Os09g0423400

From RiceWiki
Revision as of 20:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0423400

Description

Biopterin transport-related protein BT1 family protein

Version

NM_001069746.1 GI:115479234 GeneID:4347097

Length

5836 bp

Definition

Oryza sativa Japonica Group Os09g0423400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15986671..15992506

Sequence Coding Region

15986873..15987224,15988152..15988411,15988515..15988613,15989150..15989323,15991371..15992000

Expression

GEO Profiles:Os09g0423400

Genome Context

<gbrowseImage1> name=NC_008402:15986671..15992506 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15986671..15992506 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggaagaacaacaagaagcggaagaggggatcgccggcggcggcggcggatgggcgagcacggcgctgcagccggtgcggtggctgcggatgctgtgccgggagctgggcgcgacgttcgtcgccggcgtggtgctggtgtacgggctgagccaggggttcgccgggtccttcttccgcgtggcgtcggactactactggaaggacgtgcagcgggtgcagccggccaccgtgcagctcctctccgccgtcttcttcatcccctgggtcctcaagcccctctgggggatcatgaccgacgtcttccccgtccgcggctaccgccgccgcccctacttcctcttcgcaggagtacttggaacggcttcagctgctattgttaccatggttaatggactaccgatgacttccgctatactttcctttgtggggatatcaacagcagttgccatagcagatgttacaatagatgcatgcattgcgaagaatggtattgataagccatcattagtcccagacatgcaaagcctttgtgcattctcatcatctctaggtgcacttattgggtatgctacaagtggaatgtttgtccaccatcttggggcacagggtgcattaggtgtgatggctttacctcctgcaacgttggtttttctaggatttttcatatatgagctgaaaatgtatcagcataatgtgaaagagaaggttttgaataaggttcatatggcagtgaaagggatggctcagacaataaagtacccagtagtgtggaagccatccctgtacatgtttctttccctggcgcttagtatcagcactcatgagggacagttctactggtatactagcaaggaaccacctaatcctggattttctcaggaatttgttggtatggtccatgccatcggcgcagttgcatccatggtgggcgtcctggtgtaccacaagtacctcaaggactaccctttccggagcatcctcttctacgcgcagctgctgtacggcgtctccggcctcctcgacctcaccttcgtgctccggtggaacctcctcctcggcgtgcccgacgccgccttcgtcaccctggaggagtgctgcgcccgcgtcgtcggccgcgtcaggctgatgccgatgatggtgctcagcaccaagctgtgcccgccgggcgccgagggcaccttcttcgcgctgctcatgtgcatcgacagcgccggcatgctggcggccaaggccggcggcgccgccgtgctgcgcgcgctccgggtgaccaggaccgacttcgcccgcctctggctcgccgtcctcgtcaggaacctgctccggctgtccacgctcgccgccatctcgctcgtccccacggccgaccagaccgacgtgctcctgccgcgcgacctcctcgccgtcgccggcgacggctctcctcccgccgccggcgacggcgacgacgaggagaggctgcagctcgcgaaattcgctgatcacgtcgacgacgacgacgacgacgactga</cdnaseq>

Protein Sequence

<aaseq>MPEEQQEAEEGIAGGGGGWASTALQPVRWLRMLCRELGATFVAG VVLVYGLSQGFAGSFFRVASDYYWKDVQRVQPATVQLLSAVFFIPWVLKPLWGIMTDV FPVRGYRRRPYFLFAGVLGTASAAIVTMVNGLPMTSAILSFVGISTAVAIADVTIDAC IAKNGIDKPSLVPDMQSLCAFSSSLGALIGYATSGMFVHHLGAQGALGVMALPPATLV FLGFFIYELKMYQHNVKEKVLNKVHMAVKGMAQTIKYPVVWKPSLYMFLSLALSISTH EGQFYWYTSKEPPNPGFSQEFVGMVHAIGAVASMVGVLVYHKYLKDYPFRSILFYAQL LYGVSGLLDLTFVLRWNLLLGVPDAAFVTLEECCARVVGRVRLMPMMVLSTKLCPPGA EGTFFALLMCIDSAGMLAAKAGGAAVLRALRVTRTDFARLWLAVLVRNLLRLSTLAAI SLVPTADQTDVLLPRDLLAVAGDGSPPAAGDGDDEERLQLAKFADHVDDDDDDD</aaseq>

Gene Sequence

<dnaseqindica>203..554#1482..1741#1845..1943#2480..2653#4701..5330#agcaggtgaggtgagagctccacctcccggagctcgaggcttccccggtgaacacctcctcccggacaaataaactaatccaaatgccgacctcgcttccggtgctcgagctcatcggcgaggcgtccgcacgtgcgccaagaacccctcatgagcaggtgaggtgatccttcaagaaaccagcaaaagaaatccaaggtcaatgccggaagaacaacaagaagcggaagaggggatcgccggcggcggcggcggatgggcgagcacggcgctgcagccggtgcggtggctgcggatgctgtgccgggagctgggcgcgacgttcgtcgccggcgtggtgctggtgtacgggctgagccaggggttcgccgggtccttcttccgcgtggcgtcggactactactggaaggacgtgcagcgggtgcagccggccaccgtgcagctcctctccgccgtcttcttcatcccctgggtcctcaagcccctctgggggatcatgaccgacgtcttccccgtccgcggctaccgccgccgcccctacttcctcttcgcaggtcagccactggaatcctgcatctcaaaatgatgagattgatgatctttagttggcgtgcatagatagtagagattagagaatcttatcagtagatagagtatgcgcacagttaaagaacaaaaaaatttgtgaagattttagcaatatgcttgctggtaagaacatcctgaattcctcctgtgtccataatgtcgtagaaattttagttgtggtggcatatttggtactccctccgtcccataatataagaacctagtctgggaccctaggttcttatattatgggacggagggagtatttggtaggcatagtaagttcttaaatgatatttggggtctgatgtggtggtaattgaaaacatagtgctagttcagctttttcaaaaggttcagggggttgctgggggtagagaattgataacacaacgagtgcttggtgatagtacatacttttagactttgtagagagaggttgagtggagactggagaggtagttccaggcacgagcaggaactgtttatgctaggtatcagcagctcattggatggaattggggatgaagatgtgttggttcaactaccatgtggatttcgtttgggactttggatatttgatgatatatgcattgtttattggaggtctagccagatcttaattagtaggtgcaagatttggtgtaagatgttatcttgccaattcttagaacaattgaagtatcaatgtgatgtatctgtgatattgcactttacaaattgctgggcatgatcattttaacaattccttgctgtagtaagtttttaaagtgagtctgagaaagtagcaaacatggaacatattgatcagaaacttatatgttacattttgtcgatttctacagcagttataaacttgacaaataaatcccatttatttctggtgctgacaggagtacttggaacggcttcagctgctattgttaccatggttaatggactaccgatgacttccgctatactttcctttgtggggatatcaacagcagttgccatagcagatgttacaatagatgcatgcattgcgaagaatggtattgataagccatcattagtcccagacatgcaaagcctttgtgcattctcatcatctctaggtgcacttattgggtatgctacaagtggaatgtttgtccaccatcttggggcacaggtcaattacagcctaaattcttgaagcttattgaattgccaagttccattttttggtatgttgcttcattgataatttaaattttgtatgattctttttgtagggtgcattaggtgtgatggctttacctcctgcaacgttggtttttctaggatttttcatatatgagctgaaaatgtatcagcataatgtgaaagagaaggtatgccgaagtgaaaagcaatattgttctatctacttgtgacagttttatttgtgtgcattgaaattttgttccctttacttgtgacattttttatttgcctgcattgaaattttgttccatttaattatgatatttttttgtttgcctgcattgaaatttaccaagttttgaatatcaatatatatttttggtgtcttcatatggtcgtacagatagaggatggtttatctgatatcgctgcatgccacttggcttagccaagctgagacgagtggcttgtgtattgttcttctgagatgtgtaacatattagcaaagttcacaataaaatgaaactgatgcttcagtgactgagattcatcacaggtcttgttaaagcaactaagacctttacggattgaatcccaagtaaacacagacagtgaactcaataggctgtaaagcataggcagaaaccaagtatatcttaatatatggtataacaatgaaagaaatacacaatatatagtttctcaccaagatgctaatgtgcaggttttgaataaggttcatatggcagtgaaagggatggctcagacaataaagtacccagtagtgtggaagccatccctgtacatgtttctttccctggcgcttagtatcagcactcatgagggacagttctactggtatactagcaaggaaccacctaatcctggattttctcaggtaaatgtttttgttttttacctgcctgcttaatcctatcgctgattagcatatttgttggataaaaggcctaatccaagtccatattggaagtttgaaacaatagcacatggttttggactggaaaaccaagtttacaatgtgcccccaagtactcttctttttgctctcaacacttctacacataatacagaagtacaaaacacagggacatcataggcatacagatgttctttaaaacagcaactaccttcatttcttctcaagttcatatcatgtctttatgatgctacctttttttttctcagggtttgtttatacttgtcaataagataatacaagtgaggtgcaataggatatgttgaattggtcctacacactaatcaccaatcactttcaagcaacagaaaataacacaatcaaggtatatcaggaaggaaacctagacaaaagtgtgccctttccttcaaactgggaatctagtatgcactcacacgggttatgtccccacaatcttgcttggtccacaatgctgtcctcactgtctgtaacagatgccttatataagatagactatgttatcccaaaaatatttcttcaccttatctcagaatctaagcctggcacataacaattagtcctaatctccatgatctaagagcttataatgaatagatagtacacaatctccatgttcaagcgttacatggaaactttacaatggcattgttccttaaagcttaggcagtcaggccccatttggagagctgggttttctccagattcctagacatttatacaaatataaagtcagggcatgatgagtatgttttgtgaatagcgaaagcaaatgcataaagcatccctcacaaaggataaaagaagactgttgatcatgaaaaattcacacttgttatagggtgaatggagattagcatcagtagttcaatcccttctgatatagtaattatcttgcttaatctaaaggaatctgatctaatccctttctatcagacaagttctaagggtatcataagtgtaaattaaacaatgaaaaaagacgcatgtacaaaaaagattcttacaaacagtttacaagtagtagtctgggataagatcaattgtggtcatagtttactgcggcataatatttgttgtcatctcttccctccttttttttttcttttttaatgaacataagctatgtacttcctagttatacagaagcattcttaaaataattgtattgatataattatctaagatcaatagatcttcctttatcttaaaaagacataaacagtttccacatatttcttttttcacttaatctaaccagtttttgttaaacaagtgctaactgctaagggcgtcataagagtaaattaaattaaacaatggaaaaggacgcatgtacaacaagattcttacgaacagtttacaagtagtagtttgggataagatcaattgtggtcatagtttactgctgcctaatatttgttgtcaaaatttcccaattctttttctttttaataatcataagctatgtgcatcctacttatacagaaatgttcttaacgatacgattatctaagatcaataaagctttccttcatctgaaaagatacaaacagcttacaaagatttctttttcggcttaatccaaccgcattttgttaaacaggtgctaagggtgtcaataatggattgagatcctctgacgtaaagtcagtggaacatggtgattgacatgtgggccccaccgctcttgggcccacctgtcagtgaccacatccaggggcgaagccacgtgtagggcaacttgggcttgggccccacacgtggcaaaaatttttaatggagaaacactgaaatttacgtagaatttgcacacaaaatttatagttatatggtttagccctactcttgctaaaatgctgcctccgcccctgaccacgtcagggggtaactttacgtcagaggatccgtttccgtcaataatgttgtcacaagattaaaaatagtactcatcccattgcatatgcaggaatttgttggtatggtccatgccatcggcgcagttgcatccatggtgggcgtcctggtgtaccacaagtacctcaaggactaccctttccggagcatcctcttctacgcgcagctgctgtacggcgtctccggcctcctcgacctcaccttcgtgctccggtggaacctcctcctcggcgtgcccgacgccgccttcgtcaccctggaggagtgctgcgcccgcgtcgtcggccgcgtcaggctgatgccgatgatggtgctcagcaccaagctgtgcccgccgggcgccgagggcaccttcttcgcgctgctcatgtgcatcgacagcgccggcatgctggcggccaaggccggcggcgccgccgtgctgcgcgcgctccgggtgaccaggaccgacttcgcccgcctctggctcgccgtcctcgtcaggaacctgctccggctgtccacgctcgccgccatctcgctcgtccccacggccgaccagaccgacgtgctcctgccgcgcgacctcctcgccgtcgccggcgacggctctcctcccgccgccggcgacggcgacgacgaggagaggctgcagctcgcgaaattcgctgatcacgtcgacgacgacgacgacgacgactgaacatagttgatcatacgacattgttgcagcgcgttcttgcatgcatcctgtcactgtcaggtgaggatgcagctatagtagctctgatcaatcgatcagatagattcgttgattcgttcatggcgagcgcatgcatgtctctgatgagacgttgccaggtgacagaaatggcatctctctctgtacgggcaacccggagtggaaagatgagctgggatgtacggattctgttttctgttcagtttggttagcataggaggattctacagagaaaaaaaaaaaagggagaatttgaaccatgccacacaaattttacaaaatttgtgatatgccaccctgacccacatgttattgactcatgtgggtcttatatgtcattgagatacgggtggtatatctcaaatttataaatatagggtggcatggttccaacaaacccaaaaaaaaaaatgaagtgatactaaactctggatttgttttagaaaagatgctgaactttgggttct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0423400, RefSeq:Os09g0423400