Os08g0163400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0163400 |
|---|---|
| Description |
Sigma-70 factor family protein |
| Version |
NM_001067600.2 GI:297608011 GeneID:4344738 |
| Length |
3568 bp |
| Definition |
Oryza sativa Japonica Group Os08g0163400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:3731574..3735141 |
| Sequence Coding Region |
3731739..3732463,3732797..3732995,3733134..3733226,3733348..3733476,3733792..3733845 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:3731574..3735141 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:3731574..3735141 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacggcgacgccagcggtgatcgggctgagcgcggggaacaggctgctgagcgcgtcgttcgggccgaccgacctgatgccggacaaggtcagcctcggcgtcggcggaggcgggggaggaggaggaggtggtggaggtggggacgcgatgtcgttcgcgccgccggcgcccgcgacgccgaagctcaccgcggtcgccgcgcacaggctcaagctctccccgcatggccgcgcgcaggtcatgcgcgcgctcaggcaccactcctccgcggcggccgcgctcgcgcccccgcccccgcccccgcccccgccgacgccgtcgcccgcctcgcgcgccgcccacgcccatgacctcgagtcctccctcgaggccatcgtgctgctgcagaggtccatgctcgagaagcagtgggagctccccttcgacgacgacaaccacgccatggccatcggcttggccgaggatgacgacgacaccagcaaggccaccgtcgtcgtggcgcggtccagtgtctcggcgcggcagaggaggatgagcgggcggcggcgggggaggaccaagaacggcgcggcgcacttcgccgtcagccccgagctgatccagagcaggaacaggatctacctcaggggcaccgtcagcaaggagctcctcacgcacaagcaggtcgtccacctctcccacaagatcaaggatggcatctggctgcagcagcaaagatcaaagctgaaagagaagctgggaaatgagccctcatacaaacagctggcgcattcgctgaagatatcaccgcccgagctacgatcaaggatgcacgagtcgtttcttgcaagggagatgctaacaatgagcaacctccgtttggtcatttccattgcccagaagtatgataaccttggtgttgagttggctgacctcattcagggtggtctgatagggttactccgtgggatcgaaaaatttgatgcatccaggggctttagaatttccacttatgtatactggtggatacgccagggtgtttcaagagcattagctgaaaactcaaaaacattcaggcttccaacttatctgcacgagcggctgattgcgattcgtggtgcaaagtatgagttggaagatcaaggaattgctccaacaatagaaaacatagcagggtcactcaacatatcagaaaagaaagtactcaatgctacagaggctgtgaacaaggttctttcgttggatcaacaagcatttccatccttaaacggcttacctggagagacactgcacagttacatagaggatcaaaatgtcgcaaatgatccatggcatggatttgaggagtggtatctcaaggaagaagtcaacaagcttttaaactcaactctcaacgagcgtgagagggacattatccggttatatcatggcataggaaaacaatgccatacatgggaggatattagcagacaattcgggttgtcgagggagagggtgaggcaagtaggactcatcgcaatggagaagctgaagcatgctgcgaggaggaaaaatttggaggcattgcttgaggattattga</cdnaseq> |
| Protein Sequence |
<aaseq>MTATPAVIGLSAGNRLLSASFGPTDLMPDKVSLGVGGGGGGGGG GGGGDAMSFAPPAPATPKLTAVAAHRLKLSPHGRAQVMRALRHHSSAAAALAPPPPPP PPPTPSPASRAAHAHDLESSLEAIVLLQRSMLEKQWELPFDDDNHAMAIGLAEDDDDT SKATVVVARSSVSARQRRMSGRRRGRTKNGAAHFAVSPELIQSRNRIYLRGTVSKELL THKQVVHLSHKIKDGIWLQQQRSKLKEKLGNEPSYKQLAHSLKISPPELRSRMHESFL AREMLTMSNLRLVISIAQKYDNLGVELADLIQGGLIGLLRGIEKFDASRGFRISTYVY WWIRQGVSRALAENSKTFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISE KKVLNATEAVNKVLSLDQQAFPSLNGLPGETLHSYIEDQNVANDPWHGFEEWYLKEEV NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAA RRKNLEALLEDY</aaseq> |
| Gene Sequence |
<dnaseqindica>166..890#1224..1422#1561..1653#1775..1903#2219..2272#2371..2448#2547..2609#2875..2987#3166..3274#gagagtgggtgtccgtgtggcctactacttgcttcctcggcgcgcgcggcgcgtgtgtgcctcgcatcctccaccaccactagtgcagccaagtgcgtgcgtgtgtgtgtgtgcggacaccgttgctgccgccgccgccgccgccgcgcgcagggtggtgacaagatgacggcgacgccagcggtgatcgggctgagcgcggggaacaggctgctgagcgcgtcgttcgggccgaccgacctgatgccggacaaggtcagcctcggcgtcggcggaggcgggggaggaggaggaggtggtggaggtggggacgcgatgtcgttcgcgccgccggcgcccgcgacgccgaagctcaccgcggtcgccgcgcacaggctcaagctctccccgcatggccgcgcgcaggtcatgcgcgcgctcaggcaccactcctccgcggcggccgcgctcgcgcccccgcccccgcccccgcccccgccgacgccgtcgcccgcctcgcgcgccgcccacgcccatgacctcgagtcctccctcgaggccatcgtgctgctgcagaggtccatgctcgagaagcagtgggagctccccttcgacgacgacaaccacgccatggccatcggcttggccgaggatgacgacgacaccagcaaggccaccgtcgtcgtggcgcggtccagtgtctcggcgcggcagaggaggatgagcgggcggcggcgggggaggaccaagaacggcgcggcgcacttcgccgtcagccccgagctgatccagagcaggaacaggatctacctcaggggcaccgtcagcaaggagctcctcacgcacaagcaggtcgtccacctctcccacaagatcaaggatggcatctggctgcagcagcaaagatcaaagtatgcctccattgccacacactgcaaatatgaaatgatcaatccttcatttgaattatcatttcctctcaaaaacattgaaactgttcaagtatattgtttacatttcatcgtcagcttaagcttcggagtgaagatcgattgatcggtgtatgaaattcaccaaaatacttcaaatgatttaagtgatttgattcgtatgatttttcagtaatggccattcaaattgctattctgcattgcactcagtgaccttgcatttgtatgccatttcttcataattttttttagctttcttgatcctgatggtttgttcctccattgttgaaccaggctgaaagagaagctgggaaatgagccctcatacaaacagctggcgcattcgctgaagatatcaccgcccgagctacgatcaaggatgcacgagtcgtttcttgcaagggagatgctaacaatgagcaacctccgtttggtcatttccattgcccagaagtatgataaccttggtgttgagttggctgacctcattcaggtaatggaatcagttaattcagctgcctttgcaattctaacagagtctgttcagtccaatcatctgttggacacactaggaggattttgtgtgcttgagacatgtagtaacgtgttgcgatccaatcacattttgcagggtggtctgatagggttactccgtgggatcgaaaaatttgatgcatccaggggctttagaatttccacttatgtatactggtggatacgccaggtaagagttctctgctatcctgtgctcaggcaaatggatggaagttcagaattacagtcagagattaactcaatcgatacctgatacattgtccttatttcattgtttcgatcgataccagggtgtttcaagagcattagctgaaaactcaaaaacattcaggcttccaacttatctgcacgagcggctgattgcgattcgtggtgcaaagtatgagttggaagatcaaggaattgctccaacaatagaagtaaggcatactgcactaacaaaataaaaatttggctagttctgtttccatgaactacaaaatatttacaattgcagttttctttgtgtattttaatcattgtttctttttatttttaaaattaaaatttaaaacgcagatctgacagtttgccaacctttatgatggttttcagttctgtgaactgcaaagtacttctagttgctgctattgtatttttaaccatgctacttttgtttttctttgaaaaagattatataatttgaatgtcgcgtctctgatggtttgctataaccttttggtggttattctcagaacatagcagggtcactcaacatatcagaaaagaaagtactcaatgctacagaggtaatatatcttcatcttgctcggtggaacttcttttgttaaattcctttgatatttctggcattgtcacagacatttttactggttgaaaaatacaggctgtgaacaaggttctttcgttggatcaacaagcatttccatccttaaacggcttacctggagagacactgcacagtgtaagcagctatatagctactttgaaacaccattatacattttcaattttgaaatgtgccacgagattaaacctttttcgccctttccttgttctcagtacatagaggatcaaaatgtcgcaaatgatccatggcatggatttgaggagtggtatctcaaggtaaccacagagatatttgttccagaagataattgcactaattgctactagtccataatcctgttctttcttttatttttggaaataatccatccacaagacaaaagatcattatgactccaagcattttgtttttaaaagttgactccacaaacatattatagctctgagttggtactggtatatggatgaccagacctcattaccttatgtccttagagaatcattgaatgtgctttaactataaacattctactaataccaggaagaagtcaacaagcttttaaactcaactctcaacgagcgtgagagggacattatccggttatatcatggcataggaaaacaatgccatacatgggaggatattagcagacagtaagtattatttcttcagctcttatggaccaaggtcctgtacatgttcaactgcctagtcaagtttgctcgccataaaaaaaaatctaaaacttttccattattatcaaactattcataatagtttcttggtatatttattagtttataatatttggccttgaaaaatgatcctcagattcgggttgtcgagggagagggtgaggcaagtaggactcatcgcaatggagaagctgaagcatgctgcgaggaggaaaaatttggaggcattgcttgaggattattgagttgaggggctttttgtttgagtcagatccacaaacacagcggttgtatatactcagaaaacatagggtacatccttcaaaaggcgtactgccactcacatgaaagtaattatacgtgtacattttgtgacattagggagatgcatgatcaaaatctctatgcctgtgttatgaccaaggcaatcaggaaacagagagatgatgtttttccttcaaggtttacaattattctgtaatatatatgtaagtatgatttagcttgatcaatagagcaacacttaaaagttctgagcc</dnaseqindica> |
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