Os08g0398700

From RiceWiki
Revision as of 20:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0398700

Description

Peptidase M1, membrane alanine aminopeptidase family protein

Version

NM_001068281.1 GI:115476299 GeneID:4345501

Length

9755 bp

Definition

Oryza sativa Japonica Group Os08g0398700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19109823..19119577

Sequence Coding Region

19109921..19110128,19110232..19110379,19111989..19112091,19112311..19112497,19112615..19112708
,19112817..19112970,19113126..19113230,19113323..19113439,19114343..19114456
,19115217..19115399,19116195..19116486,19116573..19116694,19116806..19116903
,19117122..19117299,19117377..19117491,19117578..19117645,19117773..19117850
,19118984..19119061,19119144..19119329

Expression

GEO Profiles:Os08g0398700

Genome Context

<gbrowseImage1> name=NC_008401:19109823..19119577 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19109823..19119577 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtgcgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctccggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgccgccgagctcgccgtcgacggatcctccgtccgcttccaggatttggtgccttccgaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccgatcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggcttctacaggagcaagtatgagtacaagggggagtcaagaaatatggcagttacacagttcgaagctgctgatgcaagacgatgttttccatgctgggatgaacctgcatttaaggctaagttcaagctaacactggaagttccatcagagttggtagcactgtccaacatgccagtaattaaggagacagttcatggacctctcaagaccgtctattatgaggaatcgccacttatgtcaacttatctagtggctatagttgttggtttatttgattacatagagggctcaacattagaaggcaccaaagttcgtgtgtatactcaagttggcaagagtaaccaaggaaagtttgcactagatgttgcagtgaagtcactggatttattcaaagattattttgccactccttacccgctaccgaagttggatatggttgctattcctgattttgctgctggagctatggagaactatgggttggtcacttaccgagaaacagctttactttatgatgagctgttatcctcagcatccaataaacaacaggttgcaatcactgttgcacatgaattggctcatcaatggtttggcaatcttgtaaccatggagtggtggactcacttgtggctaaatgagggttttgcttcctgggtgagttatttggctgtggaagcattatttccagaatggaataactggacacaatttcttgatgagacgacctctggtctcagactggatgcacttgcagagtctcatcctattgaggttgacataaaccatgcctctgaaattgatgcaatttttgattccataagctatgataagggcgcttccgtcattcgcatgctgcaaagttaccttggtgcagagcgttttcagaaagctttggcatcatatataaagaagtatgcttactcgaatgccaaaacagaagatctatgggctgttcttgaggaggaatctggggaacctgttaaggatttgatgactacatggactaagcaacaaggataccctgttatttatgcaaaactagatggacatgatttgcaccttgaacaggcacagtttctatcggacggatcctctggtccaggcttgtggattgttcctataacatcatgttgtggctcatatgatgcacagaaaaagtttctcttgaagggcaagactgataaggtccatatagacctcactgcctcccaaaatgccggaggagagaagggtgaaaactgttggatcaaattgaacgttgaccaaactggattttatagagtgaagtatgatgatgaacttgcagctggacttgaaaaggcaatcaaagccaataagctctctttaatggataagattggtattgtggaagattcatactccctttctgtggctcgcaagcaaacactgacatccttgcttcgcctgctgaatgcttatcgcaatgagtctgattacactgtgctttcacatgtaacctctgtatgcttaggcattgataaaatatcagttgatgctactcctgaattgtccagagatatcaaacagcttttgatcaatcttcttctatcagctgccaaaacactaggctgggatcccaaggagggcgagagccatcttgatgtaatgcttagatcattgctcttgattgcccttgtcaaacttggacatgatgagactataaatgagggagttaggcggttccatatcttcataaaagaccgcaaaactaacattcttcccccagacactagaaaggcttcatatcttgctgtgatgcggactgttactacctccagcagagctggttatgatgccctcctgaaaatctacagagaaacagctgaagctcaggagaagtcacgcatcttaggttcattgtcttcatgcctggataaggatattgttcttgaggcactaaacttcatgcttaccgatgaggtacggaatcaagatgcattttatgtccttggtggtatcagcttagaaggacgagaagttgcatgggcctggttgaaggaaaactgggatcatgtcttgaagacctggccatcaagttcactcatatcggacttcgtcaaatctactgtttcacggttcaccacagaggagaaggctgctgaagtttccgagttcttcgccggtaaaaccaaaccatcgttcgagcgtgcactgaagcagagcctcgagagggtccgtatcagcgcgagatggatcgagagcatcaggagcgagcctaaccttgctcagacagtgaacgagctgctgcagcacgacatgtag</cdnaseq>

Protein Sequence

<aaseq>MAASPEQFRGQARLPRCASPLSYDLRLRPDLAACAFSGSAAVAV AVSAPTRFLVLNAAELAVDGSSVRFQDLVPSEVVQFEEDEIVVIGFGQDLPIGEGVLK MDFTGTLNDQMRGFYRSKYEYKGESRNMAVTQFEAADARRCFPCWDEPAFKAKFKLTL EVPSELVALSNMPVIKETVHGPLKTVYYEESPLMSTYLVAIVVGLFDYIEGSTLEGTK VRVYTQVGKSNQGKFALDVAVKSLDLFKDYFATPYPLPKLDMVAIPDFAAGAMENYGL VTYRETALLYDELLSSASNKQQVAITVAHELAHQWFGNLVTMEWWTHLWLNEGFASWV SYLAVEALFPEWNNWTQFLDETTSGLRLDALAESHPIEVDINHASEIDAIFDSISYDK GASVIRMLQSYLGAERFQKALASYIKKYAYSNAKTEDLWAVLEEESGEPVKDLMTTWT KQQGYPVIYAKLDGHDLHLEQAQFLSDGSSGPGLWIVPITSCCGSYDAQKKFLLKGKT DKVHIDLTASQNAGGEKGENCWIKLNVDQTGFYRVKYDDELAAGLEKAIKANKLSLMD KIGIVEDSYSLSVARKQTLTSLLRLLNAYRNESDYTVLSHVTSVCLGIDKISVDATPE LSRDIKQLLINLLLSAAKTLGWDPKEGESHLDVMLRSLLLIALVKLGHDETINEGVRR FHIFIKDRKTNILPPDTRKASYLAVMRTVTTSSRAGYDALLKIYRETAEAQEKSRILG SLSSCLDKDIVLEALNFMLTDEVRNQDAFYVLGGISLEGREVAWAWLKENWDHVLKTW PSSSLISDFVKSTVSRFTTEEKAAEVSEFFAGKTKPSFERALKQSLERVRISARWIES IRSEPNLAQTVNELLQHDM</aaseq>

Gene Sequence

<dnaseqindica>99..306#410..557#2167..2269#2489..2675#2793..2886#2995..3148#3304..3408#3501..3617#4521..4634#5395..5577#6373..6664#6751..6872#6984..7081#7300..7477#7555..7669#7756..7823#7951..8028#9162..9239#9322..9507#cttcttccctccctcccttccccactactctactcccccactcgccgtcgcaactcccgccgccgcaccgccgcaccgccacaccgcccccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtgcgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctccggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgccgccgagctcgccgtcgacggatcctccgtccgcttccaggcacgcgcgcaccgcctcccccgttaaccatccgtgtctgtttgcgttgttgccgtgtgttcgtttcagggtcgctcaatcgttgtatgatggggttttgtaggatttggtgccttccgaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccgatcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggcttctacaggaggtatcgttgccacctctttcagttacagataactggtgattgttgctagtctctcgttcacatgaggtgcgaacaggcattccagcagcaacagcttgcagttctggtttattagatggtagtcgcggacgtgggatttctagatagagaatcgagttttagagaacaatgtcacgatatctatgaaaaatcatttttgatatgccattaaaaatgagtaaatagttttccatagtttggatgatttacatgaatttggagaatttttttggtttggaggctacttttctgaaaatgtataattggttcaaattcttactccaatattagttaaaaaagaagacttaagaatatctattcttcgtgctggagacgaccaattgaaacttgaggaaataagaaaaatattacatactacataggatgtatggaagagtccaagacacctaacactagtattactacaagctattgaaattctaacaaacaattactacaagctattgaaatcctaacaaacagaagacaaaaaaattgaacacctaataaagagaggagaaaaaagaattgaggatgcaggaatcgaaccctcgacatgatatataataagaaagctttaaaccagtacaataagataagctttatgatataacgcattgttttcaaatatcttgggtatccacttgaatacctatgaaccatggggggttcacacctactagatgaggtccgaagctgctattcgttgttatgagtaactaggcttcgagcagtgacttgatggaaactgcaagtgtgtgtttggaagcaatcaatagcattggcacatgaactttaacaacaagggctaggtgtaccggttcaaaaattgttgccatgcttgatgtgctaagacaatggatagtatctatatcttatttggtaatgtcctagaaagtgactaagatctcaggatctttaggatgtgagcttgaatctacaatcttatcttataatgatcgaccatccactctttgttaatcctgaaacactcttcattaaacttattgaaccatttgtgtctgcctaggatcctgatcttgtcttcaaaacacacactatacgctattggtagagtatgctgctctccatactaccataacaccatccataactcgcagcctagcacccactgttcaccaggccctatagagcattagcatatgtatatccatcttaataatgtagttttgattatgatttttttggcatgttgtaatattatagggcttggatagcaaacatagtttttgggatatttatttccatttttatttgaaattgccacaatttgatgtaactagtaccttcctgtgctatataccatttgtaagtcttagtttactcctgtcctgtctttgtgtcaccaagattcatgattggagtgtgatgtataaatactgtatatattatccaggacctccatgtttggattttatcttcatttttgtaacaaagctgtatacattacataatcagtgtagtttggagtgcaccggttgtactttctttatatccttgtgatctgtttttaatgcattgtgggtggtgtttccgtgtttgattgcagcaagtatgagtacaagggggagtcaagaaatatggcagttacacagttcgaagctgctgatgcaagacgatgttttccatgctgggatgaacctgcatttaaggtgtttaacatgctacaatgttgtttccctaggagtgttttgatgtaattcagacaggaaaatattgtaatgaaagaaaaattcagtttgcacttctagtttttacacaggtcttaactaatattttcatggtccttggctccttgctctgtagaatttggaaggttggatcaattatctaaaataacattacctcttgtctggttatttctggtttaggctaagttcaagctaacactggaagttccatcagagttggtagcactgtccaacatgccagtaattaaggagacagttcatggacctctcaagaccgtctattatgaggaatcgccacttatgtcaacttatctagtggctatagttgttggtttatttgattacatagagggctcaacattagaaggtagaatttcagtttctgtctccattgtttgctctctttcattcaaactatatgatatgtcccttctttgcctggtctttacacattttttcattggcttttgttaatttaatgtaggcaccaaagttcgtgtgtatactcaagttggcaagagtaaccaaggaaagtttgcactagatgttgcagtgaagtcactggatttattcaaagagtaagcttccaacatagtcttgcttctaagctttatttctaaagatgaggcagaataccatggatggtgcctatttcactacaataactaataatgttcttttatcagttattttgccactccttacccgctaccgaagttggatatggttgctattcctgattttgctgctggagctatggagaactatgggttggtcacttaccgagaaacagctttactttatgatgagctgttatcctcagcatccaataaacaacaggttatgcctatatttatctttatcaatttcatttgtttcatttactattggagagttagtctcgcacttgaatcctcatgtgtagttttggccaggtaaactgctatttttaaaaaagaaagaaagaaagaaaaattaacatctgttctctttaggttgcaatcactgttgcacatgaattggctcatcaatggtttggcaatcttgtaaccatggagtggtggactcacttgtggctaaatgagggttttgcttcctgggtattcaatctgaaaactattgtttgagaaattagaaatattgtccaattgttgtgtatcttaccggctaattattccatatgtttcaacaggtgagttatttggctgtggaagcattatttccagaatggaataactggacacaatttcttgatgagacgacctctggtctcagactggatgcacttgcagagtctcatcctattgaggtaatcttcttcagtatgctttggcgaagtcactgatggataagaaacataatattttgatgctgcacaaatatgcattacagatatggaagtacatgaaagcagtaagataagtgaattaacaaggatacaaattgtgcatgcatactgactagggatgaaaacagagcggatatggacagataatgctcataccatattcgttttcatatttttttgctggatacggaaacgaatacggatagctcgaatacagaaacaaatacggattatctcgaatacgaataagaatcgaacatgatcggacacaaatacggaaacaaattttttctcggaacacgtaagccaactcaacttctaatagaaacaaatatcaacatatataattagctcattttatataaaatgtagtataatttataaatatttttaaaaatttaaataatattaatagtgtggactagtgttaagagatgaactactcttaaaatctaaaaagataaagaaacggggtatgcctcatggcttctgcggatatctgaattattatccgtatccgatagaaactccgataccatattcgtattcgtatctgtatccgaactatccaagaattatccgatccgaaaggtatccgtattcgtttttctccggagcggacgggaactatctgctctgttttcatccctaatactgactagtcatacaatacaaccaatttttgatatttttataaatctttgcttaatttattcaggtgttgatgcttagaaattagatttttttttgggtagaaactcaaatatgtcaatatgctgccatgcattttttactatttctgtcttcacagagttagcacctttgtcccagttgttaatctggctatttggtatgttcgttcaggttgacataaaccatgcctctgaaattgatgcaatttttgattccataagctatgataagggcgcttccgtcattcgcatgctgcaaagttaccttggtgcagagcgttttcaggttaaatcctgttcttctttctccttgaatgaatttaccaaaatcttgttttctgcaatggtccagcctccagcatctcctgctgctagtatatcagcgctcttgaattgacactcttatccacgcatgttatatttatattcttcataaacaactcagcgctagatggctctacagaagtccagattgcatttaactcagattgattaagaaaattttgttgaccaaaaataataaagggcatcgtaattgtttgctttgactttgtttctggtcattttgcaaatctgtggtgaatctgctgaagaatatcttgagtttggatttttcttttttagtttttgtttattctttccagtaaagaaggtgatatcatagaatgcatgcggtcaacaagtcatatcaacttttaccaaaggctgtagaatatatagttgagatatataaacaatggtgtgagtgattttttcatgaaagatactcataagtttttagaccaaagtatgaagattgatccagctttactatacccaagataagagtctctttacaggaaaaataaataaagaaaagatattcataattttacaattacatcatttcttttgaatactcggtaacaacgtttagaattttagtacccatattagcatattgttgtctttctatgagattgtgtcatgttattgactttgtatttattatcacaatttattagtcttcggcaggtgctgattttgtgaattttttactctttcagaaagctttggcatcatatataaagaagtatgcttactcgaatgccaaaacagaagatctatgggctgttcttgaggaggaatctggggaacctgttaaggatttgatgactacatggactaagcaacaaggataccctgttatttatgcaaaactagatggacatgatttgcaccttgaacaggttttctggcagatttctcattctcatgttataccaacatacatgaagaactgaatatatgtatccatcggccttgccttattccattgccttatgcttcgtccaatctgaaatctaagtctttttggccttattcccaagaactaaggaagtagcaaaatggtgttgttcccttcatttattccattaaaaacacgatccatttattcataatagtagtagctttcaagtagaaagagaatggagggaaaaaagagaaaactgcctcaaaaattctacagtaacttgcacttagagagattgaaaagagtaaaagactaaaatgacttttatttggatttgaggtggtatatgtctaagttttagctgtactagtcacttgttcaggatcgcttctttccagaacctctacttttattcatacatctaatcttatattagtttgtttcttttgtttttaacttctcatagttgtctagaggacctcacctttcctcatacacacttttaggacaacatgcatgtcaccttgatcagaaactcagaaccataataactggagatgagaatatcatagtgtgctttgtgtttcatgttatctttcgttattcatgtatggtctgctgatgtctttattcacaagtgtatggttgtattttttttctcaaatgcatccaataactggcaaaattatagatttcgaagtattggaactagaaaatttcgttcttctggcccatatcagtgctttcatattgcaaaaagaggagcttactgaagtctgttctattacaggcacagtttctatcggacggatcctctggtccaggcttgtggattgttcctataacatcatgttgtggctcatatgatgcacagaaaaagtttctcttgaagggcaagactgataaggtccatatagacctcactgcctcccaaaatgccggaggagagaagggtgaaaactgttggatcaaattgaacgttgaccaaactggattttatagagtgaagtatgatgatgaacttgcagctggacttgaaaaggcaatcaaagccaataagctctctttaatggataagattggtaatgacaagatgaattttcaatactactcgtataatatatccttgtcaagattttgacaacagaaacacaatattttgctgcaggtattgtggaagattcatactccctttctgtggctcgcaagcaaacactgacatccttgcttcgcctgctgaatgcttatcgcaatgagtctgattacactgtgctttcacatgtaacctctgtaagtaaacctttcgccacctccaatgaaatcatataccttgtatctttgattgattctatggtatcaactattgttctcaatattaaatacatgcatcctttttgacaggtatgcttaggcattgataaaatatcagttgatgctactcctgaattgtccagagatatcaaacagcttttgatcaatcttcttctatcagctgccaagtatgctaacaaacttaatgttttaccattttcatcatcatgtttatctggatttcacgaatctggatattatcatttatgtgcatttgtatatttacttctgagttggcgcatgccactggtgaatttgtttctgttaataaacttctgtctactatattcctgctgttttctttctatgatcatattgaaatccttcttgtacttctaaatatcagaacactaggctgggatcccaaggagggcgagagccatcttgatgtaatgcttagatcattgctcttgattgcccttgtcaaacttggacatgatgagactataaatgagggagttaggcggttccatatcttcataaaagaccgcaaaactaacattcttcccccagacactagaaaggttcaggcttttgcttaacatactactgcagtgttacctctatgatatctagcatactgatatgcattggtctgcaggcttcatatcttgctgtgatgcggactgttactacctccagcagagctggttatgatgccctcctgaaaatctacagagaaacagctgaagctcaggagaagtcacgcatcttaggtttgtgcattccaaccgtctagcttaagcgacagcaggaattttctgatgagttgtcctggaaagtaacgtttcttctgttttaggttcattgtcttcatgcctggataaggatattgttcttgaggcactaaacttcatgcttaccgatgaggttaaccctctgaatcatttatattttacttattctgaacaaatgattccagatagtaaatggtagaatgagaaccattatacaccattggtacagaagccaatctaatctctctcttgcttgttaggtacggaatcaagatgcattttatgtccttggtggtatcagcttagaaggacgagaagttgcatgggcctggttgaaggtatgttattatagttgcagggtacctaaagtggattattatagttatctgataaacaacgcacacatttctgatatttttgaaagaaaaaacataagcactgtatgtggtgctcaatatatatatatttttactgttgtgaggggttcaaagttcaattgttctgccaaatgccaatgcatgctaggtgtctatctcaatacaagaacaaataatttgttaaaagttaacgatggaactaaaacagatgaaatagggaagatgaaattatcaaaacttcctttgcaccgaccgtgccaatatccaagttactgcaattgaatgatgttccctccctgttcacactttgcacgattaggtctcttcacccaaaactggcgcaatcaatctattttaccaaatatcattggtcctgctcttttagccaaccagaaaacaaaaaagcaaaaggttttactgagatacacagtacatcataggaaagctgttctgacagatgaactgaagccgtttatgcagttgcaccaaataggagtatgctgctaatgagctttgtgcccttaccaatggctgggaaacttattccattatctaaaaaaatttcgatgatcacctccatgagatttaaatctccaaacccattcacgagtccacaattctgcatagctctctgctattcgagggaaatccaagcttgtagcgtatgaataacaatagaacacatttttccactttatagaagagatgctgcctgcataacacactatttgatactacctccgcccccaaaataattgtaattctaggttgtttagcatatattaaggtttaagaagaaagactatgataccccttattaaatggtatataggtaagagtgggagggtagttgaaggtaaaatagagagaaatttgaataagaaatgattaatgagaccattagtattctgttgtgataactatttttggacaaattcaaatcctataaatacaattattatgggacagaggcagtaataatgagctaaacgaagaagttacattaataagttctgttatttttagcaagtctgattaggagttcagagtaagttgtacttttatgaccatgagcccatctgtgcatgatgcaggaaaactgggatcatgtcttgaagacctggccatcaagttcactcatatcggacttcgtcaaatctactgtttcacgggtacgcgaagtcaccgaccactttttgcttcattgttctccttgctctgctgctaaattcgccgttttctctgcatgatcagttcaccacagaggagaaggctgctgaagtttccgagttcttcgccggtaaaaccaaaccatcgttcgagcgtgcactgaagcagagcctcgagagggtccgtatcagcgcgagatggatcgagagcatcaggagcgagcctaaccttgctcagacagtgaacgagctgctgcagcacgacatgtagccttccttttgggctaaagctatttgtacgctcatggaggatcgtacaacacaaatgttcttcgaaaggttgtgccgggtgtggctgttctaacgatcatattttaaagtttgtttagttctatctctatcttttgcttgggcaatcgaaaagacatgtttggtcctcgcagcgaggtgtgcttggttcagcttttgtcaggactggcaatgaaaatcacaaatcttgtacagaactgtttcatttct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0398700, RefSeq:Os08g0398700