Os08g0406400

From RiceWiki
Revision as of 20:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0406400

Description

Similar to Sulfate transporter (Fragment)

Version

NM_001068304.1 GI:115476345 GeneID:4345528

Length

1884 bp

Definition

Oryza sativa Japonica Group Os08g0406400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19518813..19520696

Sequence Coding Region

19518813..19518836,19518924..19519050,19519140..19519426,19519526..19519716,19519818..19519903
,19519996..19520072,19520304..19520447

Expression

GEO Profiles:Os08g0406400

Genome Context

<gbrowseImage1> name=NC_008401:19518813..19520696 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19518813..19520696 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atttccgccatgatcggtttaacggaagctgtggcaattgggaggacgtttgctgctctgaaggactatcaattagatggaaacaaggagatggtagcacttggaactatgaacatagcagggtcaatgacatcttgttatattgcaacaggttctttctctcgttccgcagtcaatttcatggctggctgccaaacaccagtgtccaatatcattatgtcagcagttgtgctcctgaccttgttggtcatcacaccactcttcaagtacacaccaaatgcgatcctcgggtcgataatcatttctgcggtgatcggccttgtggactacgaagcagtaattctcatttggaaagttgacaaaatggatttcatttcttgcatgggagcattctttggtgtggtcttcgcatctgttgagataggtcttttaatagctgtatcgatttcatttgctaaaattcttcttcaagtaacaaggccaaggactgtacttctgggaaaccttccaggcaccacaatatacaggaacactgatcagtatccagaagcaagacatattcctggggttgtaatagtgagggttgattctgctatctacttctccaactcaaactatgtccgggagagaactcttaggtggttgacggaggaagaagagaaagccaaagcagagggacagtctaaaatcaatttcttgatcatagagatgtccccggtcatagatatcgatacaagtggcatccatgctctagaagatctatacaagaatcttaagaagagagacattcagctcatcctagcaaatcctggatccatcgtcatggaaaagctcttgtcatccaagctcaacgagcacatagggagtaacaatattttcctcacggttgctgacgctgtgcgtttctgcacaagaaagtcgatgcaagaaccatga</cdnaseq>

Protein Sequence

<aaseq>ISAMIGLTEAVAIGRTFAALKDYQLDGNKEMVALGTMNIAGSMT SCYIATGSFSRSAVNFMAGCQTPVSNIIMSAVVLLTLLVITPLFKYTPNAILGSIIIS AVIGLVDYEAVILIWKVDKMDFISCMGAFFGVVFASVEIGLLIAVSISFAKILLQVTR PRTVLLGNLPGTTIYRNTDQYPEARHIPGVVIVRVDSAIYFSNSNYVRERTLRWLTEE EEKAKAEGQSKINFLIIEMSPVIDIDTSGIHALEDLYKNLKKRDIQLILANPGSIVME KLLSSKLNEHIGSNNIFLTVADAVRFCTRKSMQEP</aaseq>

Gene Sequence

<dnaseqindica>1..24#112..238#328..614#714..904#1006..1091#1184..1260#1492..1635#atttccgccatgatcggtttaacggtaaggtattcaatataaaccgtgccctttcccatgcaacgcgtcttctcagatgtgaccttaatatttgtgtgggtgacttatcaggaagctgtggcaattgggaggacgtttgctgctctgaaggactatcaattagatggaaacaaggagatggtagcacttggaactatgaacatagcagggtcaatgacatcttgttatattgcaacaggtaactatatcaatttatcagggtcaatgacctgatggtacataatctgaaaatgcagtgctgaaacctgctgatttggtttgtatcaggttctttctctcgttccgcagtcaatttcatggctggctgccaaacaccagtgtccaatatcattatgtcagcagttgtgctcctgaccttgttggtcatcacaccactcttcaagtacacaccaaatgcgatcctcgggtcgataatcatttctgcggtgatcggccttgtggactacgaagcagtaattctcatttggaaagttgacaaaatggatttcatttcttgcatgggagcattctttggtgtggtcttcgcatctgttgagataggtcttttaatagctgtaagcactaaatctttgatttgactgccaacttgccaagttcttttccaaaggcatatagataagtgaaaattcacctaatttctgtgacgttaacaggtatcgatttcatttgctaaaattcttcttcaagtaacaaggccaaggactgtacttctgggaaaccttccaggcaccacaatatacaggaacactgatcagtatccagaagcaagacatattcctggggttgtaatagtgagggttgattctgctatctacttctccaactcaaactatgtccgggagaggtatagtctacatatatttattcagttttgcatttagaattgagatataatgaaatgcaaatgaacatatagcctcatgacatttatctggtccatttcagaactcttaggtggttgacggaggaagaagagaaagccaaagcagagggacagtctaaaatcaatttcttgatcatagagatgtcccgtaagttttagtgatttagtggtctcgtatcataattcataaattaagtttatcacttattgagctgatacaaatcttaatactttttgcagcggtcatagatatcgatacaagtggcatccatgctctagaagatctatacaagaatcttaagaagagagacattcaggtacgtactctgaaactaaaattatatcttccactgataccaaatacttaagatataatacattcagagtagtctcaaaaacatcatatgaagagatcaagaataaaaataccagttaacaattgcttaagaaaagaatgtacactggcaattttgtttcacaactcattgttcaaaacctacaattttaatgcaccgatgattaatatggaaatattgtgtatttggcagctcatcctagcaaatcctggatccatcgtcatggaaaagctcttgtcatccaagctcaacgagcacatagggagtaacaatattttcctcacggttgctgacgctgtgcgtttctgcacaagaaagtcgatgcaagaaccatgaagaaaaatagatgagagataaagagagagatgatgaacaatattatatagcatatgcgtatcatctacttatgatatagaggaatagatccatagtcaaatcagctggttcagtgaaatactggtgatagcatatacaattggaaatagttgtatggtgaatagggttgctataaaccaaaatgtcatgacagacaaatggaaggaaactgataataataggttaaggcaatccttcctaccctgaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0406400, RefSeq:Os08g0406400