Os08g0476300

From RiceWiki
Revision as of 20:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0476300

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001068575.1 GI:115476887 GeneID:4345829

Length

4393 bp

Definition

Oryza sativa Japonica Group Os08g0476300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23552006..23556398

Sequence Coding Region

23552142..23552279,23552369..23552650,23552745..23552838,23552942..23553053,23555780..23555927

Expression

GEO Profiles:Os08g0476300

Genome Context

<gbrowseImage1> name=NC_008401:23552006..23556398 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23552006..23556398 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgaggtcagtgtccgggtccaactcgtcgaggggcatcgccgccgtggtcggcgtcggccccaggctcggctccgccgtggctcgcaagttcgcctccgagggctacaccgtcgccatcctctcccgcgacctcgagaagctgtcgcagctggcggaggagatcgcgcaggaggcgaaggcgcaggtgttcgcgctgcgggtggactgcgccgacgcgcggtccgtgcgcgaggccttcgaaggggtgctctcgctcggccccgtcgaggtgctcgtctacaacgcctgcgagccacccgccgacggcgacggcgacgcctccccgcgcccgactcccttcctcgccatctcccccgacgccttccaccgcgccctcgccgtctccgccgccggcgccttctactgcgcccaccaagttataccggggatggtcgagcggggcaggggcaccgtcatcttcaccggctcgtcggcgtcggtcaccggctacgccggctactccgatctaagctgcggcaagttcgcgctgagagggctgtcccagtcgctggccaaggagttccagccggccggcgtccacattgctcacatgatcatcgacggcgtcatcggcgaacccaggtcagggagggggaggtgcggcggcgagacggcgtcgtcggcgggggcggacccggacgcggtggcgcagagctactggcacgtccacgcgcaggacaggagcgcgtggacgcaggagatggacatccggtcgccgtcgctcatgtag</cdnaseq>

Protein Sequence

<aaseq>MLRSVSGSNSSRGIAAVVGVGPRLGSAVARKFASEGYTVAILSR DLEKLSQLAEEIAQEAKAQVFALRVDCADARSVREAFEGVLSLGPVEVLVYNACEPPA DGDGDASPRPTPFLAISPDAFHRALAVSAAGAFYCAHQVIPGMVERGRGTVIFTGSSA SVTGYAGYSDLSCGKFALRGLSQSLAKEFQPAGVHIAHMIIDGVIGEPRSGRGRCGGE TASSAGADPDAVAQSYWHVHAQDRSAWTQEMDIRSPSLM</aaseq>

Gene Sequence

<dnaseqindica>137..274#364..645#740..833#937..1048#3775..3922#aaaaccaacggcgcgccgccgccagacgaccggacagagtgctcgctcgctgctgtctcttcgagcttgctttgcgtttgcgttgcgttgctttgctcgatcgatcgatcgatcggtcactctctgtcttccccatatgctgaggtcagtgtccgggtccaactcgtcgaggggcatcgccgccgtggtcggcgtcggccccaggctcggctccgccgtggctcgcaagttcgcctccgagggctacaccgtcgccatcctctcccgcgacctcggcaagctcgatctccctcttcttcttcttcctcctccgttcttgcatgatggccggtgatggtggatgtggttgtgtacgttggtgcagagaagctgtcgcagctggcggaggagatcgcgcaggaggcgaaggcgcaggtgttcgcgctgcgggtggactgcgccgacgcgcggtccgtgcgcgaggccttcgaaggggtgctctcgctcggccccgtcgaggtgctcgtctacaacgcctgcgagccacccgccgacggcgacggcgacgcctccccgcgcccgactcccttcctcgccatctcccccgacgccttccaccgcgccctcgccgtctccgccgccggcgccttctactgcgcccaccaagtacaatccatcaatccacatctctcctctcgatcatatcttcgattaatcagtaatcacccatggccatgccggccactgatcgatcaaacaggttataccggggatggtcgagcggggcaggggcaccgtcatcttcaccggctcgtcggcgtcggtcaccggctacgccggctactccgatctaagtaagctgatccattcactggctcgatcgatcacacgtaattaagcaaccggattaaattcctggatccgagtcatgtttgcgcgcgagtaaaatgcatgcaggctgcggcaagttcgcgctgagagggctgtcccagtcgctggccaaggagttccagccggccggcgtccacattgctcacatgatcatcgacggcgtcatcggcgaacccaggtcagtgaaccaaaccaactcatgatctcaatttcactaaccaatacttcaagaaatcaagattacggacgtctttgcttgctagatactaatataattataaagcataaatgcataagcttattatagctttgattcattacgggtagtcaaattgcgggtaattagtttgggcaagtgcgagtggaatattgtccctagtgagctatgacaagaagaagatataccaaagtttcgggagatctctcaatcctatcgttcgctacctcgcgaaggtcggtggtcctgtggcgtcgtcgcgaacgtgtagatcagatcagctcatagggcattttcaggaaaggggaacagaggagaaaaaaaataaaattttgcgtccctctcataaatatgcaggaatacattccgcaatgatggcacggatatatacgacttccgtaataccggccactgaaaaacatgtgcgagctgcttctttcggcatcattccttgaaccctagaaagaagatagttcagtcgttcggtcaatgcgtatattttataatagatagtatcgaaataatttgttaatatatattttagaaaattgacttgaacaagtacgtaagcataccgatattttgttaaaaccgtaagtatgcgtaccgatatatatgccctcatcgggaatatgcaaagcgatggtatatgatagctatatatcctcctgatcaaccaacgagaccacttgtacaacatatcatatatatgatttgttgcattgtattgtgttggatttttttcttaaatagttatatctatctatctacttttcagaggcataaaaaaaagtcaacatattctctcttcacgtttggttgtctagatttttccacattaattgaaaaaaaaagaaaaagatttgcatcaattgatcatggagggtctaaatataaaaatatttgcatattagaccataatgagattagattataatggtacagcttggttcgcttttaaaactagcccgtgtagaatttcagggggaaaaattcaataagaacttaaaagtttccccacattccagatgaactttagacctttagtatattgcctttgttcttttcgaaaactctatcacttacaagaataacaacttttattcatgctcaaagacatttacaataggaagtggtctcatggtatgctcttgggaggtgcagcagcttaagcaagtattagtgatactatacttggacaatgcattggaacttaaatggatgtaaccgtaattttgcacttttatgccttgttccttttcactacagcctataatcttttatatttactttctaaagtgaactatcccatacaaacactatcaacataaaacagtttataaatatgctcctaccctacctgtcagccactcgtccatcatttcagcttcccacactcccatctctctccccccaccaatttctttgatcttcctccattccataccgacacaacaatatacatctttctcgatgccagcactaacaacacgagcctagcagaaagccaccttaatgagggatcgaccagcctcctacctctctatattgaaaccttaatttgggatttgtcaactacccaatgcctcttccctctctctttcccatctgtagttgcaactgtgtactccgctctattttgtaacggacaggatccccttctctccatgaacccaagcctcaacttcatctggagaagccatagcgaagtatggtgaaactgatctagatccagtatcgtcacaaaaatagcagctaaaaacattggtattatggatcaacgccatgaaaacaacctccctctccctttgtccacagcgagctacaacaattatttttccaagaaaaatagtacaaacacaagcaccaacatatatacgtgtaaactcatcgctataaacactctagaagtatatatgtccgagagactgagctagcacttccataatttagtgataagctattctttatgattctttttcaggctttttcttttctttgcagcaacatgcatgcatcagacaacatttctttttcagttctcgtgtttattccgtaccatgatctcgcttcactgcacaaaagatttccatgccctacgagagcaggacacggcgacaccatttcaaacccatcgctatgctgagttgtaaatgctcttgtctactgtccgatccaacgcctcccttccattcatggcatctccaaaaaaaaaaaaaagcaacaaaatatattctctttctagagtcatagtccgatccgacctgttcgatctcggaaactttttaaattactacttttggatcataaatcgggttggatagttgggcacctggcccaaccaccaactgccaccttatgctgcttctcccctcggctcgacacgttacgcgcggtccaacgttttcgcccggaaaaaaaaagctctcatgccgtccttgtgacctgccgcggcgccggctgccgacaccgcacgcatcggcgagcgaatcgctcgctcgatcgcgcgcacgccgcgtgcgatacgctttttcgcgctcgcgctccggcgctcggcgagcgcgcaccgagaccacgaccatcgcggctagcttttttttacagtgtgggtgggttaatcgcggggcgcgatcgagtgatgatggaagcgtacgtgatgttttcgtgtgtgtttttgttgcacgcaggtcagggagggggaggtgcggcggcgagacggcgtcgtcggcgggggcggacccggacgcggtggcgcagagctactggcacgtccacgcgcaggacaggagcgcgtggacgcaggagatggacatccggtcgccgtcgctcatgtagtcggccggccgatcggggaggtggagaggcatgcactgtagctccggcggcggaatctctactgttgccaaggaaggaaagaagaaaaaaagaaaattcattgatcgtgtcatcgtgtggtgtggtgtgcgtgtgcgcggctgcggaccgggcatcgtgtccccgttccgcgtcgcatgtcttctttttttcgcgctgcgtgcgcgcgccgcttggcgcttcgcgcgcctaatttttagtgtgtggttgatgcatcatccgtccgccgtccatcggcagcatccagcagccggtgcacggggaagttgccgacgacggcgacctgcaaaaattcatgtgatttttctgtacggttttctataaatgtatagtagtattatgtctcgttttatgtggttttctgtacggttttctataaatgtatagtgtgtctcgttttatgcatggttacctgcacttgattgcatgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0476300, RefSeq:Os08g0476300