatttatattcttatcagccatcgtccatgatctccaaactaaatgaggagaatagggttgctattcagcaaaaccagaagttacgacatgagctggtaagtacttcaaccattatgaaacagcactagtcgtaccatcattcaaaggaaataaataattgcgatcacaagaactgatggttgacattgctaaaaggcatatcaagaagttgctgctttcttcgtacaactggacttctactttttttttttatggactgtgaatttcaaatttgtgacccattggccattgtttttttgttctgcttaattcaattaaaccaatcatatcaactgtcatgtgatgactagaatctggtgactaagttctcactgacaaatccagatttgtcgatttggagacaaaacaaacatgcgcaatacaaatccggctgctaaattctgcacttgctcaatgctgcattttatctatagcttgcacacgcctgtgaatttaatggattctacgaactgaacattgtgttgatgaaatctctatttatctttcaatcaggagctcctacggaaagaaagcagcaaaagcagtggcggtttctccctcaccttcttggccatcgttggtcttctcggcatcatcgtgggctacatcctcaagaagacatagaagaggtagaggttcccaacaaaagttatactcccaggaaaggatacccctcatattggtatgccgcgcatcgtgtttttttccctcctaaaaggagcacctgtcctaacttgtaacaacaatactcctcctagatgccatggtttgtgtacattatggtggttttacgcttcgctgcggttttttttttttttacattgactaggcttgatttttaagagttttaactggtgcaactgtttgacattctccataatcttttattctttctttctgatcaatttatcatcatactgttaaactttaaatttctcttccagtcacattggcaggcagtgcttgatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0155100, RefSeq:Os08g0155100