Os08g0162500

From RiceWiki
Revision as of 20:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0162500

Description

Conserved hypothetical protein

Version

NM_001067594.1 GI:115474924 GeneID:4344732

Length

2532 bp

Definition

Oryza sativa Japonica Group Os08g0162500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3689713..3692244

Sequence Coding Region

3689838..3689936,3690117..3690185,3690351..3690380,3691113..3691145,3691231..3691301
,3691532..3691613,3691817..3691906,3691994..3692032

Expression

GEO Profiles:Os08g0162500

Genome Context

<gbrowseImage1> name=NC_008401:3689713..3692244 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3689713..3692244 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgctccggcggcggcggcggggaggtacggcaacctcgaaaggtccttcaagctcgccgcccgctccgtcctcaccgcctgctcccgcgaggatgtgaagagggctttcccgtcgtttacggatgcggagagggaacgcttgtaccagatgttcatttacgtgatcaagtctctgcacagcaacatagaggaggaatttgacataccctgccaagaactacaagttgctgctgcccttgaaaagatagatcagtttgttgaagaacaaaagctggatgtgctgtcttcagacaagactaacattgaagacaccaagcaaatgatatcaaaggctaagaaagatgaagttgaatacctgaaaagtctaatagaagaggttgaagagaaaaacaatgccatgaaggctcgaattgaactcttgaagaaagatgatgatttggctgcaggaaaacaagtccttgagaagctgatgcaatgcaattctgcactctacaatggcctttga</cdnaseq>

Protein Sequence

<aaseq>MEAAPAAAAGRYGNLERSFKLAARSVLTACSREDVKRAFPSFTD AERERLYQMFIYVIKSLHSNIEEEFDIPCQELQVAAALEKIDQFVEEQKLDVLSSDKT NIEDTKQMISKAKKDEVEYLKSLIEEVEEKNNAMKARIELLKKDDDLAAGKQVLEKLM QCNSALYNGL</aaseq>

Gene Sequence

<dnaseqindica>126..224#405..473#639..668#1401..1433#1519..1589#1820..1901#2105..2194#2282..2320#acgaggcagcgtggagacgagagggagaggcagccattttttctttttttttttcgctcgtcggaatttcgaatcgggaaacctaacggcgagcggcgcctccacctcgccggaatccaccaccgatggaggccgctccggcggcggcggcggggaggtacggcaacctcgaaaggtccttcaagctcgccgcccgctccgtcctcaccgcctgctcccgcgaggttcggtccccttctctccccaccttcgaatttctcgggctcagctctcgcggccactgcgctttgctactgagagagaccagcgtgaaatgttggggggcgtgatttagagcgagagagtgcttgggggtgaaatcgattcgtgcgcggtgttgactcgtgttgtggtgggcactgcaggatgtgaagagggctttcccgtcgtttacggatgcggagagggaacgcttgtaccagatgttcatttacgtgagtgccctgatcatctgaccatctcccagttcaagaattgcatttgattgtggatttgtctatccctgtaccacaagttaaaatggggttacagaattgagtttcctgtgtgtggtttactgtggccactctaatttcatacatttcttgctcattttgcaggtgatcaagtctctgcacagcaacatagaggtttagtattgtattaagctggttactacttaatgcacggaataaccttgactgtaacaggcactttattttaggctagattaaattcatgcggttgcttgactcatcaagtttgtttttgttgcacaaagcagaattttatttaggcattcaggatatgtgtatggcactggtcgtgctggatgtggttttatagccttacatgcagacataggcatatcccacaaacttttcttgcctttttcttttcctgttatattctgttatcacctaggagtcttcccatgctaattagttgggggcaaggctgggttggatatgttggcttaccatttagctggttctaggtatatattagttactgatttgttgttgtttctccatctttgttaaatgtctaccctttgccttaaatgtgagaaaactttctcaaagatccatggttctgaaactaatttcatagtcaaaaacaaaatgatgagctgttaactgtgttatgttaacagctgctcgagctcacaaacttttccatgtgcctgaccatgatagatttatgttttgaggtgactttcactgcttaaatacattccttattgttggtatgcatggaccataaaattgaaatttcttatgttatgtttgttgaacctgatgttgttctgtttttttgttctagtatgccgtagagtcatacactgtgctgtattaatgtggtacattttcatactgtaggaggaatttgacataccctgccaagaactacaagtaacgtctcaagcaatactttcatgttttattaacacctgcaagatgttttataatttgtatatgtataccatcatttttaaaggttgctgctgcccttgaaaagatagatcagtttgttgaagaacaaaagctggatgtgctgtcttcagacaagtaggtgttatattttgcctctgtggattcatctttttgaaattttgttgttctcttgtccactttctaagaaatacaatcaaatggacaagcatggctattgctctcttatttgttctcaaactgcagcatataaatacacaagatattctgttctgtctggataaaacatgtatttccttgacttgttcttcattccatgtttgggattatggttgatccggttgcaggactaacattgaagacaccaagcaaatgatatcaaaggctaagaaagatgaagttgaatacctgaaaagtctaatagaagaggtaatataccctggaaatggttctgcagacatatagacactattcccaattaatttttcaagggatactcttcttactatgcgaataacaactgagttctaatagatgatttctcctgcgaagacattttcatttttggtaacttggctaaagagcatcttttgcaagtgataatttccttttctcttcacacgataacataggttgaagagaaaaacaatgccatgaaggctcgaattgaactcttgaagaaagatgatgatttggctgcaggaaaacaagtccttgagaaggttctcttagaatcctatccatctgtatcacacttttctcctactgtcactctcattttggcttgacttctgcaaatctttttgcagctgatgcaatgcaattctgcactctacaatggcctttgagtttcagatttttagccgatccgatgattatttacttgctggagtgaaaagacatctgttggatagctgtgtagttttagataggatgttgatccaggaatcgagatggatgccctgtaatgtgaaacaaatactgcagtccgtatgttggatatggttgccaccttgttacctcccagctgcattctgtttcttttaagtctgtgctttct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0162500, RefSeq:Os08g0162500