Os08g0461100

From RiceWiki
Revision as of 20:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0461100

Description

Leucine-rich repeat 2 containing protein

Version

NM_001188682.1 GI:297726494 GeneID:9270368

Length

7451 bp

Definition

Oryza sativa Japonica Group Os08g0461100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22735372..22742822

Sequence Coding Region

22735372..22735515,22735596..22735670,22735743..22736004,22737533..22737825,22737856..22738059
,22738463..22739295,22739978..22740101,22742115..22742171,22742799..22742822

Expression

GEO Profiles:Os08g0461100

Genome Context

<gbrowseImage1> name=NC_008401:22735372..22742822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22735372..22742822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggtcccccaaaggagaagggcactgagaggctgattctgatccgtgggaagaagcagacccaacaatttgatttgcctcccaccgtcggcctcctcctcttttttccccaccgtcgagctccccaccacgccggcgaggaggcgggtggcggcggcggcggcgtgtccaacccgcttccacgtcccgcagccgcggcaggtttccaagcgagcaatggccgcctcgccgcccaaccgggagcggcggctcgcagcggcggagccggagccgccgccgccggacggtctgggtgcgctccccgtagaggtcctcgacaacatcctcggccgcctccacatctacgaggtggtccgcacctcgtcgctctcccgcgcgtggcggcgccgctgggagtcgctctccacctcgacctgacccgcagccccggcgtcgcggcgtccgacgtcgacgcggtcctcctccggcgctccgccgccgcccccgtccgcgccttccgcctcgtcgcgcgtgacccctcctggttcgtcgacgccctccacgactggctcctccacctctcccgcaacggcgtccaggccctggagctgtggttcccgacctacaacttccagctccattcctgcctcttctcctgccgcgagctcgcctgcctcgacctcgacagctgccgcctcccgcccgcacgcatggggtttgagggattcccgaacctgaagaagctacgcctccatgaagttaccctcccggagcacatgggaaatatgttggctgccttgatttccgcgtcgccattgctggaggaggtggagcttgtaagtgtgtttcttgtcggcgactaccctgacgaggagtgggtgattcgtgcgcccaatctccggaagcttataatggttgctgcgtttccttatggtggccgagtggaggagcttccacgactggagcaagggattctgtgcggccccaactacgccaagttcttgacggggatggctcatgtgaccaagctagagttcatgtgccactatatgttgtcaactgaagttgatgtgctggagcagctaccgttcttgtttgagaatcttaggagcttagtcattagtgttaatttctgtaaaatgtcccacattttatttatgttctgtctacttagaagtgctcctgttcttgaagaacttgatgttgtggtaatgttaaatgatcacttgcaaattcattatgccattacttgtttcaagggacaaagcaatgatgctcaggatattgatgcgaatgatgagttcttgaatgctcagccaacctatgatatgtttgcgaaacttcgtgttgtgcgaatgaagaaggttgcttgcctctgtaatgagatgcactttatggagtttgttctaaacaaagcaagagtactgcgagtgctatctgtttatccttcttctggcgtcacttgtagtaatgagcaggcttttataacagaacatccgagagtttcacctgatgcacaagtcatcttcatgaatagagaatctgcaaacaatggttacatggacactcccagtgttaattataagttggaaacaacaagaacaggcaactggatagatcttgcacatccttgcaaaattaatcggttggatctagatgccgtggatcagcataaacatattgaggagatgttgctaatacggcaaaagttactgaaagaacgcaaggagatggcacaggctcttcatgaagataagaagcttttgctaaactacttcgctgcagttaaaaaatacttcacttctaacctaaagtatctgtctgagcaattgaacatttccattccaccatttcctgagccttcgtcagtctcatcatcttcccatcctacctcgcccaggttggcagaagctcttaccgatcctgccagtcgtagtgctgacaatgtgcaagcagattctcgagctgaccaggtagccattggtgcttccagtgctcgtgccaattctcctaaacctgaagacaatgtctga</cdnaseq>

Protein Sequence

<aaseq>MAGPPKEKGTERLILIRGKKQTQQFDLPPTVGLLLFFPHRRAPH HAGEEAGGGGGGVSNPLPRPAAAAGFQASNGRLAAQPGAAARSGGAGAAAAGRSGCAP RRGPRQHPRPPPHLRGGPHLVALPRVAAPLGVALHLDLTRSPGVAASDVDAVLLRRSA AAPVRAFRLVARDPSWFVDALHDWLLHLSRNGVQALELWFPTYNFQLHSCLFSCRELA CLDLDSCRLPPARMGFEGFPNLKKLRLHEVTLPEHMGNMLAALISASPLLEEVELVSV FLVGDYPDEEWVIRAPNLRKLIMVAAFPYGGRVEELPRLEQGILCGPNYAKFLTGMAH VTKLEFMCHYMLSTEVDVLEQLPFLFENLRSLVISVNFCKMSHILFMFCLLRSAPVLE ELDVVVMLNDHLQIHYAITCFKGQSNDAQDIDANDEFLNAQPTYDMFAKLRVVRMKKV ACLCNEMHFMEFVLNKARVLRVLSVYPSSGVTCSNEQAFITEHPRVSPDAQVIFMNRE SANNGYMDTPSVNYKLETTRTGNWIDLAHPCKINRLDLDAVDQHKHIEEMLLIRQKLL KERKEMAQALHEDKKLLLNYFAAVKKYFTSNLKYLSEQLNISIPPFPEPSSVSSSSHP TSPRLAEALTDPASRSADNVQADSRADQVAIGASSARANSPKPEDNV</aaseq>

Gene Sequence

<dnaseqindica>7308..7451#7153..7227#6819..7080#4998..5290#4764..4967#3528..4360#2722..2845#652..708#1..24#atggctggtcccccaaaggagaaggtgcggcatttttacccctcccttttagcttggctttggcttttttctgcccctcagggcgcttctctttgcggctggtctcctcctccgtgtcttgattggatgatgatgtgtatgcacctgtttcagagatcttagtcctcttattcttactatcttcttctaagacccttcgccattttggttgatctttcagttccctccacatgtattccaatgtgaaaggtttttcattgttttctgacttaaaaataatatgagccttttccatgatcatatcatcagagtatccactcctaaaggttcttctaactcgagaataagctccacaaaatttcccaatttccttcttaacaccaccccaatgtgtcttgcattgcacggctatccttttgcggttacttctagatgtattgctgttaaactctgcagcaacagccttccaatagtattctgacttctgatcattaccttttatgggatccactgaattattcagccaagagctaaggagtcttatgttttcctctttagtccagttgactcttgtccctctcctccctgcctcttcactgttgtcacttgactcttcgatattaaccacattgttctcttcgtgtcttgcagggcactgagaggctgattctgatccgtgggaagaagcagacccaacaatttgatttggtgagtacacacaattttccggaggacgaaaaccttgaaaactcattggtgtagattgtaaccaatgtgcttgctgctgaaaaccgttgaagcttggagtagaattgccatatggttgatagttggtaggagccccaaaaggatggaagttctgaaaagtgggtgttgagaattgagaaaactgtgtttgagggaatattgaggggaattgtggagaagtggagttttggctaccatttccagaagcttggctttgggagccttggctaagcatgtgcataaaacctctgttgggggggatccatcttgtttgatgaaatacagaaaaaatgacttgagttgtgtttgtatttgtagaggatgaggttgcagcattgctgcaacaagttgcaacggctacaaatgtataacggctataactgctactctattattttagtgcaactgttagaaatcactgtgcacatgctatattttatttctctactgccggcagtagcgctactgcctggatgttgctattatctacccccacaatggctactacctatttggatgggtgcatttattgcttattacctgttttttgagcacattgtggataccctaacacaacagtacaattgattggtggggttcactcctaactctagaaagcaggaaccacttgtcattcacccaacaggaatacaacaaaggattgttgagaaattccgtatgatttaaattatagagtatagtttaccctttggctctcatgtagatgtagtgctttgtatggttcaaacgtatgaagaatttggaaaaaaaacttaccataagattccaccatatatgaaaaatatttcccatgtcttcttctcaaattcctaagcttttgtatgtgttctctgtccttcgtacacggtaagattgcaaaatcatctattttacaagtggaaaaagtccactttgactcccttaaatatcggccgaatctaattcgtatccctaaaccgcaaaaccagataggacgactcctccaactattgaaaccagtgcaatttgactccctcaacggttttgaaagcggttttggctgacgtggcgcttaagtagcggtgttgacctggccttcatcccacgtgtcgcttacgtggcattagaataaaaacaaaaaccaaaaatttgtaggaccaacatgtcattcaaacaaaaaggtgggacccaccgacatgtgggccccacatgtcaaccaccctctccttcccttcttcctcctccctccctctctctctcccttatatatctctctcccccggcctctctcttcaccttggccagcggcggctgtggagacggcggtggtcgatagcggcggaggtggggaacgacggcgacggcgaggaggtgggcggcagcgtgtccagtccgcttccgcgtcccggcttcggcagcggggtggggcagtcctccctaggcgtcgctcgtgtcagcatcgtctcgatccacagcgagacgagcagcgtcgggacgcggatgccgaggcggtccaaggcgaaagacaccgggtcggtgctgacgatgtcgtcgggggaaggggcgccggtaaccagggcggggatgtggtcgaagaagccgccgcacgcgtgaaccgcgtccacgccgtcgcgccaccactgtcgccgtttctgtgcttctctcctttccttctcctcgaagctatcggcatcatcaagcaaaacgccacccggagcaattcctcattggctcattgtgccactctccccctactaccgccagccgcctctttccccttgacgagcgtgccacccttcgggctccccaccgtctctgctaccccaaagagctgccgccctcgctggcttcgggaggccatcggagctcccctgcctccccatcccggacgagaccgtcgccatgctcgtctaccccaccgccggacgagcgcctccactagcctccccgcagtcttgcggcgaccaacttcccgtgcagcatcttcccccacagcctcccaccgtcggcctcctcctcttttttccccaccgtcgagctccccaccacgccggcgaggaggcgggtggcggcggcggcggcgtgtccaacccgcttccacgtcccgcagccgcggcaggttcggcaacgtggcggggcagtcctccctcggtgccgcccgcgttagcatcgtctcgatccacagcgagacgagcagcatcgggatgcggacggcgaggcggtggagagggcgctgggtgtggacaaggcgctcgggtggagcaccggccgtccgctccaactaccacccggaatcgccgcccctgccgccgattgtgccaagagagaaggtgaagagaaagggggagagaaagagagagaagggagagagaggaaggaagaagaagatagagaggatgacatgtgggccccacatgtcagtggggcccacaattttttaatgtgcgaatcacggatgggtcccacagatatttttttaattcagtgccacataagcgccacgtgagatgaagactaggtcaacatcgccacatcagcgtcacgtcagcaaaaccgccctctaaaaccattgagaaagtcaaattgcactagtttcaatattttggggagtcgtcttatctgatttgtggtttaggaatacgaattagattcgacgtatatttaagggagttaaagtggactttttcctttacaagttggcccaggcccaggcccaattcctttcgccgcttgctcttctaggctctatagctagagagatttcgttaggttcccgagcgcgcgaatttgggaaattctaggtttccaagcgagcaatggccgcctcgccgcccaaccgggagcggcggctcgcagcggcggagccggagccgccgccgccggacggtctgggtgcgctccccgtagaggtcctcgacaacatcctcggccgcctccacatctacgaggtggtccgcacctcgtcgctctcccgcgcgtggcggcgccgctgggagtcgctctccacctcgacctgacccgcagccccggcgtcgcggcgtccgacgtcgacgcggtcctcctccggcgctccgccgccgcccccgtccgcgccttccgcctcgtcgcgcgtgacccctcctggttcgtcgacgccctccacgactggctcctccacctctcccgcaacggcgtccaggccctggagctgtggttcccgacctacaacttccagctccattcctgcctcttctcctgccgcgagctcgcctgcctcgacctcgacagctgccgcctcccgcccgcacgcatggggtttgagggattcccgaacctgaagaagctacgcctccatgaagttaccctcccggagcacatgggaaatatgttggctgccttgatttccgcgtcgccattgctggaggaggtggagcttgtaagtgtgtttcttgtcggcgactaccctgacgaggagtgggtgattcgtgcgcccaatctccggaagcttataatggttgctgcgtttccttatggtggccgagtggaggagcttccacgactggagcaagggattctgtgcggccccaactacgccaagttcttgacggggatggctcatgtgaccaagctagagttcatgtgccactatatgttggtaaagattctggattttcatggcttaatgttttaattgattgctttttcataagtggttgaggacttattataccatgcctatgtagttgcttactgctaaattgctaattgcaaaagatagaaaggaaaagaagagaagaggctttttatattcatagaaaagacaatgttcagataacacttcattttagacagagcagttctacatcatctgagatgtataatatttccaacttcttcttcctgccacacattagaattaggaaatggaaaaacatgatatgcaacattactgtagaaatcaatcaatgcccactgaaacattactttttgtgcaaactcattgttcgttttttacttcatctgtattgtctaacaccttatttgttttcctttttcagtcaactgaagttgatgtgctggagcagctaccgttcttgtttgagaatcttaggagcttagtcattagtgttaatttctgtaaaatgtcccacattttatttatgttctgtctacttagaagtgctcctgttcttgaagaacttgatgttgtggtaatgttaaatgatcacttgcaaattcattatgccattacttgtttcaaggtaatgatactgtctatgtttccttcatagggacaaagcaatgatgctcaggatattgatgcgaatgatgagttcttgaatgctcagccaacctatgatatgtttgcgaaacttcgtgttgtgcgaatgaagaaggttgcttgcctctgtaatgagatgcactttatggagtttgttctaaacaaagcaagagtactgcgagtgctatctgtttatccttcttctggcgtcacttgtagtaatgagcaggcttttataacagaacatccgagagtttcacctgatgcacaagtcatcttcatgaatagagaatctgcaaacaagtaagcattctgattctaatattttcttgtgttgttccataaacccatcggtcactgtcttgtcctaaaccacaattaaatacagttatacttggcaatgccttctagtatacatatttggtcgcgctgttgaaatgtaaatgcactccagggtggacaccatggaaacctgcattcctagttaggtctgagtcttacaggaagttgttctgccccctcatgctccatgcttccacttcctccttcgacaatcgacaactctccagatctacagcatacctgtccatctcctactcatgcttcagctaaccagataaacttctatctgtttacatctgcaatctgtatatctcggttcttctgctctgctttccctttctgatcttttttatatcaagttccaaacatagagaattattcctatgcatctactctaactaggactctgtcactgaactctatagttccaagcaagtctgataagttcatcttttgatatattttagaactgtcactgaactctatagcttgttactacaactgtcattgaaatctataactgagtatttatttcatgcctttatccttgtactctgtgacaaccttgctggtatactatatgcacacttggtaagtaaactgatagtgtattcactgccttatattggctatagcttacattataaagttaagttggtccttccaacatattgaaaaatgtatttgtgcttctcaaaatctttagcagtgaattgcactcaagaaactaatttttttctttgaaactgcagtagtgcggtttcatactttcacgggagcctgtaagctccccagtatgtggattctcctctccttccaaagtgttgctgcgatgcatgatgaggagtaatggtacctcctcacaaataagaacttgaaaacacgctgcccctggccctgcgtgcttgcaagtaccattagagaagcttcacgtggtaccaccccacatatttcacttttacatgtgacaagggcctctgcaacaatggcaaggtggcgtggatgcatttgctaggaggtagtctcgattgacagttgataatctgcttcttagctggaagctgaattttgttttgaggtgaaaccggaatgagttgaaagattttgaatcaatttgtaaattgttgaatcaaactgaaaaaaaaatcttttaatatgagtgggatgacattgaataggggaaatgtttttcgtattgagttgaaaatttcttgaaccgagttgatgagcagctgcagattccaatgtggggacaaatcttaggacaggcagtgggagagggctactggggaagtggggagtcctcataacatgtgttggtgggacaaagtagtaaggcatgaatggtgtatctgtccccttcccacaaacactcttaaaatagttgctcatctttttttttcttgtatatttagcactatgaaatttgccttccccgtatccatctgatactgatattcttcttacttttaatctaacttaatgccagtggttacatggacactcccagtgttaattataagttggaaacaacaagaacaggcaactggatagatcttgcacatccttgcaaaattaatcggttggatctagatgccgtggatcagcataaacatattgaggagatgttgctaatacggcaaaagttactgaaagaacgcaaggagatggcacaggctcttcatgaagataagaagcttttgctaaactacttcgctgcagttaaaaaatacttcacttctaacctaaaggtagctaagattaaccatttttcattttttattcttcaattcattagttcttacttcctgatggaaatgcagtatctgtctgagcaattgaacatttccattccaccatttcctgagccttcgtcagtctcatcatcttcccatcctgtaagtaatattacttgcataccgaataccagttgtattcatcttgcatacttgtctcataatactttttgtcatcaaagacctcgcccaggttggcagaagctcttaccgatcctgccagtcgtagtgctgacaatgtgcaagcagattctcgagctgaccaggtagccattggtgcttccagtgctcgtgccaattctcctaaacctgaagacaatgtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0461100, RefSeq:Os08g0461100